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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:409231..411501- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041857 ID=XLOC_041857|Name=XLOC_041857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2271bp|location=Sequence derived from alignment at sc0000251_pilon:409231..411501- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAACATGATTTACAACAGACAGCAAGAGATGTCTCACTTTGTATACG
CTATCTTAATCTTTTCACGTGTTGCCTGACGCTTGTTCTCATCTTCTGGC
TGGTGTAAGTATAAAATACTGACCAATACCTTCCCATTATACAACCTCAG
GTAGTCAATGTGTATCACCGATGAAAATTTCAAAAGTAGGCTAGCGTGTT
GACCATGTGGGATAAAAGGAATCATTTTCAGCTAACTACGCTTAGCCAAT
CACTCAAAATCATCATTTAAACCTCAGACCCGCTATTCTAACGTTCGAAT
CTGCAAATACCAAGCATATATAATGTTAAGGGTGTTGAAACAACTTTGGT
GTGAGACTGGACCCCAATTAGAACTCATATGTACTCATTCTAATTTATTC
AACAGTCCTTTATCCGAGAAACGTTTCATCCTTCATCGATTTTTGATTTT
GGGTTTGGCATTGCACGATGTCTTCTTCATTCTTCAAAGTCGATACATAT
TCGATCTCGAGAAACAGGTAAAAAGTGTTTTTGCTGTAAGCAAGAAAAAT
CCAAGGAAAAAACTTCTCAGATATTTTTTGAATAAATCTACATTACTAAA
TATGAAATTGCCAAAACGGTTCACTGGTTCACTAACACCTTTCTAGGACA
TTTCACTCTCTATTATTCGAGCTCTCCTTAGCCCGAACAATTGACAGTTT
CTTTTGTAGTCCGAGTTATGGAGAACCGTTTTATGACCAAAAAGATTGAT
TGAACTCTTTTTGGTCGAATGGTGAAAAGCTACCACTTCTAAATAAGTCG
CGTTGGAAAGATGAAGTTTCTCAATAGATTACAGTTTTTCAAAAAAAACA
CTACGACTTTTTTTAATGCCCTGTGTAAATTAAATAATATTTTTTCCTTT
CATAGCAACACTGTTCACGAATGTTCATTCTGTCCACTTATTTCCACGTG
GCAGTTCTTCTGGTGATGTTTAGTGAAGGCTTCTATCAATTCCGTCAATT
CTATTTCATCATTGTGACAAAACATAGAGAACCTTATTACATTGTTTTCT
CTTATGGTAAGTTAGCTCACACGTGCTCATAATACTTTCATTCCAACTGG
GATTCTGATACTCTCGAAATCACTTTTTTTAAACACCGGCCATTAGGAGA
GATCAATTCTTGTTGTAAGCTAAACAGGTGACCCTTAGATTGGAGAAACT
CCGGGGTACTAGGATTACGAAATGACAGGAGGGGGTGCCGCCCGATTTTT
GAGAATCGGAAATTCTAGGGTCTAAAACCGAGGGGAAAATCCGAAATTTT
GTGACCCTTACTGGAACTTTTCTCCCCAAATTTTACCTTTTTAGAAATAA
ATATCAGTTTATTTTTCAAACGGCTAATAACAATACCATAATGTTAAAAA
TTTCCGCTCATATAGCATGAAAGTGTAGACAATACTTTAAACTTTTTTTG
CAGTTGTGGCAGCATTGATTGTATTCGGTGTATTTTTGCCAGGAATGTAT
TATGATACAGATACTGAATAGTAAGTATTTATTAAATCTGAACTTTTTCA
GGCCCGGAGAGCTGCTGGGAACTAAGAGCTTTCCAGAGCTCTCGTAGTAG
ACGATGCTATTGTCCGTCACAGGGAAGATATATATGTACAGTCGTAACTG
GCGGCATACGGAAAAATAGCCTGTACCCTGCTTGTAGCAAGGAGCATTAA
AGACTATCTGACTATGCCAGACAGCGTACATAAAGATATCACTCGATTCA
ATGAGGAGAAGGGTTTTTAGACGGGGGAGTTGGGGTGACCTTCTTCGGCT
TATTATCAGAGGCAGCTGTGATTTGCGAATGTAGTTATACAAAACTTTTG
TTCAAACTTTTTATTACAGTTGTTGGAGCCGATATTATTGGAACAAATAT
CGATGGGCGTTGAATTCTATTGTCATTATTGTCCTTTGTGTAAGTTTTGT
TTTGTTTCATAAATGCTGAGAGTGAACTGGAAACACATTTTTCACATCCT
TCACGTATGAATTGGATTTTGGCGAAAATATTTTTTGCAAGCAGAAAAAG
CCCCGAAATAATTTTTAAATTTGGAGTGGAACTTATTTGGGCGGTGCATC
AACTTTTTTGTTATTTTTGCAAGAACGTATTCGCTAAAAGTAAGTTCCCT
TTATACAGTATTTCTTTTTTGACCGTCATTTCAGTTAAATTTCTTGATCA
TGATCTATATGATGAATTTAATCGCATCCAAATTGAGAGCTGACAAAAGA
CCTGGCGTCATCAAAGCCAAG Coding sequence (CDS) from alignment at sc0000251_pilon:409231..411501- >XLOC_041857 ID=XLOC_041857|Name=XLOC_041857|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1182bp|location=Sequence derived from alignment at sc0000251_pilon:409231..411501- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAACATGATTTACAACAGACAGCAAGAGATGTCTCACTTTGTATACG
CTATCTTAATCTTTTCACGTGTTGCCTGACGCTTGTTCTCATCTTCTGGC
TGGTCAAAAACATGATTTACAACAGACAGCAAGAGATGTCTCACTTTGTA
TACGCTATCTTAATCTTTTCACGTGTTGCCTGACGCTTGTTCTCATCTTC
TGGCTGGTTCCTTTATCCGAGAAACGTTTCATCCTTCATCGATTTTTGAT
TTTGGGTTTGGCATTGCACGATGTCTTCTTCATTCTTCAAAGTCGATACA
TATTCGATCTCGAGAAACAGTCCTTTATCCGAGAAACGTTTCATCCTTCA
TCGATTTTTGATTTTGGGTTTGGCATTGCACGATGTCTTCTTCATTCTTC
AAAGTCGATACATATTCGATCTCGAGAAACAGCAACACTGTTCACGAATG
TTCATTCTGTCCACTTATTTCCACGTGGCAGTTCTTCTGGTGATGTTTAG
TGAAGGCTTCTATCAATTCCGTCAATTCTATTTCATCATTGTGACAAAAC
ATAGAGAACCTTATTACATTGTTTTCTCTTATGCAACACTGTTCACGAAT
GTTCATTCTGTCCACTTATTTCCACGTGGCAGTTCTTCTGGTGATGTTTA
GTGAAGGCTTCTATCAATTCCGTCAATTCTATTTCATCATTGTGACAAAA
CATAGAGAACCTTATTACATTGTTTTCTCTTATGTTGTGGCAGCATTGAT
TGTATTCGGTGTATTTTTGCCAGGAATGTATTATGATACAGATACTGAAT
ATTGTGGCAGCATTGATTGTATTCGGTGTATTTTTGCCAGGAATGTATTA
TGATACAGATACTGAATATTGTTGGAGCCGATATTATTGGAACAAATATC
GATGGGCGTTGAATTCTATTGTCATTATTGTCCTTTGTTTGTTGGAGCCG
ATATTATTGGAACAAATATCGATGGGCGTTGAATTCTATTGTCATTATTG
TCCTTTGTTTAAATTTCTTGATCATGATCTATATGATGAATTTAATCGCA
TCCAAATTGAGAGCTGACAAAAGACCTGGCGTCATCAAAGCCAAGTTAAA
TTTCTTGATCATGATCTATATGATGAATTTAATCGCATCCAAATTGAGAG
CTGACAAAAGACCTGGCGTCATCAAAGCCAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:409231..411501 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-591:88 |
| Aaloc | 436-504:402 |
| Aaloc | 370-432:817 |
| Aaloc | 217-366:1367 |
| Aaloc | 106-216:1866 |
| Aaloc | 1-102:2272 |
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