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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:246927..251345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041843 ID=XLOC_041843|Name=XLOC_041843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4419bp|location=Sequence derived from alignment at sc0000376_pilon:246927..251345- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTATCATTGTTTTGAGTTTGTTATTACTGGTAGTAAAGCGAAG
AACAGCTTTGAAAATTTTTCGGGATAGATATGGAGATCAGGACCGGATAC
CTTTTCCAAGGTGTAATAATCTGAAAGGCGATGAAACGATAGGCATAGAG
TATGGCACTGATTGTCTCTGTAAAGAAGAAAACAATACATTCTTTGACGA
AGGTGTATTTGATTGTGCAAGTATGGAACAAATAAAAAGGCATGAAGGTA
AGTGAGGAAAGTGTTTAATTTTTTTAAAGGAAAGAAACAGGAAGTTATTG
ATTGTATTAACAATATCAATAATTTGGAAATTCGTTGGGTATAGATTTGA
GAAAAACTATCCACCCTACTTCCATAATTTCAAAGCTGTCTGTTCTTATA
ACATTGTCTTTACGAAACAGTCGAAGGGAAATCAAATCGTATAAGAATGA
GCATGAAAATTATATTAAATTTGAGAAACATATTTTCTGACTCCCATTAT
TTTCTTTTTATAAGGTTGTAAAAACTCTATTATAACTAAACAAACAAATG
TGAAAGAAGAATTCAATCCTCGTTGCACTCTGGAGAATGGTAAAGAATCG
ATCAAGATAATACTGAGAGATCATTCTGATTCCGGATCAGTGTGGACTGA
CGAATTTTCAAGAGATCTGGTCCATGCATTGATTACCATAAATGATAATG
GTATCATTGTGAGTTTTATTATTAGATTTGGAAATAAATTTTCACCTTGA
AGATTATTAACACTGTTAAAGACATCTTAAGAATAATAACCGAGAATTTT
TACTTTGAATGATGCAAGCCTTCATATTGAGCAAAAAGTCAAACTTATAA
TACTTAACCTTCTAAAATTCCTTCGGTCCAATTGTCTTGTATGTATAATT
TAATTGCAGAGCTTCGATCATAAACCAAGCTATTTTGTTGGGGTTCTCGT
AAAGATTGAATTCCAATGCAAAACGCAAACACCGACATGCATAATATTGA
AATCAGAGGGACTACAAACATGTAAGTTAAACATTTAGAAAATTTAAGAC
TTTAATAATTCAAAAGGCAATTAACATATTTATACAGTAGACGCTCTCTA
ATTCGGGAATTCAATTTTCATCGAAAAGGAGAACGTCGTTTATGAGAGTT
TCTTGTTGAAGGTAGCTTTAATATTATCGAACATTGGAGCGTATCGAACA
GTAGAGTTACAGTTGACGCTCTCTAATTCGATCTTCAAGGGGGATTGAAT
TTTCATCAAATAAGGGAGTTTCTTGTTGACGGGGACTTTAAATTTCATCG
AATAAGGGAGCCTATCGAATAGTAGAACGTCGAATTAGAGAGCGTCAACT
GTAGTTGATTTAAAGAGTCTCGACATATTGAGAGATTTAATGAAAAGCAA
GAATTATAGTGGAATCAGATGATACATTAATAAAGTAAAACGAGTCTTTC
TAAAATAAATTTATCTTTGTTTTCTTTAGATCCCTTTATTTATGAAGGAC
CAGACGCACCACCTCTACCAACGACAACCACGACAACAACAACAACTAGT
ACAACCGCAACACCTACAACAACATTACAAACTACGACTACGACCCTCCC
GACAACAACAACAACAAAAATAACACAAACGACAACAGAAGGTACTACTT
TAATCACTACTCCACAAGAGCCTCCCACGACCACTGCTCAGTCCACCAAT
GTGGCAATTCAGTCCACTACGCCTCCGACACCTACCACTCAACCAAATCC
CTCGACAACAGTCTTACAACAACTTTCCACTACAAATACAGAACCACCAG
AAAATTCTATACCTTTTTCCAGTACCAAAGTCCCAAGTGAAGGTTTGTAG
ATTACCAAAACGCCAATCTTGATATATCTATTTATTAGACAATTTTCCTT
TTTCCTAGTTCCTATAGCTTTCATTTGACGAAATCAAATTTAATTGGATG
TTAAAAACTTCCTACATAAAATTGGATTTCTTGTTTGTCAAAAATATTGA
ACAAAGATTGACAGTCAACTTTATTAAGATCTTTTAGCCCTTCCAAAGGA
AGGCGGGACACAAGGTCATCGGCCTCTTCCTTTTTTTGCAAAGAAAAACT
ATTGAAAACCTTTCCTATTATTTCTCTATTATAGTATGTAGTATTTAGCG
CCTCACGTTATTTTTATCTAGACCGCAAATTCTCACTTGAATCTATACTA
TTTTCGTTTCAGAAACGACAACCAATTCGCGATCAGCCATTGATGACAAA
TCAACCAGCAATGACGGTGGAGATGATGATGGATCAGTTATGGTAATCAT
TGTGGTGGTCGTTGCGGTCGGTGTCATATTCCTGATTTTACTCGTCGTTT
TCATCGTTTGTCGTAAGAGGTAAGGACAGTTTATTATGATTCAAAGCATT
TTCACCCCGTACCTTATCGGGAGAAAAATTGTCAGAGTTTTATTTAGTCG
GGTTTTTTTCTTCGGGGAAAAATTTTATCACCTAGAGGCATTTTCGTCAC
TTTCCCCCGACCAAAATTTCAAATTCGTCACTTTTCCCCAACTAAATTGT
CCAAATGAAATGGTTTCTTTCACTAGCTCGAAAAAAAGATCTTGTAATTC
GACGTTTAAAGCACTAATTTCGGTTAACAAAGGTGTAAAAAATTTAGATT
ATAATTTTGGTCGGGGATAAAAAATCGGGTAAAAGTTTTTGTCGGGTGAC
AAAATATCGGGGAAAAAATTCGTCGGGGGAAAACTCAAAATTTTCGTCAC
TTTCCCCCGACATTTTTTCCCCAATATAAAGTATCGTACAGAAACCAAAT
AAATCTATAGGTTACTATAATTGTCATTCTTCCCGTAATTGGCCGATAGA
ATATAAAGTGCATTGCGTGCTGTGAAGCGGTGTTATATTTTGTTTATACA
GTGGCCAAAGCGAGGTTTCACGTCTGAGACATAAAAGTGTTTCTTCAAGC
CACACAAGTGGAATTGGAAATTTTTGGGGAGAAATTCAATTTCGACTTCA
AAACCACAGGACCTTTGACTTTTAACTTTGTGGCAACAAGATATTATTTT
GAAAGGTTCTCAATCAGCAATTTTATGAGGAAATAATTCATCGTATAGTG
AAATGGGAAACAAATTGTCTGGAAAAAGAAGTATTTTCGATTTGTAGAAG
TGACGCCTATTTTAAAGGACCATATATTTGTTATCAGCAAATAATAGCTT
GCGTGGTATAAGCAACAAACTGCATTCCAAATAATAAACATAATCATACT
GTTGTTGGGTCAAATATTGAATTAAAAAAGGTTTGTTTGGCATAAAACAT
AAATACTGCATACCAGAGCAAATAATATCATGCAAGTGTAGGATGGCACA
AAAGCCCTGAGTAAGGCTCTTAATTATCTTAGCCTCATCAAACCTGTCAT
TAAAACGTTCTAATGACTCTTTTGTTTGTGTTTTTCTTTTTCAGAAGGAA
TAACGGAAATGCTAAAGCATCATCGGCTGAGGTAAGACAATTTAAAAGCA
TGTGTGCGTGGTTGATTTTTCTAATTTACCGGAAAGAAATTAAATTAAAA
CCTCAGAACCTTGACATTTTGTGCAAGAGATAATTTTAAGAAATTTCCTT
AGTATGAGCTTTGGCAAATACAATCCTTTCTTTCGGTTATGCAACATCAA
AAGACAAAGATTGATCAATATGAAAGAAAAAGTTTTTAATAACAAAGATG
GACCACCTTACTTAGCGTCTATATTACAACTCTTTACGCAAGCAGGAGGG
GGTCAACAAAATAGACTTGTTTGGTCTTCCGAAGTATTTTCATTTAAATG
TTGAAATTTCGTAGATATAAGAAATCTTTCTCTTATAACAACTTGTTTAA
GTTTCATACTAATGCGCGTTAATATTAAATCATTCACTGAGGATATTATC
ATTATTCAATTCCAGGACCTTGGTCGAGATTATGCGAGTTATTCAAGTGA
AATTGCCATCAATAAGACGGATCGGAACAAGAATTCGTTATCAATTGATT
TGACAGATTCAGCAGAGTACCAAGACATCGGTAAAACAACACCAAATTAT
ATTCCCTTAGAATCTGCTTTCACTAATGAGGCATACACGGATCTAGAGGG
AAACAATCCGGAGTATAGAGAATTGGAACCTGAACCGGTAGTATATAATG
TATTGGAAGAACCAGTATACCAGGAGACAAGCAAACCGCTACCAAAAGAG
AAACCAGTTTATCACGCTAACCCACAACCACCCATGGCTCCACCAGAGCG
CCGCCGACAGCCCCCGAAACCACCAACACCTTACCAGCCAAGCAAGCCAG
TCGTTTCTCCACCATCCCAACTTGAACAAGAAGATTATTATAGTGCGGCT
GCCTCCCCACCACAAGTTCCGCATGACATAGCGGCGCTTTACGCTCCGGT
TATTAAGCCGAAAAAATGA Coding sequence (CDS) from alignment at sc0000376_pilon:246927..251345- >XLOC_041843 ID=XLOC_041843|Name=XLOC_041843|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3278bp|location=Sequence derived from alignment at sc0000376_pilon:246927..251345- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTTATCATTGTTTTGAGTTTGTTATTACTGGTAGTAAAGCGAAG
AACAGCTTTGAAAATTTTTCGGGATAGATATGGAGATCAGGACCGGATAC
CTTTTCCAAGGTGTAATAATCTGAAAGGCGATGAAACGATAGGCATAGAG
TATGGCACTGATTGTCTCTGTAAAGAAGAAAACAATACATTCTTTGACGA
AGGTGTATTTGATTGTGCAAGTATGGAACAAATAAAAAGGCATGAAGATG
AAATTTATCATTGTTTTGAGTTTGTTATTACTGGTAGTAAAGCGAAGAAC
AGCTTTGAAAATTTTTCGGGATAGATATGGAGATCAGGACCGGATACCTT
TTCCAAGGTGTAATAATCTGAAAGGCGATGAAACGATAGGCATAGAGTAT
GGCACTGATTGTCTCTGTAAAGAAGAAAACAATACATTCTTTGACGAAGG
TGTATTTGATTGTGCAAGTATGGAACAAATAAAAAGGCATGAAGGTTGTA
AAAACTCTATTATAACTAAACAAACAAATGTGAAAGAAGAATTCAATCCT
CGTTGCACTCTGGAGAATGGTAAAGAATCGATCAAGATAATACTGAGAGA
TCATTCTGATTCCGGATCAGTGTGGACTGACGAATTTTCAAGAGATCTGG
TCCATGCATTGATTACCATAAATGATAATGGTATCATTGTTGTAAAAACT
CTATTATAACTAAACAAACAAATGTGAAAGAAGAATTCAATCCTCGTTGC
ACTCTGGAGAATGGTAAAGAATCGATCAAGATAATACTGAGAGATCATTC
TGATTCCGGATCAGTGTGGACTGACGAATTTTCAAGAGATCTGGTCCATG
CATTGATTACCATAAATGATAATGGTATCATTAGCTTCGATCATAAACCA
AGCTATTTTGTTGGGGTTCTCGTAAAGATTGAATTCCAATGCAAAACGCA
AACACCGACATGCATAATATTGAAATCAGAGGGACTACAAACATAGCTTC
GATCATAAACCAAGCTATTTTGTTGGGGTTCTCGTAAAGATTGAATTCCA
ATGCAAAACGCAAACACCGACATGCATAATATTGAAATCAGAGGGACTAC
AAACATATAAATTTATCTTTGTTTTCTTTAGATCCCTTTATTTATGAAGG
ACCAGACGCACCACCTCTACCAACGACAACCACGACAACAACAACAACTA
GTACAACCGCAACACCTACAACAACATTACAAACTACGACTACGACCCTC
CCGACAACAACAACAACAAAAATAACACAAACGACAACAGAAGGTACTAC
TTTAATCACTACTCCACAAGAGCCTCCCACGACCACTGCTCAGTCCACCA
ATGTGGCAATTCAGTCCACTACGCCTCCGACACCTACCACTCAACCAAAT
CCCTCGACAACAGTCTTACAACAACTTTCCACTACAAATACAGAACCACC
AGAAAATTCTATACCTTTTTCCAGTACCAAAGTCCCAAGTGAAGATAAAT
TTATCTTTGTTTTCTTTAGATCCCTTTATTTATGAAGGACCAGACGCACC
ACCTCTACCAACGACAACCACGACAACAACAACAACTAGTACAACCGCAA
CACCTACAACAACATTACAAACTACGACTACGACCCTCCCGACAACAACA
ACAACAAAAATAACACAAACGACAACAGAAGGTACTACTTTAATCACTAC
TCCACAAGAGCCTCCCACGACCACTGCTCAGTCCACCAATGTGGCAATTC
AGTCCACTACGCCTCCGACACCTACCACTCAACCAAATCCCTCGACAACA
GTCTTACAACAACTTTCCACTACAAATACAGAACCACCAGAAAATTCTAT
ACCTTTTTCCAGTACCAAAGTCCCAAGTGAAGAAACGACAACCAATTCGC
GATCAGCCATTGATGACAAATCAACCAGCAATGACGGTGGAGATGATGAT
GGATCAGTTATGGTAATCATTGTGGTGGTCGTTGCGGTCGGTGTCATATT
CCTGATTTTACTCGTCGTTTTCATCGTTTGTCGTAAGAGAAACGACAACC
AATTCGCGATCAGCCATTGATGACAAATCAACCAGCAATGACGGTGGAGA
TGATGATGGATCAGTTATGGTAATCATTGTGGTGGTCGTTGCGGTCGGTG
TCATATTCCTGATTTTACTCGTCGTTTTCATCGTTTGTCGTAAGAGAAGG
AATAACGGAAATGCTAAAGCATCATCGGCTGAGAAGGAATAACGGAAATG
CTAAAGCATCATCGGCTGAGGACCTTGGTCGAGATTATGCGAGTTATTCA
AGTGAAATTGCCATCAATAAGACGGATCGGAACAAGAATTCGTTATCAAT
TGATTTGACAGATTCAGCAGAGTACCAAGACATCGGTAAAACAACACCAA
ATTATATTCCCTTAGAATCTGCTTTCACTAATGAGGCATACACGGATCTA
GAGGGAAACAATCCGGAGTATAGAGAATTGGAACCTGAACCGGTAGTATA
TAATGTATTGGAAGAACCAGTATACCAGGAGACAAGCAAACCGCTACCAA
AAGAGAAACCAGTTTATCACGCTAACCCACAACCACCCATGGCTCCACCA
GAGCGCCGCCGACAGCCCCCGAAACCACCAACACCTTACCAGCCAAGCAA
GCCAGTCGTTTCTCCACCATCCCAACTTGAACAAGAAGATTATTATAGTG
CGGCTGCCTCCCCACCACAAGTTCCGCATGACATAGCGGCGCTTTACGCT
CCGGTTATTAAGCCGAAAAAATGAGACCTTGGTCGAGATTATGCGAGTTA
TTCAAGTGAAATTGCCATCAATAAGACGGATCGGAACAAGAATTCGTTAT
CAATTGATTTGACAGATTCAGCAGAGTACCAAGACATCGGTAAAACAACA
CCAAATTATATTCCCTTAGAATCTGCTTTCACTAATGAGGCATACACGGA
TCTAGAGGGAAACAATCCGGAGTATAGAGAATTGGAACCTGAACCGGTAG
TATATAATGTATTGGAAGAACCAGTATACCAGGAGACAAGCAAACCGCTA
CCAAAAGAGAAACCAGTTTATCACGCTAACCCACAACCACCCATGGCTCC
ACCAGAGCGCCGCCGACAGCCCCCGAAACCACCAACACCTTACCAGCCAA
GCAAGCCAGTCGTTTCTCCACCATCCCAACTTGAACAAGAAGATTATTAT
AGTGCGGCTGCCTCCCCACCACAAGTTCCGCATGACATAGCGGCGCTTTA
CGCTCCGGTTATTAAGCCGAAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376_pilon | genome | sc0000376_pilon:246927..251345 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1147-1650:505 |
| Aaloc | 1111-1146:975 |
| Aaloc | 955-1107:2206 |
| Aaloc | 826-951:2705 |
| Aaloc | 613-813:2906 |
| Aaloc | 556-612:2964 |
| Aaloc | 442-552:3511 |
| Aaloc | 250-441:3904 |
| Aaloc | 1-246:4420 |
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