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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000287_pilon:415037..421672- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041841 ID=XLOC_041841|Name=XLOC_041841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6636bp|location=Sequence derived from alignment at sc0000287_pilon:415037..421672- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCCTTGTTTCATCTGTGTTATCAAAGTTAACAAAGGTAGTTTAATT
TTTTTTATTGTTTTGTAATCTGTTGTAATAGCTATTTTATTTTTCATCTG
ATTAAAACATCTTTTAATATTCCTGCTTTATTTTTTAAGAAAAAGATAAC
AACCAAGGAAAGATTGGAAAAAATTGAAGAGGTTTGTTAATTTAGTGCTC
ATTTATTTTTAAATATGTTTCAAATTCCTTGTATAGATAAATTCGTTTCA
GCTTGGTTATTTTTCAATTAGTTCATGGGGTAAACTGGTTTATTTGGTTT
CTATCCATTTATTTGCATAAGCCTAAAAAAGCTAACATCGCAAATACAGT
AACAATCGTAACAATTGGTACAACAATCATGTAATTTCATTGTTTTTATT
CACTTTCCCCTTTTGTAGGATATCGAAAACATTCAAAATCTACTGAAAAG
GAATCGCGAAAAACAACGTTCAGCTGTATTGTTTTTACTGGTCACATCAA
TCTCAATATATCTGATATGTGCTGCAGTGTTCTATTTATTTTACATGCCC
AAAAAGTTGGTTGATCGGTTGCTTTTCTTGGTACCATTCCTACTCTTCCC
CTTTCTGTAAGATATTTTTTTATTTACACTTTATGCCAACTTGACTTAAA
GCAGGTCCAGAGACTAATTTGTCTTCAATGTGAAATTTTCTTGTTGTGAT
GATTTTGAATTGATGTTAAATTCTGTCTTATTATCAATGACCTATTTGTT
AAAAGGATATGTTGAATGTATAATTATTAAAGAGAAACTACTAGATATTT
CGGAATTTTTGAATTTTTTTTCAATAATCATCAAAATCATTATCATAAAA
TATCTATTACAAGAACTAAATATCTTGCTCATCTTGTTATTTTCTAGTGT
TATTGGTTTGAAGAAGCTATTACATTATGTATTTGTCACAAGAATTGCAA
AAAATAGTAAGAAATTTACCACTTTTCTATAGTTTATGCTTTTGAATTCA
ACTTGTACTGTATGTAGTTTTTCATGGACTGAAATTACCTCTGTTTTCTT
GGTTTTTGTTTAGGTCGACAACTGGAAGATTTAAAAAAGGAGAAGCAAAA
GATTGTAAGTAAGCATTTATAGTATAGCTGTCAGTCTTTAACTTTCTAAA
CTAAGAAGATTTGGTAGCTTCTTAATATGCATCAGATTTTGGACACAATT
TTTGTTTTCTGCACAATGTTTTTGGAGATCCTGCCAAAATAAGCTAGCTT
AACCCTTCGAGCATCTTGGGGTGGGGGCAAAGAGCCTCCCCCCAAAAACG
AATTTTTTTGATAACTTTTGAAATATTTATCCAATTGAGTTAAAATTTTG
TAAGTGTGCACTAAATGTGAATTGACATCTTTGATGAAAATTTTGGCATC
ATTGATGACGTCATCACCACCTGGGTTATAGGGCAATAATGTCATTTGTG
ACCTGCTCGGAATTGGATTGAAGTCGTTGTATTGAAGCAAAGAGACAAAA
CTAACGTCAGAAAAAACACTTTTTGAAGAAACTTGTTGAAAACATTGCAT
TGAAGCGAAAAGACTTGGCTGACGCTAAAAAAACGTTGTTTGAATGTCCG
ATATGGATAATAGTAGTAATAGCGTAAAGTTTTTGTTCGTCGTTGTCATT
AATTCTGAGAACGCTATTGTTATATTGATAATACAATTTCAGCACAATCG
GGCAAATGATTATGCTAAAAGTGAGCATTTTAGGTAAAAAACGGACCGGT
CTGTCAAATACCAACCGCTCGCATAACTAAATTTAAATTTTGCACGCTGT
CTTAAATGGTCAATATTTATCACTGGTGAAAATTTCTATAGTCAAAACTT
CCAGTAGAGTTGGAAGTTTGGACTTCAAAGAGTTGGCAGTATTATTCTGC
TTAATCTTGTTGTGACTGGTTTTATTCTGAGTGTAACTTGTAATTTTAGG
GCTATATAACTGATGAGTGAAATTGATTTTCAATTCAATTATTTTCCAGC
TAGAAAATGTGATGGAAACTGAGACGTACAAAGTTGCAAAAGAAATATTG
GAAAAGTTTGATCCCAACAGAAAACTTGTAGAGGTTTGGATGGACAGTAT
TTTCTTAGTAGAGCTTTTTGTTCATACTATAATATATGCTTCGATCCAAT
AATAAATAGAATCACTAAGTGTTCGAGGATATTTCCAGAGACATAAAATA
TGGGGAAATAAACTTCAAAACTTCAAATTGCTACATAGTGTTTCTGTTGG
TTACAATCTTTAAGTCAAGCCTACTCTGATGATTTCTTCAAGGTAGCTGC
AATGCAAGCATTGTCACCCAAAAATTCAGTTTAGATAGCGAAAAATCACC
GTTTGTATTGTTTGTTGTGGTAGATGAAATAAATCTTTAACATCTTATTA
TCTTTAGAAAGATAAAAATGAGAAGAAAACACCACAACCCCAGCAAGCTA
ATGGAACAGGTATGACATTACTTTGCTTTTTTCACTATCTAATTTTGTAG
TATGCAGTTATTTCTTGGACATGATGTTATCATCTTTTAATTAAATCAAC
AAAATCTGTTTTCTTTGCTTGAATCTTCACTTTCCCATTTTTCTTGAAGA
ATTACGCAAAAGGGCTGGGCAACAGCAGCAACCACATCCAAGACAAATGA
TGACACCACGTCCAATGATCGCATCAACACCACAAATGATGAATAATAAT
GGAACACCATTCCCACCAAGGATGCCTCAACAACAGTTCCAAGGTACTCC
ACACTTCAGGGGTAAGAAAATCTCTAAGATGTTTTTTTGCTAACAACGTA
ATCAGCAGATGTATCTATATATCATTAGATTTATTGATAAATCGGTTTCG
TGAATTTGTATTATATCTATATTAGTACAATTTGAAATTGTTTTCTGGCA
ATATACTCTAAACGGGTATACAGCTTTTAAGGTAAATAGCTACTACCAAC
CACCAATTTAGAAGGCTTGGAATGAAATAGAATCGGACTCATACAATTAT
AGAATTCCAATTTTAACTGGCTCTAAAAAGTCTGTTTTAAACTGTGTTGT
TTCTATTTCAGACGGTCTTTTATCTTTTTTTAGGGCCACACCCAGGCATG
CCTCGTCCAGCTACTCCAGCTCCAATTCTACCAAGAGATAGATCAATCGT
CGATAAAGTATGTATTATCATTCTTTGAAGGATTAATTTCAATAAAGGTA
TTGGCCTCATTAACAGACTTCGCAAACATGTCCCTAGGAAATCTCTGCTA
ACTATTTATAAATCGTTCATTAGACCTTACCTTGACTACGGTGATATCGT
ATATGACCGTCAAGGAAATGTCTCTTTTGTGCTGAAGCTCGAAACCATTC
AATACAATGCCTGTTTAGCCATAACAGGCTATTTTCGTGGAACGTCTCAG
GAAAAAATATATTCTGAACTTGGCCTTGAAAGCCTTGCTGACAACCGTTT
TGCAAGAAGAATGATATTTTTCTATGAAATTATAAACATTTTAACTCCGT
CTTATTTACGTAACTACCTGCCAGCAAGGGTAACAGCGCCCATTGGTCTA
AGAACAAGAAATCCTATTTATCCTCTTAATATACAAACAGAACGTTTCCG
AAACACTTCCTTCCCTTACTGCATATCTCAGTGGAATATCCTGGACGATG
ATATAAGAAACTACCTTCCATTAAAACCTTTAAGGAAATCAATTTATGAA
TTTTTGAGACCCAGCCAGTGTCATGTTTTTTATGTTTCTGATAATCATAA
TCAATCATCCTCAATAGGCTTCGTGTTGGATTCAGTCATCTCAATGAGCA
AGTTTAGGCATGGTTTTCGCGATACTCTAGACCCTTTCTGTGGTTGTCGG
ACAAACTCTGTTTAAAATACACTTTATGACATTTTATTCTACATTGCTCT
ATATATTCCCATGAAAGACAATCACTGTTCAACAAGCTTCATACCTTAGG
CATTAATTTTTTCCCACTTGACACCTCAATTTTGTCGGCTACTATTATAT
GGTGATGAAAGCCTAACTTTAATAATGAACCAAGCAATTCTCTGGTTGCT
TTTATGCATGAAACCGGTAGGTTCAGTGGGACACTATTTTAATCTTCTAA
ACAATCATAGCTCCTTTAAATCTATCCTTTTAATATTATTTGTTCTATTT
TTTCTTCTTCTTTTATTTAGTCTCGTACCTCTGGCGATATCACTTAGTGC
CTAGCGGGGGGGGGGGGGAAGACTATTTTCTCTTTTGTCAATAGTGTTTT
GTCTTATTTGTTCGTCTGTGTAACCCATATCATGAAGAAATAAAAAGATA
AAATTATATCATGGAATTTCATTTGTATAAAATCTTTTCGGCTTTCCTCG
GGGCATGCTGTATAACTTTCAGGTTGATCAGATTTTTAGTTTTAGGAGGC
AAAATAGTCAAAGATTCTCTTAATGGAATTTTATCGTTCGATCTATAGAT
TGATACTTTAGTGTACTACTTGAATGAACAACTTCTTTTGATGAGTAACC
TTTTCTATGTACATTCTCGTGAAGGTGGCAGAGTATTTTGTTGGTGATGG
ACCAAGTAATCGATATGCACTGATTTGTAAACAATGTGCTGGTCATAATG
GAATGGCTCTAGCTGAAGAATTCATGTTTATTGGTAAGTTGCTTTACCGG
GTGACGGCAAACCACCATTTTTTAAGTCCAGCCTAAGTTATTTTATTTTC
ATATCATAATAAAATGTACTGGTCTTTTTTTCAAATCTTTATACTGTAGG
ATTAAAAGAAAGTAACTGCTCGAATCCAGGAAAAGAGAGTCCAATTACAC
TTTCCTTAATTCTTATCATGGCATTAGTGTTATGATTCTCTCTTTAATCA
AAAGTTATAAGTCGAGCTCTCGAAAATTGCTTACCATTTCCCCTGAGGAA
ACTCATAAATTATTTTACCATACTTTTATTTTGTACAACATCATGGTACA
CTAGTTTTGAACTGGATAGAAACCGAGTAACCTAGGAGCACTACGTTTCA
TTTACCTTTCGATTACACCAATAAAGATGGTTCACAAATTCTCCATTTTC
TTTGAGACGTTCATTCACTAAAAAGCTAAATGCACAAATTTTCATTGTTC
TAGCATATAAATGCTGTTACTGTGGTATGCTCAACCCGGCACGCAAGCAG
CGTCTACAAGCACCGAAGCTAGAGAAACCTAAACAAACATTATCCAGAGA
GAACTCAACGTCTTCATTGAACCAAACTCAATCATCAGGAGCAGAAGAAG
ATGAGGATAGTAAGGAAGAAGGAGAAGATGAAACAAAACAACGGAGGAGT
GGTATAAATGAAGAAGAAAATGAGGAAAGTCCAACTCATTCTGATGATGA
TAAAAATGATGTTCAAGGTTTGTTATTGTTTGAGTTTTGATGTTCAGTGT
TTGGTTTTAGTCTTTTTTCAGAAAGCTTTTTTAATTTAAAGAATATATCT
ATTCACAGACACGTGTTTCGTCCGTCCCAGGACTCATCAATGCGGTTCGG
GTAAGCAAGCATAGACTGCTGTTGTCACCAGAGTGCTCAAAACACTAAGT
GGCGAGCTTTGCATACTCGCTTGTGATGAACGGAGAAGCAGAGCTTGCTC
CTCAACAGAGTCTATAGAATGCTCAAAGAACCGAATTCATTAAAGAGCTA
TTTAAAGAATACAATTGGACAAGACCTCAATCTTAGTTGCTGGAATTTGA
ATTATTATAATATTTCTCATCATTTTTTAACCTCGAAATTTTGAAATGGA
TTTATGAACTCGTTCTACATGGTATTGAGCACCCTTTCAATCGATGTTTA
TGTTTAACAATAATATACATATTTTCTAATGAGTTTATGAGAATTGTGAT
ACAAGAGTTAAGGTTGTGTAGGACGTTCGACACTATTCATCATATGTCAC
TACTCTCGGGTACCTAATAGCAGGGGAATTGGAATAAGCGAGGGGGCGGG
GTTGGAATAAAAATGTCATGGGAGGAAAATTTTTTTAAAGGAGGCTAATA
CAGCTGAATTAGGACAAAAGAGGCAACTTTCAAAAACATTTTCCCAAAAA
TTAATAAGCGGTGGGGGGGGGGGTTGGAGTAAGAATGTCCTTTGTGGAAA
ATTTTCGAAAAATTTATTAGCGGAGGGGGGACGGCTATTAGGTACCCGAG
AGTACAATGACTTCATGAAATATGTAACTTTTCTGTTGTTTTTTTGTACG
TAATCATTGTGTATGAAACTATAGTCCTTATAAACCACTGGTCTGGAAGC
ATAAAGTTTTTTTCTTTTTGTTAGCTTTTTCTTTGTTATTATCAAAAGAT
GTAAATCGATTTGCTCAGTTTTTGATCACGTTACCAAGTACTCCTCTTGG
GATTGGTCTAAGATTTAATCACATGATCAAAAAGTAAGCAAAACAAACTA
ATTTCCCAACATAAGGTTCAAGAAAGAAACCAATGGAAAGAAACAAAAAG
CTTCCAGACTGGGGTTTATTGTACGGACTATGATGAAACGAAGTACAGCT
CTCAAGTTTCATCTTGATATAAGATTGCTCCTTTTTTTCTTCACAACCAG
GTGACGATGAGCCTGTTAAAGAACAATCTGCTAGCGACAGTGAAACAAAT
ACAAAAGAAAACGAAAATGAAGACATGGCTGAATAA Coding sequence (CDS) from alignment at sc0000287_pilon:415037..421672- >XLOC_041841 ID=XLOC_041841|Name=XLOC_041841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000287_pilon:415037..421672- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCCTTGTTTCATCTGTGTTATCAAAGTTAACAAAGATGGGCCTTGT
TTCATCTGTGTTATCAAAGTTAACAAAGAAAAAGATAACAACCAAGGAAA
GATTGGAAAAAATTGAAGAGAAAAAGATAACAACCAAGGAAAGATTGGAA
AAAATTGAAGAGGATATCGAAAACATTCAAAATCTACTGAAAAGGAATCG
CGAAAAACAACGTTCAGCTGTATTGTTTTTACTGGTCACATCAATCTCAA
TATATCTGATATGTGCTGCAGTGTTCTATTTATTTTACATGCCCAAAAAG
TTGGTTGATCGGTTGCTTTTCTTGGTACCATTCCTACTCTTCCCCTTTCT
GATATCGAAAACATTCAAAATCTACTGAAAAGGAATCGCGAAAAACAACG
TTCAGCTGTATTGTTTTTACTGGTCACATCAATCTCAATATATCTGATAT
GTGCTGCAGTGTTCTATTTATTTTACATGCCCAAAAAGTTGGTTGATCGG
TTGCTTTTCTTGGTACCATTCCTACTCTTCCCCTTTCTTGTTATTGGTTT
GAAGAAGCTATTACATTATGTATTTGTCACAAGAATTGCAAAAAATATGT
TATTGGTTTGAAGAAGCTATTACATTATGTATTTGTCACAAGAATTGCAA
AAAATAGTCGACAACTGGAAGATTTAAAAAAGGAGAAGCAAAAGATTGTC
GACAACTGGAAGATTTAAAAAAGGAGAAGCAAAAGATTCTAGAAAATGTG
ATGGAAACTGAGACGTACAAAGTTGCAAAAGAAATATTGGAAAAGTTTGA
TCCCAACAGAAAACTTGTAGAGCTAGAAAATGTGATGGAAACTGAGACGT
ACAAAGTTGCAAAAGAAATATTGGAAAAGTTTGATCCCAACAGAAAACTT
GTAGAGAAAGATAAAAATGAGAAGAAAACACCACAACCCCAGCAAGCTAA
TGGAACAGAAAGATAAAAATGAGAAGAAAACACCACAACCCCAGCAAGCT
AATGGAACAGAATTACGCAAAAGGGCTGGGCAACAGCAGCAACCACATCC
AAGACAAATGATGACACCACGTCCAATGATCGCATCAACACCACAAATGA
TGAATAATAATGGAACACCATTCCCACCAAGGATGCCTCAACAACAGTTC
CAAGGTACTCCACACTTCAGGGAATTACGCAAAAGGGCTGGGCAACAGCA
GCAACCACATCCAAGACAAATGATGACACCACGTCCAATGATCGCATCAA
CACCACAAATGATGAATAATAATGGAACACCATTCCCACCAAGGATGCCT
CAACAACAGTTCCAAGGTACTCCACACTTCAGGGGGCCACACCCAGGCAT
GCCTCGTCCAGCTACTCCAGCTCCAATTCTACCAAGAGATAGATCAATCG
TCGATAAAGGCCACACCCAGGCATGCCTCGTCCAGCTACTCCAGCTCCAA
TTCTACCAAGAGATAGATCAATCGTCGATAAAGTGGCAGAGTATTTTGTT
GGTGATGGACCAAGTAATCGATATGCACTGATTTGTAAACAATGTGCTGG
TCATAATGGAATGGCTCTAGCTGAAGAATTCATGTTTATTGGTGGCAGAG
TATTTTGTTGGTGATGGACCAAGTAATCGATATGCACTGATTTGTAAACA
ATGTGCTGGTCATAATGGAATGGCTCTAGCTGAAGAATTCATGTTTATTG
CATATAAATGCTGTTACTGTGGTATGCTCAACCCGGCACGCAAGCAGCGT
CTACAAGCACCGAAGCTAGAGAAACCTAAACAAACATTATCCAGAGAGAA
CTCAACGTCTTCATTGAACCAAACTCAATCATCAGGAGCAGAAGAAGATG
AGGATAGTAAGGAAGAAGGAGAAGATGAAACAAAACAACGGAGGAGTGGT
ATAAATGAAGAAGAAAATGAGGAAAGTCCAACTCATTCTGATGATGATAA
AAATGATGTTCAAGCATATAAATGCTGTTACTGTGGTATGCTCAACCCGG
CACGCAAGCAGCGTCTACAAGCACCGAAGCTAGAGAAACCTAAACAAACA
TTATCCAGAGAGAACTCAACGTCTTCATTGAACCAAACTCAATCATCAGG
AGCAGAAGAAGATGAGGATAGTAAGGAAGAAGGAGAAGATGAAACAAAAC
AACGGAGGAGTGGTATAAATGAAGAAGAAAATGAGGAAAGTCCAACTCAT
TCTGATGATGATAAAAATGATGTTCAAGGTGACGATGAGCCTGTTAAAGA
ACAATCTGCTAGCGACAGTGAAACAAATACAAAAGAAAACGAAAATGAAG
ACATGGCTGAATAAGTGACGATGAGCCTGTTAAAGAACAATCTGCTAGCG
ACAGTGAAACAAATACAAAAGAAAACGAAAATGAAGACATGGCTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287_pilon | genome | sc0000287_pilon:415037..421672 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1120-1203:85 |
| Aaloc | 1021-1116:1367 |
| Aaloc | 853-1017:1532 |
| Aaloc | 742-849:2113 |
| Aaloc | 670-741:3552 |
| Aaloc | 508-666:4036 |
| Aaloc | 454-504:4230 |
| Aaloc | 370-453:4638 |
| Aaloc | 331-369:5572 |
| Aaloc | 271-327:5739 |
| Aaloc | 82-267:6219 |
| Aaloc | 40-81:6498 |
| Aaloc | 1-39:6637 |
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