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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:156422..159713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041851 ID=XLOC_041851|Name=XLOC_041851|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3292bp|location=Sequence derived from alignment at sc0000251_pilon:156422..159713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACATCACTGCTCCTGTTATCACTGCTTTTCGTGGTCACAACAAG
AAGCGCTTATGGGAGCTGGCACAAATACAACCACGGTGTTAAAAACTTGA
TCAGTGGAATGGCATCCATGCCATCGAGTACGACAAAATTGTTCGGTGTA
GGGCTCAATGGACATTTATGGGAAAGGATTTGGTCAAGCAATTCTTGGCA
TTGGGTAGATCATTGGGTGCCACCCGGCATGCTTTTGAGCGGCGATAAAC
TGGAATCAACTCCTTGTGTCATAAGGGATGGAAAGTTGTTTGTTGTTTCC
AAAAAAGGTACAAATCAATTCACACATATACTTTTCCTTCAATAACTCCT
TTAAATATTATGACTATTGAATTCAAGATAATTTTTCGGGTATATAATAA
TATCATGTATTTCCAAGGTCCACAGTTAACTGGGTCTGAAAACCGTAGAT
TTTTTTTCAAGATGATTCAGCTCTTCGGTCCGTGTCCACTATATTAAAAC
GATCTACAGCTCAGTTAATTGCAAGTGTAATGTACGCTTCACAAACTTTT
GTTTGCCACGTGTTGTAACCTAACTGTTTAGATAACTATATTTCTGATCA
ATTTGATTGACAGGTCGATTGTGGGAGAGACATTGGGGTAATGGACAATG
GAATTGGGTTTTTCATGGCAGACCATTGAATTTCAACAGACAACGCGTTA
ATCTGGATCCGACCAAATGTGTAGCAAGTAGAGGTAAGAAGGCTGAAATT
TGACGATTGATAGACTTTTATAGCGCTTCTTACTGCCTTGTACCTTGTAG
ATGATATTCACGACGTAATGTTTTCTACAGGAACAGTCCGGTTTTTGCAA
GTAGTGACAAATTTTAAACAATTTTCACTCTAGCTTACATTTCTTAAGTA
TAAGTAAATCTGCGACCGCAGTCGGAGGCAACCCGAAGGCTCCTCTTTCG
ATAGCTATCTACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGAT
TGCTCCACTTACCCTTGATCCTTCTCTTAATTGCTGAGAATCAAGCAGAA
TCAACCTTGCGAATCGTAGCCGGATGCTCTACCACTGCACTACGATCGCT
ACATAAAGACTCTTTAGAACTATCACTACCCGCTTAATTCTAATATCAAT
TTTGTTGATTAAAGCTTACTCACAGATAAAAACCTACATACAACACCCTC
TAAGAAGCTCAAACAAAGTCGAAAATTTTACTACTGTGGCGTCAGTTAAA
AAATCCAGAGGTTTGAGTAGTATTGGAAAACCACAAATTATAGATTTTCC
ATCGTCCTAAGAATGTGCTTTGGATATCAATGTGAAAAATGAACATTTAT
CTAAATTATTCTACCGGTATACGCCAGAAACAATTTATATAATAATTGTA
TGACCTATTTTATTTAGCTTGCGCGTCCTTATGTTTCGGCGGGTTATTAT
TCTGTAATACCCCGCTCAATTTGTAATACCCCTGTGAAAAGTTTGTATTA
TCCCCCCTCAGTTAAGTTCCTTGCTGCTATGCTCCGGGTGTGTCGCGTAA
AGAAAAAAGAAGACGTTGCAGTTGGGCGGCGAGACAACCGAATGTTTTGA
TTTTCAATTCGAATGTTGTTGGTGTTGATATATGAGCAGGAAATGAAAAT
GAGAGAAAGAACTTCGTCGAAAGTTCGAGGAAACTTTTTACAAAATTTAT
AGTTTTTGTTTTTACTTTAGTGTAGTTTACATAAGTTACGGATGCTATAA
CGGCTATAACATCAGTTGTAAGGCTTTGAACTGATTTTACTATTTTGTTT
ATTTCACTTGGTTCTCATTTTACATATATACAGCTTCTTGCTTGGTTTTC
TCCAGGTAGGTACATTATGAAGGTGGAGTCTTAGTTTGTAGATCAAGAAC
TTCGAGGGGATAAACTCGTTGCACGGTCGTCTCAAAAATGCGGAACTCTA
GCATTGCAAACAAGCTAGAGGAGTAAAAAAACATAGAAAAAAATGTGACT
CGTAAAACGTATCGAGAGGACTTGAGATGCACTCTCCATGTTACTTGTTC
TTAGCTAAATAAAATCGGTCATACAATTAACCAGGAATGACATGATTTTT
CGTGAAATTTGGGATTAATACCCCTCGTATCATTTTGAAATACATTGAAA
TAGCCCTCACTTCGTTCGTGCTATTTCAAAGTATTTCAAAATGAAACTCG
GGGTATTAATCCCAAATTTCCCTCAAAGTCATATCATTACTAATACTAAT
TTACTCACGTAGGTAACAACATGGACCGAGTGTTTGCACGTGGTACCGAT
GGAGAGATATACCAGTTAAGATGGGTCCCTGGACTTTTTGGTGGCTGGCG
TTGGAGAGCTCATTTCAGGCCTAATGGTGCTGGAATCAGGGTAAGCTGCT
AATTTGTTTTTTCACATTTGGAATTTTTCTGTCGATTTGGTAAATAATTT
AAGGGTATTCGGAGCGAAACTTCGGCCACTAATCGATGTTCTGAGAGTTG
TAGTTCATATCTATTTGAACTGTGAGAGTTCAATTTAAAGTGTGTAACTT
GTATTCTAGTCTAGCAAGCTAGACGACTAATTTATACATATATAGTAGAA
ATAAAGCAAAAAGTAATGAATGGAACAATTTTAGTCTTTTAGTTTATACA
AACTAAATCCCGTATTATTATTAGTATTGGTATTATTAGTATCACACGCA
TTATAAACGACTCCAGTCTACTTGTATTCAGAAATATAACAACAATTTTA
TATTCATTATCCAGATCGTGAGTGGAGGATTCGATGTCGGCATGACCGGT
ACACATCTCTACGCCATCGCCAACAATGGTCAACTCTATCGTTTCCGTTT
GGGCCAAAACAACGCACAATTTTTGTGGGAAAATTCATTTGGTAGACCAT
CCTTCACCAATCTTCGAAGTCTTTCCGTTAGCACCAGAAATGGCGTGACC
AGAGTCTTAGTGGTGTCTGTCAGGAATCAAGTCCATACTTGGAGTGGTAA
CCCATTTTCCTTTTCTGTAGGCTCTCGCCCGAACGGTGTCCACTCATTTG
GGCCAGCCATTATCCTCTCCAAGGAGTTCCAGCATACTTGTAGAGGAAAC
GCCGAAACGATGGTCATGGTTAGGACACCGCACACAATATACTCCATGAC
CCTTCCAGGCTTCGCCTTTACACAAGTCGGTTCAAATCACCGCCCTTTTA
TAGATGAGGTGCCAGCCGTTCTGCAAAACCCGAGATGCCCAAAAGTCTTC
GTTGTCACCAACCATGGTGAACTTGTAGAGTTTTTTGTTTAA Coding sequence (CDS) from alignment at sc0000251_pilon:156422..159713- >XLOC_041851 ID=XLOC_041851|Name=XLOC_041851|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000251_pilon:156422..159713- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACATCACTGCTCCTGTTATCACTGCTTTTCGTGGTCACAACAAG
AAGCGCTTATGGGAGCTGGCACAAATACAACCACGGTGTTAAAAACTTGA
TCAGTGGAATGGCATCCATGCCATCGAGTACGACAAAATTGTTCGGTGTA
GGGCTCAATGGACATTTATGGGAAAGGATTTGGTCAAGCAATTCTTGGCA
TTGGGTAGATCATTGGGTGCCACCCGGCATGCTTTTGAGCGGCGATAAAC
TGGAATCAACTCCTTGTGTCATAAGGGATGGAAAGTTGTTTGTTGTTTCC
AAAAAAGATGAAGACATCACTGCTCCTGTTATCACTGCTTTTCGTGGTCA
CAACAAGAAGCGCTTATGGGAGCTGGCACAAATACAACCACGGTGTTAAA
AACTTGATCAGTGGAATGGCATCCATGCCATCGAGTACGACAAAATTGTT
CGGTGTAGGGCTCAATGGACATTTATGGGAAAGGATTTGGTCAAGCAATT
CTTGGCATTGGGTAGATCATTGGGTGCCACCCGGCATGCTTTTGAGCGGC
GATAAACTGGAATCAACTCCTTGTGTCATAAGGGATGGAAAGTTGTTTGT
TGTTTCCAAAAAAGGTCGATTGTGGGAGAGACATTGGGGTAATGGACAAT
GGAATTGGGTTTTTCATGGCAGACCATTGAATTTCAACAGACAACGCGTT
AATCTGGATCCGACCAAATGTGTAGCAAGTAGAGGTCGATTGTGGGAGAG
ACATTGGGGTAATGGACAATGGAATTGGGTTTTTCATGGCAGACCATTGA
ATTTCAACAGACAACGCGTTAATCTGGATCCGACCAAATGTGTAGCAAGT
AGAGGTAACAACATGGACCGAGTGTTTGCACGTGGTACCGATGGAGAGAT
ATACCAGTTAAGATGGGTCCCTGGACTTTTTGGTGGCTGGCGTTGGAGAG
CTCATTTCAGGCCTAATGGTGCTGGAATCAGGGTAACAACATGGACCGAG
TGTTTGCACGTGGTACCGATGGAGAGATATACCAGTTAAGATGGGTCCCT
GGACTTTTTGGTGGCTGGCGTTGGAGAGCTCATTTCAGGCCTAATGGTGC
TGGAATCAGGATCGTGAGTGGAGGATTCGATGTCGGCATGACCGGTACAC
ATCTCTACGCCATCGCCAACAATGGTCAACTCTATCGTTTCCGTTTGGGC
CAAAACAACGCACAATTTTTGTGGGAAAATTCATTTGGTAGACCATCCTT
CACCAATCTTCGAAGTCTTTCCGTTAGCACCAGAAATGGCGTGACCAGAG
TCTTAGTGGTGTCTGTCAGGAATCAAGTCCATACTTGGAGTGGTAACCCA
TTTTCCTTTTCTGTAGGCTCTCGCCCGAACGGTGTCCACTCATTTGGGCC
AGCCATTATCCTCTCCAAGGAGTTCCAGCATACTTGTAGAGGAAACGCCG
AAACGATGGTCATGGTTAGGACACCGCACACAATATACTCCATGACCCTT
CCAGGCTTCGCCTTTACACAAGTCGGTTCAAATCACCGCCCTTTTATAGA
TGAGGTGCCAGCCGTTCTGCAAAACCCGAGATGCCCAAAAGTCTTCGTTG
TCACCAACCATGGTGAACTTGTAGAGTTTTTTGTTTAAATCGTGAGTGGA
GGATTCGATGTCGGCATGACCGGTACACATCTCTACGCCATCGCCAACAA
TGGTCAACTCTATCGTTTCCGTTTGGGCCAAAACAACGCACAATTTTTGT
GGGAAAATTCATTTGGTAGACCATCCTTCACCAATCTTCGAAGTCTTTCC
GTTAGCACCAGAAATGGCGTGACCAGAGTCTTAGTGGTGTCTGTCAGGAA
TCAAGTCCATACTTGGAGTGGTAACCCATTTTCCTTTTCTGTAGGCTCTC
GCCCGAACGGTGTCCACTCATTTGGGCCAGCCATTATCCTCTCCAAGGAG
TTCCAGCATACTTGTAGAGGAAACGCCGAAACGATGGTCATGGTTAGGAC
ACCGCACACAATATACTCCATGACCCTTCCAGGCTTCGCCTTTACACAAG
TCGGTTCAAATCACCGCCCTTTTATAGATGAGGTGCCAGCCGTTCTGCAA
AACCCGAGATGCCCAAAAGTCTTCGTTGTCACCAACCATGGTGAACTTGT
AGAGTTTTTTGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:156422..159713 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 556-1083:529 |
| Aaloc | 430-555:1029 |
| Aaloc | 310-426:2678 |
| Aaloc | 1-306:3293 |
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