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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000251_pilon:272706..277337+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041825 ID=XLOC_041825|Name=XLOC_041825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4632bp|location=Sequence derived from alignment at sc0000251_pilon:272706..277337+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATACAACT
TGGGGTAAGTACTGTCATCTGATACCAGTTTTTCAGAACTTCATTTCCCA
CGTGCTAGAATCACAACTCTCAAATTCTTCAGGTTTTACGAAATGGCAAC
TACAGCTTTTTAACTCATTTAACTGTGGCCAAggtattttagtgaaaaag
ccCGATGAGAGAGAAATATAATCTCTTGACTGACAGTCATTTTAACTTGA
AAATCTAGTAGTGAGCTTCCCGCTGAATGATCGATGATATATAATTTGAG
CCTTATTTCTGCGCTCCCAATTTTATATTAGTCTAGTTCAGTGCGGGTCG
AGTAGCTGATAACAGTTTATCATACTTTAGCTTCCTTCTGAAGTGTGTGA
TTAAAGGCATTAAATAAACCTAGAGTATCTCTCACACAAGATAACAGTCG
ATTTTCCCCCTTCATATGATTTACTACGTGTTAATCCTTGGTATCTATTT
TCATACCGTTATTgtgattttgtgaaatttgagaCCTTCATATATTTGGT
TGATTGACACTCTCGACTCCAGGCCTTATCTgacccccttacgctattga
tgacTCTGATTTAACGTTTTGACGGGAGATGTAAGAGCCTTAAACGATTC
CTCCAGTTTTACGGCACTGGACTCTTTACGTCGAAGAATCGTTTAACGTC
CCTGGCACGCGTGGGTTGGTTGATTGAAAGTCTGTCAATcatactgAaaa
aatAaaaatactgaACTATTGCTCGGTAATCAATCCAGGTTAACTTATCC
CAAGTGCAATACAGTTAAAGCTTtataattcaattttatttaaggGGAAA
GGGATTTTAATCACGGGAGCTTCTCGAATAATAGAATGTGCAAAGGGTGT
TAATGAGAGAAATTTGCCAGTGACTTTTCAATTAGATCGAAAACAGGAAT
AACAaaaatgtcgaattagagagcatcaactgtaatAGTTTTTTGGCTAG
TTTTAGAACAATCCTAAAGGTTGCATGAAAACATCTCTTTTTCGATGGTC
AAGGATCTCAAATTATTATTTACCGTTCAATAAGTCCAATGTCTTAGTCT
AATGAAGATATTGTTCTGGTAGGGACTGAAATATTTGGATATATCATGGA
GGAAAATTAGATATATGATAATTTATTGTATAtcgtattttttcaaaatt
cgagCTAAATTTGACCCGTTTCTACATCCCtaaattgacatttttgtaCT
TAAAATAACCCGGTGGGACCCCAAACCCATTAGAAAATATGTTCAAAATT
TCATCCTAAAGTgggaaattttctttgatttcatcccgatttttaaattg
atatttttgtacCTAAAATAACCCGGTGGGACCCCAAACCCATTGGAAAA
TATGTTCAAAATTTCGTCCGAAGTGGGAAATTGCCTTTGATTTCATCCCG
ATTtttggagcaatagaatttctagCCCCATAGGGATATCGATAGGAATC
TTTATCCCCATGTTGGAAAAAGATTCCACCGAGCTggtgagacagggatg
tcttAAATAATAAGGAAAAGGCAAATttactcaggtgagttaaggcaagt
ttcaaacatattttgcgtgacgcgcaccgcttcccattgttccttaactt
tcgtatatagctcaaaagaagcgtattaaggagaggatttcggaaagtgc
tgGgccgaaaatttaaattaagccaatctcaagatatcggccaaaaactg
atttttacgttaggaaatacgtcgaaaaaacacgtcaaaaagacaagtta
aatgacgtcatatttaaaaacagcgataacttcgattACATTGCTACAAA
TAACACCAAATTTTGACTGGAGACGTAGATTAACGATTCTAAAATATTTG
TAGAGAAATTTTCTAAATCTTTAGATGACGTCATTTACTGTCGGTAAAAA
TTAAAATACGTCAAATAATGATGACGTCATCAAAAATTTTCAAATTTTTT
TCATGCAATATTTCAGAATTAACAATCAACCTCTCCAGTCAAAATTTAGT
GTAAATTGTAGTAATGTAATCGAAGTTATCGCTGTTTTTAAATATGACGT
CATTTAACTTGTCTTTTTGACGTGTTTTTTCGACGTATTTCCTAACGTAA
AAATCAGTTTTTGGCCGATATCTTGAGATTGGCTTAATTTAAATTTTCGG
CCcagcactttccgaaatcctctccttaatacgcttcttttgagctatat
acgaaagttaaggaacaatgggaagcggtgcgcgtcacgcaaaatatgtt
tgggacttgccttaactcacctgagtagGTTCCCATACACTTTATAAAAG
TGATATTggttataaatttttttacatttctaaACGCCCCtccaaaaaaa
catgaaaaaaccaATAAAACTCAATAAAGGCCCGGGGCGtatattcgaag
taatacgataAGTGAACGATTATCCAGTTAGTCCAGTTAATCGCGCAATT
CATTCTATTGCATTATTTCATGACGCACAtcaataaattgttttttagcA
ATACGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGCTTCGGGAAAG
CTATTTTACCGAACGGTGATACTTACGAAGGAGAGTATGACCATGGAAAG
AGACATGGTTATGGAACGTATAGATTCAAAAATGGTGCCAAATATGTTGG
AGATTATTTGAATGGTAAAAAACATGGGCAAGGTAAGAGACTgctcatct
aacgtttccagaccataaaaaaaacgacaaataactattaaaaagcgaca
aacagaacgacaaaccctaaccTTAGCTaccaaagaacgacatatttcgc
cgtcccaAACCCTTACCTTGGCAACTACCACCCCTACATATTCATTGCTT
TTTGTACTTTACGCTATTTAAGAACTGGCAGTTTGAAGAACGATAAATAA
CGCATgcgtataagtctctatttgggtgagctggaaataTTTGATGAGCT
AACTCTAACAATGACTTTTCAATAGAAGTCTAATTGATATAATTGAGAGT
GTGTATGGTTTCGATAGCCCTAAAGATAAACATCCATtgacggattcgtg
ctccttatattaCAATCACGGACAAAAGGTcgtagacttttcaaaatgca
tgaaaaatttcaaaacaagctCTGAAAACACATTTTACAAAGGCCAATGT
TGTTTTATTGGATTTGGAGGGTTTGGGTGACAGACAATTCCAGAAGCCAA
ATCCACTCGATTTTGaaggaaatgaatttttgaaaagtctacagactttt
tgtccatgattgtaactgcagttttgtagaggtctgtgattcagactacc
ttttcggccctttttacgccggccctaatttaacgccggcccttattacg
ctaCAGCCTGATTTTAgacttacgccaattagggccgtaaataacgcaaa
aaattgttagaatggctatttatacttcaatttacattaaaatatcattt
ttcagtagtaaactattaaaattccattgaaaattactgatttttgcaaa
gttttagatatggagtaaaacaatgaataattttttatcttcgaatcata
cctaaaatcctttaaataaagaaaaatggtcaaaaattaacgccactttt
aagtaaaatttgctgaattttggccctttttacaccggtcCTTTTAACGC
CAAGAGccaaaaaataacgccaataagggccggcgtaaaaaggaccgATA
AGGTATTAAATTCTGAAAGTCAGGCAGAGGCACCTGAACCAAAAAGAGGG
CTTTTGTAAGGACCTTGAAtctataataataatttttcggTATTTCATTT
CATTACTTAGTAAGGTTGACCTTTATGATTTTTAAGTAGCTCTTTTTGTA
CATTTCAGGAAATTTTTGGTACCCAGACGGTTCACGTTATGAAGGTAGCT
GGGTGGATGATCAACGTAACGGTATCGGGACGTATTATTACGTCAACGGA
GATTCGTATCAAGGTGAATGGTACATGCACCGTAGACACGGGCAAGGAAC
GTATACGTACGCCGTTACGGGAAGTCAATACCGTGGGACGTGGGATGAAG
GAAAGAAGAAAGGATCAGGAGAAATGATACACGCTAATCATAAATATTTA
GGTAAGATTTTACAGCTTTTTATGCAATTAGACTGAGCCTAGAAGGACTA
CTTTCAGGACATTTCAGGTCTAAATTGGTTAATAAAAGGGAAGTAAACTT
GCacgatttttgcaaattttcagccaaatatctgaaaaattctgaaaagc
cAATGTAATTCGCGAATGCTAATTCTCCTGAATCTAACCTTAGTCttaaa
agttttctcaaaacaactTGAAAAGTGAAGGATTTCTACTTGAGATGAAT
CGATTATTATAATAACGAAATCATGACTTCTTGCTTTCTAGGTTTCTTTG
ATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTCGATATTGGATGC
GATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGTTGAAGACTTTAG
TAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTGTGTGGGAAAGTA
AAGGGAAAATGACATCTTTGGGTACCAATTAA Coding sequence (CDS) from alignment at sc0000251_pilon:272706..277337+ >XLOC_041825 ID=XLOC_041825|Name=XLOC_041825|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000251_pilon:272706..277337+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATACAACT
TGGGatgtcGGATATCAGTGAAGATTATGATGATGAAGACGAAACGATAC
AACTTGGGcAATACGATGGAGGGCGTAACGATGGTGGAGAGCGTCATGGC
TTCGGGAAAGCTATTTTACCGAACGGTGATACTTACGAAGGAGAGTATGA
CCATGGAAAGAGACATGGTTATGGAACGTATAGATTCAAAAATGGTGCCA
AATATGTTGGAGATTATTTGAATGGTAAAAAACATGGGCAAGcAATACGA
TGGAGGGCGTAACGATGGTGGAGAGCGTCATGGCTTCGGGAAAGCTATTT
TACCGAACGGTGATACTTACGAAGGAGAGTATGACCATGGAAAGAGACAT
GGTTATGGAACGTATAGATTCAAAAATGGTGCCAAATATGTTGGAGATTA
TTTGAATGGTAAAAAACATGGGCAAGGAAATTTTTGGTACCCAGACGGTT
CACGTTATGAAGGTAGCTGGGTGGATGATCAACGTAACGGTATCGGGACG
TATTATTACGTCAACGGAGATTCGTATCAAGGTGAATGGTACATGCACCG
TAGACACGGGCAAGGAACGTATACGTACGCCGTTACGGGAAGTCAATACC
GTGGGACGTGGGATGAAGGAAAGAAGAAAGGATCAGGAGAAATGATACAC
GCTAATCATAAATATTTAGGAAATTTTTGGTACCCAGACGGTTCACGTTA
TGAAGGTAGCTGGGTGGATGATCAACGTAACGGTATCGGGACGTATTATT
ACGTCAACGGAGATTCGTATCAAGGTGAATGGTACATGCACCGTAGACAC
GGGCAAGGAACGTATACGTACGCCGTTACGGGAAGTCAATACCGTGGGAC
GTGGGATGAAGGAAAGAAGAAAGGATCAGGAGAAATGATACACGCTAATC
ATAAATATTTAGGTTTCTTTGATGAAGACATGCCGAAAGGCCGTGGTAAA
TACAAATTCGATATTGGATGCGATTTACATGGTGAATATCAAATCGTTGA
AGAGGTCGTTGAAGACTTTAGTAATGAAGATGAAGAACCAACAGTTTATT
TGAAGTCTGTGTGGGAAAGTAAAGGGAAAATGACATCTTTGGGTACCAAT
TAAGTTTCTTTGATGAAGACATGCCGAAAGGCCGTGGTAAATACAAATTC
GATATTGGATGCGATTTACATGGTGAATATCAAATCGTTGAAGAGGTCGT
TGAAGACTTTAGTAATGAAGATGAAGAACCAACAGTTTATTTGAAGTCTG
TGTGGGAAAGTAAAGGGAAAATGACATCTTTGGGTACCAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000251_pilon | genome | sc0000251_pilon:272706..277337 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 484-672:4444 |
| Aaloc | 241-480:3911 |
| Aaloc | 55-237:2549 |
| Aaloc | 1-54:1 |
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