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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:122288..124854+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041847 ID=XLOC_041847|Name=XLOC_041847|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2567bp|location=Sequence derived from alignment at sc0000069_pilon:122288..124854+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCAGCATGGAGATtcatgattttcttttcattgatgGTGGCCGA
TGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAATGGAATCCCTGATG
TTGTGGTGAAAGATTCACAACAGATGAATTGTACAAAGGATAACCCAACA
GCAATACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTTACAGCCTT
ATCAGAAGGTAAACTTAAAGTAAAGTTAGATAGCggtaaaaatttctgaa
attatCTGGCTTTTCATGCCAAGATCTACTGGTTATTAAGCTTGAATGAA
TCAAGTCACGTTTACTTTGCCTGGCTACTCAAGCCATTATCAAATGGTTG
CATTATCGCAAACCTCATTCACTTGGCATTTTATTTCTTATAGAGGGATG
CAGTAGCTTTATAACGGCTAGAGGACGACAATGTATTAATGTCACAGGAA
TAGAAATGATCAAAGCCGTCAAAAACGTCGTTCAAAACACTGCTACTCGA
AAATGGAAATGGGATACTCTGATTGACGATAATTCAATCTATGGAGACGT
ActaacaaaggatggcgaagaGATCGTAAGTATATCTGAATATATGTTCA
ACAACATAAGCACCGTCTGAATAAACGCCCTCTGTAGGAGAGGCGTTTAT
TTTTTGAGATAAGGTAGCTTCTTTCAAATAAGTAGCTGTAAAGAATCGTC
ATATAAAGGAAAACTTTGttggaaatatttaataaacgccccttgaAATG
CCCAAAATGGTCATTGTtatcatttgagaacgataagaATACAATCGGAC
TAGGGCGCCAactaaattctaaaaattaaagGATCCGTcctattatatat
aaaataaacGAGCTAACAAATTTTTCTCTAGTGTTTCAATACAAATGTTA
CATACTGGAGTGGACAACTGCTACAGTTGTGGTACAGGACGAGTCAAACA
AATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGAACATGTAAAGG
CTGTTCTTATCTattttttgagcctcaaattgttcatatcctgttcttat
ttttgggcTTTGTACCCTACTTTTACTACATGACCATAATacaattaata
attaataattattatttcaaatttcaaattgacaTTCAGGTTCTCCGTCG
TTCTtgaactgttcttattttcggcattttttgAACATcgttgtttcttt
aaaaaatgagagTATCCAATAAGGCAATAATTTCATATTTATCTCATCAT
ATAGATCCAGCCAATTTAAATGAACAAGATTTCACAATCCAAGTCAAAAG
AATCCCTACTGTTTCTACACAAGATGAGATGACAAAACTACaggaaactc
aaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATCGACTACATCG
GCAAAACCTAAAACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGA
TATACCAGCAAAACTATCGAGTTTGAGCATCAATGAGACAACAGAAACAC
cagaaactcaaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATTG
ACTACATCGGCAAAACCTAAAACAACGAGCTTAAGTCTTTTAAccaattt
tgatcaaaacataCCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAA
CAGAATCACCACCAACTAAAAAGGCGGTAAAGAAGAAAGCTTCATTCAAG
TGGAACGAATGGAACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCC
GTTAGATGTCGTCTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAAT
ATTGGTGAGAAAAATAATCTCCAAATTTAAGTAGTTTTCTTGTTTGCTGA
AGCTATGCCCGCCATTTCCCGTATTTAATCGCCAAGGTTGTGTCTGCCAT
TATTAATGAAAATGTTCGGATTGGAAGAGCAATTCTTAATGAAGTTCAAA
TGTCtgtttccataatggcagaacTGAACCCCAAACTTGAAACAACTTCT
TATAGACCGAATCCGCAAAGTTCTGTTAGGAACAGTCTTCAACCAAAACT
CAAGCAGGTTGTCCGTTCCACCCACAACCAAAAACAAGCAACAAAACTAT
GCGCAGgtcaataaataaatttacagCCTTGAGATGTAACTATAAAAATA
ACGTAACGCGGAATCGGTCTATACAATAGGCTTATTTCAAAACTCTAAAA
CAGCAAAATTCTCGCATCAAACTTTACACTTGAGATTTTTAGTGCACGGC
AATAATGTTCTGCGTCGAATGTGTATAGATAGACCTTATACATTGATTAC
TCTCAAACTTACAgatctttaaaaataaatggACGTTGAACtaactaaaa
aataaattatgaactaatttttctcctttccttttttcttctcattttac
tgattttgaaaaatttcttgaaattctacatccatcttttttttctcaat
tcgaAAGATTATTcttgcaaatttcaattttttttcatttgacgtATCAG
GGATAGAGCTGGGAACCACTTGCAACTGAGTCGTAAAACCTATCATTACA
CCAGACAGATGATGTAG Coding sequence (CDS) from alignment at sc0000069_pilon:122288..124854+ >XLOC_041847 ID=XLOC_041847|Name=XLOC_041847|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000069_pilon:122288..124854+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCAGCATGGAGATtcatgattttcttttcattgatgGTGGCCGA
TGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAATGGAATCCCTGATG
TTGTGGTGAAAGATTCACAACAGATGAATTGTACAAAGGATAACCCAACA
GCAATACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTTACAGCCTT
ATCAGAAGATGAAATCAGCATGGAGATtcatgattttcttttcattgatg
GTGGCCGATGGAAAAGCTGAATTTACCATCAGGCGTGGTGAGAATGGAAT
CCCTGATGTTGTGGTGAAAGATTCACAACAGATGAATTGTACAAAGGATA
ACCCAACAGCAATACCGATATCCAGTGAAGACTTTAAATGTGTGAATCTT
ACAGCCTTATCAGAAGAGGGATGCAGTAGCTTTATAACGGCTAGAGGACG
ACAATGTATTAATGTCACAGGAATAGAAATGATCAAAGCCGTCAAAAACG
TCGTTCAAAACACTGCTACTCGAAAATGGAAATGGGATACTCTGATTGAC
GATAATTCAATCTATGGAGACGTActaacaaaggatggcgaagaGATCAG
GGATGCAGTAGCTTTATAACGGCTAGAGGACGACAATGTATTAATGTCAC
AGGAATAGAAATGATCAAAGCCGTCAAAAACGTCGTTCAAAACACTGCTA
CTCGAAAATGGAAATGGGATACTCTGATTGACGATAATTCAATCTATGGA
GACGTActaacaaaggatggcgaagaGATCTGTTTCAATACAAATGTTAC
ATACTGGAGTGGACAACTGCTACAGTTGTGGTACAGGACGAGTCAAACAA
ATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGAACATTGTTTCAA
TACAAATGTTACATACTGGAGTGGACAACTGCTACAGTTGTGGTACAGGA
CGAGTCAAACAAATGAGCAATGTGCAATTGTCAAGATACCAGGCGAACGA
ACATATCCAGCCAATTTAAATGAACAAGATTTCACAATCCAAGTCAAAAG
AATCCCTACTGTTTCTACACAAGATGAGATGACAAAACTACaggaaactc
aaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATCGACTACATCG
GCAAAACCTAAAACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGA
TATACCAGCAAAACTATCGAGTTTGAGCATCAATGAGACAACAGAAACAC
cagaaactcaaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATTG
ACTACATCGGCAAAACCTAAAACAACGAGCTTAAGTCTTTTAAccaattt
tgatcaaaacataCCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAA
CAGAATCACCACCAACTAAAAAGGCGGTAAAGAAGAAAGCTTCATTCAAG
TGGAACGAATGGAACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCC
GTTAGATGTCGTCTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAAT
ATTGATCCAGCCAATTTAAATGAACAAGATTTCACAATCCAAGTCAAAAG
AATCCCTACTGTTTCTACACAAGATGAGATGACAAAACTACaggaaactc
aaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATCGACTACATCG
GCAAAACCTAAAACAACGAGCTTAAGCCTTTTAACCAATCTTGATCAAGA
TATACCAGCAAAACTATCGAGTTTGAGCATCAATGAGACAACAGAAACAC
cagaaactcaaaaagtcaccGAAGCTGCTTCAACCACACCTCAACCATTG
ACTACATCGGCAAAACCTAAAACAACGAGCTTAAGTCTTTTAAccaattt
tgatcaaaacataCCAGCAAAACTATCGAGTTTGAGCATCAAGGAGACAA
CAGAATCACCACCAACTAAAAAGGCGGTAAAGAAGAAAGCTTCATTCAAG
TGGAACGAATGGAACGTCACCTTAGTCATCTTCATGGCAATCGTGTGGCC
GTTAGATGTCGTCTTGATCGGTATTTGTCTTCGACGTTGCATAATGAAAT
ATTGGGATAGAGCTGGGAACCACTTGCAACTGAGTCGTAAAACCTATCAT
TACACCAGACAGATGATGTAGGGATAGAGCTGGGAACCACTTGCAACTGA
GTCGTAAAACCTATCATTACACCAGACAGATGATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:122288..124854 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1057-1122:2502 |
| Aaloc | 562-1053:1311 |
| Aaloc | 505-558:1257 |
| Aaloc | 391-501:882 |
| Aaloc | 211-390:396 |
| Aaloc | 1-207:1 |
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