XLOC_041805 (mRNA) -

Overview
NameXLOC_041805
Unique NameXLOC_041805
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000172_pilon:334576..335544-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041805 ID=XLOC_041805|Name=XLOC_041805|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=969bp|location=Sequence derived from alignment at sc0000172_pilon:334576..335544- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTATTGAACGACTGGTGCGAAGAAACAACTGTAAAGGTAAAAGA AACTTTTATTTTTTACGTTATTTTGCTCACGTACCTTATTAGGTGGATAA TCGAAACTACCTTTCGCGAAAAAGACTGAAATTCGCGAAAATTCATCCAC CGATTCTTGTCCCAATTAAGGGCTCTGACCATAGTCAGAAAATCGGTTAT GTGATTTGAAGATATATATGTTACGGCTATTTTATTTCATTTAAATTCAA TTACTTTATATATCTTTCTCTGAAGGAAATTGCCACCGCATACGATTTGT CAATGGGAACAGCTAGTGGTCATCTAACTCACTTTCGAGAACTCTATCAA TCTTGGTTAGTTGACATCGAACCACAGTTTTTGGGTGGAGAAGGAAAGCA TGTTTTGATAAAGAAGTTAAAGGTAAAGAATTTCATTTTTGTTGCTTATT CTTACAACATGAGATATATTCATTTTAAAAACACCGTTATATTCGCTACA TAAAATAGAGGGTTTTATGCTATGTGGATAAAAATGCTTATTCACGCAAA ATGGTTCTAATTTTACGGTTATCATCTTTGTTTATTCTATAATTAGTTAA CAGAAAAATTTTGTTCTTTAGAATTGTTCAGGAGATTGCAACATCCTGCT AATGATCGAAGACCATTCGAGGATTGGTTTGCTTCTGCATAATCGGGAAG AAACATACGAGCATATCCTTCAAGTACCAGTAAAGATGGGAACTTTCGTT TTTTCTGAAACAGTAATGCTTCTTCCAGCTGGATGCATGCAGTCACAGAC AACAGAACTGTTTCAAGGATCAAACACTGAGGAAGCTACAAAACATGCTA AATCTTGGCTGGCAAAAAGAAAGGGTATTCGTTGCTCTAAATCAGGCGGC TATATAAATGAATACAACTTTAGATTTTATATCAAAAGTGAATCAACTTT CAAAGATAGAATGATTCAA

Coding sequence (CDS) from alignment at sc0000172_pilon:334576..335544-

>XLOC_041805 ID=XLOC_041805|Name=XLOC_041805|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000172_pilon:334576..335544- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTATTGAACGACTGGTGCGAAGAAACAACTGTAAAGATGAAAGT
ATTGAACGACTGGTGCGAAGAAACAACTGTAAAGGAAATTGCCACCGCAT
ACGATTTGTCAATGGGAACAGCTAGTGGTCATCTAACTCACTTTCGAGAA
CTCTATCAATCTTGGTTAGTTGACATCGAACCACAGTTTTTGGGTGGAGA
AGGAAAGCATGTTTTGATAAAGAAGTTAAAGGAAATTGCCACCGCATACG
ATTTGTCAATGGGAACAGCTAGTGGTCATCTAACTCACTTTCGAGAACTC
TATCAATCTTGGTTAGTTGACATCGAACCACAGTTTTTGGGTGGAGAAGG
AAAGCATGTTTTGATAAAGAAGTTAAAGAATTGTTCAGGAGATTGCAACA
TCCTGCTAATGATCGAAGACCATTCGAGGATTGGTTTGCTTCTGCATAAT
CGGGAAGAAACATACGAGCATATCCTTCAAGTACCAGTAAAGATGGGAAC
TTTCGTTTTTTCTGAAACAGTAATGCTTCTTCCAGCTGGATGCATGCAGT
CACAGACAACAGAACTGTTTCAAGGATCAAACACTGAGGAAGCTACAAAA
CATGCTAAATCTTGGCTGGCAAAAAGAAAGGGTATTCGTTGCTCTAAATC
AGGCGGCTATATAAATGAATACAACTTTAGATTTTATATCAAAAGTGAAT
CAACTTTCAAAGATAGAATGATTCAAAATTGTTCAGGAGATTGCAACATC
CTGCTAATGATCGAAGACCATTCGAGGATTGGTTTGCTTCTGCATAATCG
GGAAGAAACATACGAGCATATCCTTCAAGTACCAGTAAAGATGGGAACTT
TCGTTTTTTCTGAAACAGTAATGCTTCTTCCAGCTGGATGCATGCAGTCA
CAGACAACAGAACTGTTTCAAGGATCAAACACTGAGGAAGCTACAAAACA
TGCTAAATCTTGGCTGGCAAAAAGAAAGGGTATTCGTTGCTCTAAATCAG
GCGGCTATATAAATGAATACAACTTTAGATTTTATATCAAAAGTGAATCA
ACTTTCAAAGATAGAATGATTCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041805XLOC_041805-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000172_pilongenomesc0000172_pilon:334576..335544 -
Properties
Property NameValue
Aaloc190-537:349
Aaloc43-189:695
Aaloc1-42:970