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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000035_pilon:148276..153013+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041833 ID=XLOC_041833|Name=XLOC_041833|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4738bp|location=Sequence derived from alignment at sc0000035_pilon:148276..153013+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAATCCAGATAGTGAGAAAACTCCATTAATCAATAAATCTGGACA
TCATGTTTATAAGCTGTACACAAGAAGGTGGTTTGTTTTGGCTGTAGTTG
CATTGTTTAATGTAACCAACGCTATGGTAAGAAATGCTTGAAAATTACGA
ACAAGACTGTTTACTGACATCCATAGAAGCAAATTGCCAGTCTCTTTGCC
AGTAATTTgcaatttttaagcataaaaatttatctgttttttttcttctg
aaaaatgGAGTTTAAACATAGTGGTATTAATTGTCTTTTGAATAGCTAGA
TTTTTGGTCACATTTTAAACAGCCCAGATGTATATTTATAGAAAGCCAAT
AGAATTTAATCTTCACTTCTTTTTTCGACTCTCATCTAGATATGGATAAC
ATTTGCTCCTGTGACAAACTTTGCAGCatcttattttgaaatttctgaga
AGTCAGTGAATTACTTCTCACTTGTATATTTCATCGCTTCACTGCCGATG
GGCGGACTCTCTTGGTGGACTATTGAAACATATGGATTTCGATTTTCAGT
ATGTTAATTATGTTGTACCTTAgttttccaatattttcccattttctatt
attttgtttgataatttcaagttttgagattgtttATTATTCAGTACTAT
TAAGTAGTCAAAGTCttctttcaaattgatttttaggTCATATTAGGTTG
CATTGTGAATGCACTTGGTGGTGTATTACGTGTTGTTGGGGCCTATTCTT
TTCATGGTCATCTAAGATTCACCATTGTTTTGGTTGCACAAATCCTCTCT
GCTTGCGTCCAACCTTTTGTTTTATCAATGCCCACAAAGATTGCCGCTCT
TTGGTTTGGTGATCATGAAAGAACAATAGCCAACACTATTGCCACCATGG
GTGAGAGGTTATTAGTATTCATTCCGGTAGATTTACAATCAATACATAAT
ATAGGTTCTCGTGTGTCAAAGTACTACCAAACAAAACAGCATTAACTTCT
AGGCCATTTTTATGATTATGCTTCATTTAAAAGATCAAGAAAAATAGACA
ACACATATTGGGTCTTCATCGACTAGATTTTCTAAAAAGGAAACAATAGG
GATGGACTTAAAAACAACCTACAACAATTGAAAATGGTATGGGGGTTAGG
GTACCGATACAAGGAAGACCCACTCATTCTGAATTTATAACAACATATAG
AATTTTGACTTACTCTACAGCTAATCCACTTGGAGTACTCGTTGCCAATG
GCATAGCAGCTGGGATAGTTTCTAAAGAAGATGATATTGGTCTATTGgta
tgaaaattgtttttttttcaaagaaaataccCCTCTAAACTGATGACAGG
GTTCAGGCTATATTATAGCTTTCAATAAGGATTTTCTCATCAAtgtcttt
atttatttttataaataatcTTGGAAAATCTACTTCACTATTTCAGCTTA
TTGTGACTGGTGCACCAGCAGTGATAACAGCATTGTTAGCTATATTTGGC
ATTTGGTCAAGTAAGCCACCTACACCACCATCGCCATCTGCTCTGATCGA
ACCTGTCTCCTTTTTTGTTGGAATCAAAACAGTAAAtcatttctctttaa
aaaaaaatataaacaacatACAACATAATTCAGATAAACTTTCTGGACTG
TTTCCTTGAACTTCGTTTTTCAGGAAACTTCTTTCCATTTAATTTGATCA
GCAAACTGCAGCAAATGGTCTAGTCTTATTTTCCacataaaatctaaaaa
ctttttgacatttttttttttaattactgttttgaactattttttcttta
gattttgaaGCAGAAGAAGTTCATGCTGTTGGCTTTGACATCTGGTATGG
GTATTGCAGCATTCAGCAGCATCTCGACCATAGTTCAACAGTTGATCTGT
CCTCAAGGATATTCAGATGTAAGTTTCACTTACGAGACCCAAAGTctaaa
taaattgaaagaagaatCAAAGGTATCTTACCCCTATATAAGAACCAAAt
caaccccctggacattgcaaaaCCACCCCATCATGGccatatttccaatt
ttttttcaataccccctattgaaagttctttaaacaaggaaattgtttaa
aaatccTTTCTGAcatgatattttttctttagacAACAGCTGGTATTCTT
GGGGCTTTAGTTATTGTTGGAGGATTTGTAGGCGCTGGACTATCAGGTTA
TTATGTTGACAATACAAGAAAGTACATTGATATATCAAAGATTCTTGGTA
TATTGTTTGGTTTTAGTGGCTCACTGTGCTTGATTGTAAGTTATTTCTCT
ATCATCGGTCTATATGGTAAGTTAATTGGTTGACTTGCCAGTACAAGAAA
TATTACCTTCCTTTAAAGTGTCCATTAAACGAAAAGATAGTAAGTTAGCG
ACCATTTCCTTACCTGTCTACCGAAAGATAGGACCACTCCTTTTTCTACA
TTTCGCTACACACCCTTGATACTTCCCTTTAGTTGCTTAACACGAGACTT
CAAGCTGCTTCAAGAAACATTTCTATGTCTCTAGTATAACCTGGCTAGAT
CAAACCAAAAACCTTGTACATCATCAGTGTTTTTCAACATTGATTTTCCT
TTTGCAAAGAATCTAAAGGGACAAGGTTTCTATTGAAACTTTGCTGAATT
TTACATAATTGTATTATTAtttcgattaaaaataaaaatctgatgGTTGT
CCTGTATCTTTTGTGTTCGTGAATTTTTCAGGCAGTGAACTTAAGAGATA
TGGTTGCATTCAATTACATAGCATTCACATTATACGGATTGACTGGACTT
GGTGTGTTaccggtatttcttgaattagGTGTGGAATGTACATATCCTGT
TGATGAAGCAACATCCTCTGGTATTCAATGGATGATTGggtaatttgaat
cttttttggGTATCCTTTCgcaattgtcaattttttctgaaaaggaTTTT
GCATAATGAGCTAACTTGTTTTCAAACTCTGTGTGTCAGAATTATGCATA
TTCGGCATAACTCACATTATGGGATCATTCAATGTGGGATGTTAGCTGGG
CAAGCCAAACAACCAGATGTTCTTgacttgaatttattttttggacctac
ctggaggtcctataaattaaccgtccgtccgtccgtttgtctgttaccag
cttttctcgagattggctcattagttttttctgatttttggcacaaatat
gcaaaatggcaatgcccaaaatatgacggagcccgattttctaaaaaaac
atttttccggccgaaaatgccggaaatatgccggaaaaactttttttttt
tgcattttctcgagatttcatcattagttttttctgattttttgcacaaa
gatgcgtattagcaatgcccaaaacatggtcgagtccaatttttgaggaa
aattcttgtccggccaaaaatgccggaaatatgctggaaatcgccgtttt
tgcagattttcatcggactttttccttatttcgttgttttttcacacaaa
aacaatattaatagcaatgcccaccataaagcatggttcaattgtcaata
aaactgatttttgaagccggaacttactaaaaatcgccggaacagccgat
tttcgccggaaaaacggtattacttgaatttctcaagctgtactttatat
tttttcatgaaattttgcacactgatgcaaaacgtcaatacctaaaatgt
gacggagcccgattttcgaaaaacggccagaaatatgccggaaaaaacgg
tttttaggcattttcttgagatttcatcattagttttttctgtttttttg
cacaaagatgcgtattagcaatgcccaaaatatggctgagtccgattttt
gagaaaaattctttcccgGTCGATAATGCCGGAAATACTCCGGAAATCAT
CGTTGTTGCagatttttccttgtatttctagtTTTTTCAACATAAAATAT
TGTTGATAGCAATTAATTcccaatatttttaaaaaattgctgGAGCAGCC
AATTGCCGTGCCCGCAAAAcgaattttcttcaatttctcaaGTCTTACTC
AATATTTCATTCATGTATTTTTGCTCTATTCTTTCGCTCGCTCTTTCATT
CGTTTACACGTTCGCTCGTTCGTTCGATCGCTCATTTTTTCGCTTAGCTT
TTCCATTAATGTCTATGTTTTCTCTCATTTGGCTAACTTTCGTCATCAGG
TAGGTTCAATCAGCATCCAGCTTGTTCTGGCCTCTTCTGTATGGTTATAG
AATTTTCCACAGCTAGTGATTCTATAAAATTTAAGCTTCTTAAAATAATA
ACCAGAAGCTTAATGTTTAAGATGTCAAGATGTCTTTGGGAGAATAAAAT
CTATTACTTTCTGATACTGTGAACAGCgaattgattttttcctttttgaa
atGGTTTCACCTGTATAATTATAATATAATTCATTTCTTACAGACAAGTA
ATTGGAGCCATCTTATTTTTCATTGGTCTCGAGGCTTCACCAAAACTGTC
AGCAGCTGATCTAGCAGATTCAACGTGCAAAGCTGAACATGACATTGAcc
ctttaaatttttcaacttaCGCAATAGTAGTGACAGTTTTAGCATCAAGT
ATTGGGATTTTATTTATAATGTTCTTCGATACGGATTATAAGAGACTACA
AGCTGAACGGGAACTTGATGCTGATATAACTGACCAAGAACCACACCCAA
ACACAGAAGATGCAAGAAATATTCCCAATATTATCTAA Coding sequence (CDS) from alignment at sc0000035_pilon:148276..153013+ >XLOC_041833 ID=XLOC_041833|Name=XLOC_041833|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2868bp|location=Sequence derived from alignment at sc0000035_pilon:148276..153013+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAATCCAGATAGTGAGAAAACTCCATTAATCAATAAATCTGGACA
TCATGTTTATAAGCTGTACACAAGAAGGTGGTTTGTTTTGGCTGTAGTTG
CATTGTTTAATGTAACCAACGCTATGATGAGAAATCCAGATAGTGAGAAA
ACTCCATTAATCAATAAATCTGGACATCATGTTTATAAGCTGTACACAAG
AAGGTGGTTTGTTTTGGCTGTAGTTGCATTGTTTAATGTAACCAACGCTA
TGATATGGATAACATTTGCTCCTGTGACAAACTTTGCAGCatcttatttt
gaaatttctgagaAGTCAGTGAATTACTTCTCACTTGTATATTTCATCGC
TTCACTGCCGATGGGCGGACTCTCTTGGTGGACTATTGAAACATATGGAT
TTCGATTTTCAATATGGATAACATTTGCTCCTGTGACAAACTTTGCAGCa
tcttattttgaaatttctgagaAGTCAGTGAATTACTTCTCACTTGTATA
TTTCATCGCTTCACTGCCGATGGGCGGACTCTCTTGGTGGACTATTGAAA
CATATGGATTTCGATTTTCAgTCATATTAGGTTGCATTGTGAATGCACTT
GGTGGTGTATTACGTGTTGTTGGGGCCTATTCTTTTCATGGTCATCTAAG
ATTCACCATTGTTTTGGTTGCACAAATCCTCTCTGCTTGCGTCCAACCTT
TTGTTTTATCAATGCCCACAAAGATTGCCGCTCTTTGGTTTGGTGATCAT
GAAAGAACAATAGCCAACACTATTGCCACCATGGgTCATATTAGGTTGCA
TTGTGAATGCACTTGGTGGTGTATTACGTGTTGTTGGGGCCTATTCTTTT
CATGGTCATCTAAGATTCACCATTGTTTTGGTTGCACAAATCCTCTCTGC
TTGCGTCCAACCTTTTGTTTTATCAATGCCCACAAAGATTGCCGCTCTTT
GGTTTGGTGATCATGAAAGAACAATAGCCAACACTATTGCCACCATGGCT
AATCCACTTGGAGTACTCGTTGCCAATGGCATAGCAGCTGGGATAGTTTC
TAAAGAAGATGATATTGGTCTATTGCTAATCCACTTGGAGTACTCGTTGC
CAATGGCATAGCAGCTGGGATAGTTTCTAAAGAAGATGATATTGGTCTAT
TGCTTATTGTGACTGGTGCACCAGCAGTGATAACAGCATTGTTAGCTATA
TTTGGCATTTGGTCAAGTAAGCCACCTACACCACCATCGCCATCTGCTCT
GATCGAACCTGTCTCCTTTTTTGTTGGAATCAAAACACTTATTGTGACTG
GTGCACCAGCAGTGATAACAGCATTGTTAGCTATATTTGGCATTTGGTCA
AGTAAGCCACCTACACCACCATCGCCATCTGCTCTGATCGAACCTGTCTC
CTTTTTTGTTGGAATCAAAACAattttgaaGCAGAAGAAGTTCATGCTGT
TGGCTTTGACATCTGGTATGGGTATTGCAGCATTCAGCAGCATCTCGACC
ATAGTTCAACAGTTGATCTGTCCTCAAGGATATTCAGATattttgaaGCA
GAAGAAGTTCATGCTGTTGGCTTTGACATCTGGTATGGGTATTGCAGCAT
TCAGCAGCATCTCGACCATAGTTCAACAGTTGATCTGTCCTCAAGGATAT
TCAGATacAACAGCTGGTATTCTTGGGGCTTTAGTTATTGTTGGAGGATT
TGTAGGCGCTGGACTATCAGGTTATTATGTTGACAATACAAGAAAGTACA
TTGATATATCAAAGATTCTTGGTATATTGTTTGGTTTTAGTGGCTCACTG
TGCTTGATTacAACAGCTGGTATTCTTGGGGCTTTAGTTATTGTTGGAGG
ATTTGTAGGCGCTGGACTATCAGGTTATTATGTTGACAATACAAGAAAGT
ACATTGATATATCAAAGATTCTTGGTATATTGTTTGGTTTTAGTGGCTCA
CTGTGCTTGATTGCAGTGAACTTAAGAGATATGGTTGCATTCAATTACAT
AGCATTCACATTATACGGATTGACTGGACTTGGTGTGTTaccggtatttc
ttgaattagGTGTGGAATGTACATATCCTGTTGATGAAGCAACATCCTCT
GGTATTCAATGGATGATTGgGCAGTGAACTTAAGAGATATGGTTGCATTC
AATTACATAGCATTCACATTATACGGATTGACTGGACTTGGTGTGTTacc
ggtatttcttgaattagGTGTGGAATGTACATATCCTGTTGATGAAGCAA
CATCCTCTGGTATTCAATGGATGATTGgACAAGTAATTGGAGCCATCTTA
TTTTTCATTGGTCTCGAGGCTTCACCAAAACTGTCAGCAGCTGATCTAGC
AGATTCAACGTGCAAAGCTGAACATGACATTGAccctttaaatttttcaa
cttaCGCAATAGTAGTGACAGTTTTAGCATCAAGTATTGGGATTTTATTT
ATAATGTTCTTCGATACGGATTATAAGAGACTACAAGCTGAACGGGAACT
TGATGCTGATATAACTGACCAAGAACCACACCCAAACACAGAAGATGCAA
GAAATATTCCCAATATTATCTAAACAAGTAATTGGAGCCATCTTATTTTT
CATTGGTCTCGAGGCTTCACCAAAACTGTCAGCAGCTGATCTAGCAGATT
CAACGTGCAAAGCTGAACATGACATTGAccctttaaatttttcaacttaC
GCAATAGTAGTGACAGTTTTAGCATCAAGTATTGGGATTTTATTTATAAT
GTTCTTCGATACGGATTATAAGAGACTACAAGCTGAACGGGAACTTGATG
CTGATATAACTGACCAAGAACCACACCCAAACACAGAAGATGCAAGAAAT
ATTCCCAATATTATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000035_pilon | genome | sc0000035_pilon:148276..153013 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1141-1434:4445 |
| Aaloc | 982-1137:2732 |
| Aaloc | 829-981:2133 |
| Aaloc | 712-828:1802 |
| Aaloc | 577-711:1447 |
| Aaloc | 502-576:1223 |
| Aaloc | 286-498:687 |
| Aaloc | 127-285:390 |
| Aaloc | 1-126:1 |
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