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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:134065..138155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041845 ID=XLOC_041845|Name=XLOC_041845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4091bp|location=Sequence derived from alignment at sc0000069_pilon:134065..138155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTTGCAAATGAAGAACACAAGAGCTTTGTGCGTCTGTTTTTTCGT
TTCGTTCAACATATTGGGAAGCATAAACGGTAACTTTATCATTGAGAGAA
AAATTGGGGACTCGGATGAGATTATATTACTGGACAAAAACAAGGATCCG
TTAGATATTTTGGCAGGTGGCACTTTTATGGATCACCGCACGTGTAGGGC
TGATACTAACAAGGGCAATATTCGAAGGAACATTGGTTTATCATCACAAG
ACCCTGGCAGAAAGATTAGTTGCTATACTGAAGGTGAATTACAATCAGGT
AAGACTTAAAAATATAGTTtgagaaaatgaaatgaaagtagAGGTTAGTA
GAACTCCTTTAATGTATCAAATTAGTTATTAAAGGTCACGAAAAAACTCT
AGCCTGAGTAAAGTGTATTCTAGCGGTATGGACTGTTGTAGCCTGGTCAC
TATAAGGTAAACAATGTAAGTGATATGCATTTCCTTGAATCGTATAAACT
ATCGTTTTGTACGTGACCCCTTTTAAAATCGATCAAGTGACTTAATGGTT
ATAGGAGTGACTTGATTTCTTAATAAGATTCCCATGATGGTTGTGGTATA
CCGAGAATCCTTAGCTTTTTAAGTCAACTGAAGCATAAAACACCAACATA
CAGTTTATGccctaggcttctgctcatacTCCGACGAAAAAGTTCCTTat
agcatgaacatataaacgactggacatccatctcctttgtctttttgtag
aaaaggctgctagcttcgttgccgcctcgttaaaatcataaaatgaaaca
atagattttgatgatataccacttgggagtaccttgctaacaacgtcaaa
actttgacaaaagtctctgttgttctactcttctcaagtcttttatctat
atcataacaaagataacagaggcaaaatcatcgtcagcttgtcaaaactc
cgactaAattttctaaattttgacttaaaagtgtctaataattttaaaaa
gtgtcgcattctaatttcgatattcttatgacacaggctctaaacttggc
aagctattttttcaagtcataaaaaaaattattgaagtgacaaaagggat
tcaaaagtatacacgcagttgaaattctgcattttagagttgaaaatgtt
gatagaatatattacaaacttgtgaaaaaatttgaaaataatttttttgt
acattaggagtaatgttcaagctctatcaatccttttacctaaataattc
aaagaaataaaattatgacggaatattgtcggatttttcataccaatttt
gaaatacaggcggcaacgaagctcgcttcaaagagacaataaaagataga
tgtccagtcgtttatatgttcatgcttataggaagtatatctatagcgGT
CTGCGAATCAAGCTACTTTAACCCATATTCAATAAATCTTCAGAATGTGG
AAGCACTAATGGGAACGAATTCAGAACCATTCCCAAACAAACTACTCAAA
TCCCTACGAGATGTTCAAGCGCTGGAtgggaaaatataaaaatatgggGT
TTCAAAGAGCGTGATAGACTCGGTTGGCAAGAATTAAGTAATGGAGAGAA
AAGAAACGTTAGATTGTCCAGCAGAGCGTTAGTAAGTATCATGAATGAGT
TTGATTACTTTGATTTTACGCTTAAACTTTCTGAAATTATCACCAGTCTG
GAATCATTCTATTTTCTCTAGGCAAGCATTCATTTCAGCGACTGTAGTAC
AAAGATAGAGCCTTCGGCTATGGTATGccaggtcgtgggttcaatacCAG
GCCAGGTCATATCAAAAATTTCGTACTTGgtacaaaatggtacttgatgc
ctctctgctttgTACTATACAAtcaaagagaaggatcaagagCGAGTGGA
GCATTTGACGAAGAAAAAGTAGCATTTTTTCCTACCTTCGGGGAAAATTC
GAGAATAATAAGGTTTATATAGccattcaaaaaagaaattatttggtAAA
AACGCCTTATAATACCTCTttacagaattttgaaaatcgaagaaaattgg
atGGACTTTTAGGAGTTATCACGTACACATGCCCAAATGGAAATGTTTAC
TGTGATGTTCTCAAGTTTGCTGGAGCGGCTAAATGTAAGTGTGAAAACTT
TTCTTCAATGTCATATATTGGGAAAATGCTTTTTAAAGCTCAGgtttaat
caaaatttattgttttcgaCTCAATAAAGttgtatttcaaaaatcaccat
gTATTTTAAAATACAACTTTATTGAATTCGCTCTACGAAGAGTATTGAGC
ACTCTTTTAATGGTTGTTTTCGACTCAACAAACAACAAGCTCaaaaaaaT
GGCATGACATATTGGGAATTAACACCACGGTCACCTACTAATTTGAAGTC
TATTAATTCTCTTAGTATAGCGTCTACCAACAAGCAAGGTGCTACAGTTG
AgtctctctataactcgaacccgcaAGGAAAAATTACTTGTCCAAGCTAA
GGAAACATTCGATTTATAGAGAGTCGAGTTAAAGAGATTAGTGtaattca
atttcttttaaaatgttctatAGATCCTCTACCATACGCAAATTCAATAG
ACGACCTGATAAAAAATCTCAAGCAAATCGATGATGGATATCCAATAGGA
GCAACACCACCCACACCAGGGAGAAACACAAGATCACCAGTAACAAAAGA
TGACGAATCTTCAAATAACAGTGGTCTCATTATTGGTGTCGTATTTGGTG
TCTTTGTTGTCATCTTTGCAATGGTTCTGGCATTCTTCTTGTATAGGAGG
TaaaaaaaTCTTACACAGTCAAATACAAACACTTGCAATGTCACAAAAGT
TGCCAAAAGGCGTACTGATTCCCCATTTCTCGAAGCTGAGAATAAACTGG
AGCCAAACCCTTACAATCCTTACTTTCAGCAAAAGgttgacccttagaga
gacattCGATTTAGAAGATGAAAAACCAGACCCTTTAAGCACGCACATGA
CCAGCACCAATTTGTGCCTAAGTATCCCCCTTCGGGggttattagcgagt
ttatgtatttgcatttttgaggacgcggtaaagtgactgaagcgatctga
aaaaacccgcagttctgaccagcaaaatcgaggacggtaaaagtgctgat
ttaccgtcgtcctcacttagtcaggatctagtcaagtTAGAACCTTatcg
tctccgtcgcagaaaaacacacatgcataaactcggtattaaaGTGGTGC
CTTTCATGCATGAATCAcagtattattttctttttcttcaagacGTAAAA
GAAGCCGCCGAGCCAAGAAACAAACGCTCTCACCCGTATACGCAAAATGT
GAAGTCGACATAAACTCCACACAcggagaagaagaagaaagcaaACTCAT
ACACCAGTACTCCGACTCCAATGCATACGCTTTACCGTCAAACCCACAAC
CTGAGTACCGTGAAATCGAACCTGAAATTCGCTATTCACCTAGAAATAAT
CATATTTCCATGGAGACTCCGAAACAAAACAACAGCCATTATGTGTCAGC
TACTTCTACACAAACCAATAGCAACCAAGAGGGACCTGAAGATGAGTACC
AGACCCCTAATATAGTGCCTTCACCACAGAATGGAATCACATCTGAGAGA
AGTATAACAAAAGACAATATTAACGATGAAGCACTAGATTATAGCGTTCC
TAATAAAACTGGAAAGTCAGAATCTAAAAACAATACTAAAAATGATACGC
CTTACAAAGAGCGTTCTGTAGGATATAGCGTTCCTGATAAAGCTGGAGAC
TCGGAACGGAAAGGCTATACTGAAAACGTGAAAGAACCTTCGCCAGAGTA
TAGTGTTCCAGGATCAGCGGTAGATCATGTAGACGGTGGAGCTACCGATG
ATGAAACAGCGCCTTTAAAGGGATATAGTGAGCCGGGACAAATAATAGAT
AATGgtaataatgataatgataatggtGATGACGATGACGAAGTTAATTA
TTACAGTACACCAGCAACCAATGAAACGGATGCATTGGTGAGACCGAATT
CAGCGTTGTACGCTAAAGTGAATAAAAATACGAAGAGATAG Coding sequence (CDS) from alignment at sc0000069_pilon:134065..138155+ >XLOC_041845 ID=XLOC_041845|Name=XLOC_041845|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000069_pilon:134065..138155+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTTGCAAATGAAGAACACAAGAGCTTTGTGCGTCTGTTTTTTCGT
TTCGTTCAACATATTGGGAAGCATAAACGGTAACTTTATCATTGAGAGAA
AAATTGGGGACTCGGATGAGATTATATTACTGGACAAAAACAAGGATCCG
TTAGATATTTTGGCAGGTGGCACTTTTATGGATCACCGCACGTGTAGGGC
TGATACTAACAAGGGCAATATTCGAAGGAACATTGGTTTATCATCACAAG
ACCCTGGCAGAAAGATTAGTTGCTATACTGAAGGTGAATTACAATCAGAT
GACTTTGCAAATGAAGAACACAAGAGCTTTGTGCGTCTGTTTTTTCGTTT
CGTTCAACATATTGGGAAGCATAAACGGTAACTTTATCATTGAGAGAAAA
ATTGGGGACTCGGATGAGATTATATTACTGGACAAAAACAAGGATCCGTT
AGATATTTTGGCAGGTGGCACTTTTATGGATCACCGCACGTGTAGGGCTG
ATACTAACAAGGGCAATATTCGAAGGAACATTGGTTTATCATCACAAGAC
CCTGGCAGAAAGATTAGTTGCTATACTGAAGGTGAATTACAATCAGAATG
TGGAAGCACTAATGGGAACGAATTCAGAACCATTCCCAAACAAACTACTC
AAATCCCTACGAGATGTTCAAGCGCTGGAtgggaaaatataaaaatatgg
gGTTTCAAAGAGCGTGATAGACTCGGTTGGCAAGAATTAAGTAATGGAGA
GAAAAGAAACGTTAGATTGTCCAGCAGAGCGTTAAATGTGGAAGCACTAA
TGGGAACGAATTCAGAACCATTCCCAAACAAACTACTCAAATCCCTACGA
GATGTTCAAGCGCTGGAtgggaaaatataaaaatatgggGTTTCAAAGAG
CGTGATAGACTCGGTTGGCAAGAATTAAGTAATGGAGAGAAAAGAAACGT
TAGATTGTCCAGCAGAGCGTTAaattttgaaaatcgaagaaaattggatG
GACTTTTAGGAGTTATCACGTACACATGCCCAAATGGAAATGTTTACTGT
GATGTTCTCAAGTTTGCTGGAGCGGCTAAATaattttgaaaatcgaagaa
aattggatGGACTTTTAGGAGTTATCACGTACACATGCCCAAATGGAAAT
GTTTACTGTGATGTTCTCAAGTTTGCTGGAGCGGCTAAATATCCTCTACC
ATACGCAAATTCAATAGACGACCTGATAAAAAATCTCAAGCAAATCGATG
ATGGATATCCAATAGGAGCAACACCACCCACACCAGGGAGAAACACAAGA
TCACCAGTAACAAAAGATGACGAATCTTCAAATAACAGTGGTCTCATTAT
TGGTGTCGTATTTGGTGTCTTTGTTGTCATCTTTGCAATGGTTCTGGCAT
TCTTCTTGTATAGGAGATCCTCTACCATACGCAAATTCAATAGACGACCT
GATAAAAAATCTCAAGCAAATCGATGATGGATATCCAATAGGAGCAACAC
CACCCACACCAGGGAGAAACACAAGATCACCAGTAACAAAAGATGACGAA
TCTTCAAATAACAGTGGTCTCATTATTGGTGTCGTATTTGGTGTCTTTGT
TGTCATCTTTGCAATGGTTCTGGCATTCTTCTTGTATAGGAGacGTAAAA
GAAGCCGCCGAGCCAAGAAACAAACGCTCTCACCCGTATACGCAAAATGT
GAAGTCGACATAAACTCCACACAcggagaagaagaagaaagcaaACTCAT
ACACCAGTACTCCGACTCCAATGCATACGCTTTACCGTCAAACCCACAAC
CTGAGTACCGTGAAATCGAACCTGAAATTCGCTATTCACCTAGAAATAAT
CATATTTCCATGGAGACTCCGAAACAAAACAACAGCCATTATGTGTCAGC
TACTTCTACACAAACCAATAGCAACCAAGAGGGACCTGAAGATGAGTACC
AGACCCCTAATATAGTGCCTTCACCACAGAATGGAATCACATCTGAGAGA
AGTATAACAAAAGACAATATTAACGATGAAGCACTAGATTATAGCGTTCC
TAATAAAACTGGAAAGTCAGAATCTAAAAACAATACTAAAAATGATACGC
CTTACAAAGAGCGTTCTGTAGGATATAGCGTTCCTGATAAAGCTGGAGAC
TCGGAACGGAAAGGCTATACTGAAAACGTGAAAGAACCTTCGCCAGAGTA
TAGTGTTCCAGGATCAGCGGTAGATCATGTAGACGGTGGAGCTACCGATG
ATGAAACAGCGCCTTTAAAGGGATATAGTGAGCCGGGACAAATAATAGAT
AATGgtaataatgataatgataatggtGATGACGATGACGAAGTTAATTA
TTACAGTACACCAGCAACCAATGAAACGGATGCATTGGTGAGACCGAATT
CAGCGTTGTACGCTAAAGTGAATAAAAATACGAAGAGATAGacGTAAAAG
AAGCCGCCGAGCCAAGAAACAAACGCTCTCACCCGTATACGCAAAATGTG
AAGTCGACATAAACTCCACACAcggagaagaagaagaaagcaaACTCATA
CACCAGTACTCCGACTCCAATGCATACGCTTTACCGTCAAACCCACAACC
TGAGTACCGTGAAATCGAACCTGAAATTCGCTATTCACCTAGAAATAATC
ATATTTCCATGGAGACTCCGAAACAAAACAACAGCCATTATGTGTCAGCT
ACTTCTACACAAACCAATAGCAACCAAGAGGGACCTGAAGATGAGTACCA
GACCCCTAATATAGTGCCTTCACCACAGAATGGAATCACATCTGAGAGAA
GTATAACAAAAGACAATATTAACGATGAAGCACTAGATTATAGCGTTCCT
AATAAAACTGGAAAGTCAGAATCTAAAAACAATACTAAAAATGATACGCC
TTACAAAGAGCGTTCTGTAGGATATAGCGTTCCTGATAAAGCTGGAGACT
CGGAACGGAAAGGCTATACTGAAAACGTGAAAGAACCTTCGCCAGAGTAT
AGTGTTCCAGGATCAGCGGTAGATCATGTAGACGGTGGAGCTACCGATGA
TGAAACAGCGCCTTTAAAGGGATATAGTGAGCCGGGACAAATAATAGATA
ATGgtaataatgataatgataatggtGATGACGATGACGAAGTTAATTAT
TACAGTACACCAGCAACCAATGAAACGGATGCATTGGTGAGACCGAATTC
AGCGTTGTACGCTAAAGTGAATAAAAATACGAAGAGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:134065..138155 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 907-1617:3381 |
| Aaloc | 823-906:3294 |
| Aaloc | 598-819:2576 |
| Aaloc | 487-594:2026 |
| Aaloc | 301-486:1446 |
| Aaloc | 1-297:1 |
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