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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:319543..322904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041854 ID=XLOC_041854|Name=XLOC_041854|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3362bp|location=Sequence derived from alignment at sc0000251_pilon:319543..322904- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGTCTGTCAAAAAAGTAATGGAGGAATCCCGGAATCGGGGACT
GGAGGAAATTGACCTTGTTGATAAGGGAATAACAAATATTGCTGATGTAC
CATATCTATGTAAGTCTTTTTCATTATTATTCTAACCTTTTTGTGTGACC
CAAAGTGCTTAGGAAAATTAGTTTAGAATTTAGATTTATGATGGTAGACT
TTTTCAATCTGAGAATTTATTTTATTTTTTTATTTTTTGCAAAAACATGG
TCAGCTGGAAAAGATTTTGCCAATCCTTTCAAAATTGAGGTTCAATAAAG
GAATAAGTTCAACCAAGCCTTTTTATATGACCTAACAGCCAAAATAATTT
AGACCGATACTAGTTTTTCCAGCTTTTCTAAAACCATTTTTCTCCATTTT
AGTGAATATGAGAAGTATTACAACATTAACTCTGAGTCACAATAGAATTA
CAAGTAAGTTTTAATTGTTTTACTTTTTCTTATCAAGACGGACATCGCTC
AACGTATGAAAAATAAAATCACCAAAACTAATCCCTGACATTATATTGTT
ATTTACTTTTTGCAATAATTTCTTATCTCTTCTTCAGTCCAATGTCATTC
TAAAATAATCAAATTTCGTTATTATTTTCAGAATTACCAGATGCAGTCGC
CAATCTTGCAAGTTTGGAAAATTTGAATTTATTCAATAATGACCTAGAGG
TGTGTATGAATTTGTTATTACAGAAAACAAACAGTCAATATTTTTCATTT
CTCTATCCATCAACGATAGAGAATGTGTCTTGAAGAAGGCTGTAATGCAG
AAATACTGATGTGAGAGATGTGTGGTACTTTCGACCTTAAATTATAAATA
ATGATACTGAGTACTCTTGTGTTGTTTATGCACTCATTAATTTTGTGACA
TATACTTAACATAAGCCATGAGCCACAGTATGTATTTTTATAGGCAGGAA
TAGATAACATACCTGAATATAATTTTTATTGATAACATAAATTCTCTCTC
CTCCCTTTTTCAGACTCTTCCACTGACGATATGCAATCTACCAAAATTGA
GATTTTTGAACTGTGGGTAAGTAACTATAGATAGAATTGAGAAACAAATT
TTGTTTTATTACCATTGCATTTTCTCAGAATTATTGTCGTTGCTTTCCAA
TATCTAAACTGATACGTCTTCCTTGTGTTAAAAAAATACTTTTAAACTTT
CTGACAATATCTTTTAATATTGATCTTAAATTTTTTCAGAATCAACAAAT
TACAGGAATTACCAAAAGGTTTTGGTGCTTGCCCAACGTTGGAAGTATTA
GATTTAACTTACAATAATCTAACTGACAGATCCTTCCCTGGAAACTTCTT
TTACTTAGGTAACTTTTACTCAGTATGAGATCAATACAGTTTCATTTGAA
TCGATTTTCAAGCTGATATTCTGTTTCTCTTAATTTGACAAGATTAATAA
TTCCTTCAGAGTCGTCTGGTGTTATTTGTAGACCCTGGTAGACCGAGGAC
CTCAGTTTTCTTTTGAGCACTTGGAATTCATATGGAAACTAAGTAATAAT
TGTTTAAGTATGCAAGTTAATATAATAGGATGAATTAGTGTATGACTTTA
AAAACCGTCCTAACTCATTGTGTTAATTTATCCAGAAAACTTTCATATAA
ACCACTAGGCCAATGAAAAACAAAATAATACAAAAGAGCAGAAGACGTGT
CACATTTTGAAAACAATTGTTTTTTTTATTTTCTTAGCACCTCTCCGTGC
TTTGTATCTTGGTGACAACGAATTCGAAGTCCTTCCACCAGAAATCAAAA
ATTTGGTGAATTTACAAGTGGTAAGTAGTTCTCCACAGTGAAAGAAAGTT
AAAAAAAATGTGTTGGCGGTCATTGTTGAAATGTCAAACAGCAACACGAT
CGAGGCTGTTGTAACAACATCTCCATCATCAATACGTTTAAATGATGACA
CTGAAATTCTTGGTTAAAATGAAATTTATTTTCATATATAATCAATGATG
TTTTTTGAAACCATTATTTTTACAGTTGGTGGTCCGAGACAACGATTTGA
TTTCCATTCCCAAAGAAATTGGAGAGTTGACCAAACTAAGAGAACTTCAT
ATTCAAAACAATCGATTACAAGTCCTTCCACCTGAACTGGGTAAATTCAT
TAAATTCTTGTTCAGGGGACGAAATCATTGAGTATGTTGGTATAACCATT
GAACTTTTCATTTGGATAGTCGTTAACTTCTTTCAAGTGGAAACCTTTTC
TTTTCTCTATCAAAAATATAAAAATTGAGTTTTAGTTTATGATATTAATA
AAACGGACATTAAACCAGTGTGTTTTGGGGTAAATACTCGTGTCCAGGAG
TGAATCTTTGTATTCAGGGGTAAATACAGTGAAATTTTTGTGTCCAGGGT
ATATCCTTATGCTTAGTGGTAAAACCTTGTTTGGTAAATCCTAGTGCCCA
GGGGGAAAACCTTATGTCCTTGGGTATAACTGGTCTCGATTTTTTTTGAT
TACACAAATAACATGTCTAACTAAAGTATTCTCCCTTCCTCCATCTTCAA
GCTGGAGGGAAAGTCTAAATTGCTCAAAATTCCAGCTTGGACTTCTGTTA
AATTTGTGGTCTTGAACAGTTGTACCAGAAAAGTAGTGCCACTGATATTA
TTGTATTCGTTCATGTGTATTCTCATTAATCCAATCAAACCCAAAAAGAT
TTCAAGACTGGACTGCTTATTCAGGGCTTATCAGTTTGTACAATCAAAGA
AAAGTAAATGGTTGGCACAAAAAAGCTGTATTATATGTTAATGTTTATCA
AACTAATTGTTGTTGTTTTCTCTCTTTAACTTTAGGATATCTTGATTTGG
TTAGCCCTAAACACATGTTACGTGCAGATAACAACCCTTGGATAAAGGAG
ATTGCCGACCAATTGGTTCTTGGAACTTCACACGTGTTGACCTACTTGAG
GACCACTGGCAAAGATGGCTATGAAGAGTAAGTTTTATGCTTTCGACTTT
GCATTCTTTCGTAAAGTTTTTCTTATTGGTAGTGGGTTCAGGTGGGTTGA
GTATAATATTTCCCTTTTTTAAGGCTATAGATAAATATTATAGAAGCACT
GTCAGAAGCAATGTTTTCAAACATCCTTCTCTCTTCTGCCACCATACATT
ATACCCGATTAGATATTTTGTTTCTTTGGACTTAATCTAATTGTAAAGCA
GAATTAATTTTTGGATGTGCTCTTTACAATTCTAAAGTTAATAAAACACG
ATCATTTTTCTTATTTTACAGGCGTTACAAAGCGGTGAAAGCGATGAACT
CCGCCCCACCGCCCAAGAAAGAACGTGAAAAAACATTGAAGAAAAAGAAG
GACAAAAAATAA Coding sequence (CDS) from alignment at sc0000251_pilon:319543..322904- >XLOC_041854 ID=XLOC_041854|Name=XLOC_041854|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1662bp|location=Sequence derived from alignment at sc0000251_pilon:319543..322904- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAAGTCTGTCAAAAAAGTAATGGAGGAATCCCGGAATCGGGGACT
GGAGGAAATTGACCTTGTTGATAAGGGAATAACAAATATTGCTGATGTAC
CATATCTATATGTCAAAGTCTGTCAAAAAAGTAATGGAGGAATCCCGGAA
TCGGGGACTGGAGGAAATTGACCTTGTTGATAAGGGAATAACAAATATTG
CTGATGTACCATATCTATTGAATATGAGAAGTATTACAACATTAACTCTG
AGTCACAATAGAATTACAATGAATATGAGAAGTATTACAACATTAACTCT
GAGTCACAATAGAATTACAAAATTACCAGATGCAGTCGCCAATCTTGCAA
GTTTGGAAAATTTGAATTTATTCAATAATGACCTAGAGAATTACCAGATG
CAGTCGCCAATCTTGCAAGTTTGGAAAATTTGAATTTATTCAATAATGAC
CTAGAGACTCTTCCACTGACGATATGCAATCTACCAAAATTGAGATTTTT
GAACTGTGGACTCTTCCACTGACGATATGCAATCTACCAAAATTGAGATT
TTTGAACTGTGGAATCAACAAATTACAGGAATTACCAAAAGGTTTTGGTG
CTTGCCCAACGTTGGAAGTATTAGATTTAACTTACAATAATCTAACTGAC
AGATCCTTCCCTGGAAACTTCTTTTACTTAGAATCAACAAATTACAGGAA
TTACCAAAAGGTTTTGGTGCTTGCCCAACGTTGGAAGTATTAGATTTAAC
TTACAATAATCTAACTGACAGATCCTTCCCTGGAAACTTCTTTTACTTAG
CACCTCTCCGTGCTTTGTATCTTGGTGACAACGAATTCGAAGTCCTTCCA
CCAGAAATCAAAAATTTGGTGAATTTACAAGTGCACCTCTCCGTGCTTTG
TATCTTGGTGACAACGAATTCGAAGTCCTTCCACCAGAAATCAAAAATTT
GGTGAATTTACAAGTGTTGGTGGTCCGAGACAACGATTTGATTTCCATTC
CCAAAGAAATTGGAGAGTTGACCAAACTAAGAGAACTTCATATTCAAAAC
AATCGATTACAAGTCCTTCCACCTGAACTGGTTGGTGGTCCGAGACAACG
ATTTGATTTCCATTCCCAAAGAAATTGGAGAGTTGACCAAACTAAGAGAA
CTTCATATTCAAAACAATCGATTACAAGTCCTTCCACCTGAACTGGGATA
TCTTGATTTGGTTAGCCCTAAACACATGTTACGTGCAGATAACAACCCTT
GGATAAAGGAGATTGCCGACCAATTGGTTCTTGGAACTTCACACGTGTTG
ACCTACTTGAGGACCACTGGCAAAGATGGCTATGAAGAGATATCTTGATT
TGGTTAGCCCTAAACACATGTTACGTGCAGATAACAACCCTTGGATAAAG
GAGATTGCCGACCAATTGGTTCTTGGAACTTCACACGTGTTGACCTACTT
GAGGACCACTGGCAAAGATGGCTATGAAGAGCGTTACAAAGCGGTGAAAG
CGATGAACTCCGCCCCACCGCCCAAGAAAGAACGTGAAAAAACATTGAAG
AAAAAGAAGGACAAAAAATAAGCGTTACAAAGCGGTGAAAGCGATGAACT
CCGCCCCACCGCCCAAGAAAGAACGTGAAAAAACATTGAAGAAAAAGAAG
GACAAAAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:319543..322904 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 742-831:91 |
| Aaloc | 601-738:526 |
| Aaloc | 484-597:1338 |
| Aaloc | 403-483:1624 |
| Aaloc | 283-399:2123 |
| Aaloc | 229-279:2350 |
| Aaloc | 163-228:2730 |
| Aaloc | 112-159:2959 |
| Aaloc | 1-108:3363 |
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