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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000433_pilon:162455..164203+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041793 ID=XLOC_041793|Name=XLOC_041793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1749bp|location=Sequence derived from alignment at sc0000433_pilon:162455..164203+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTGTTAGTCATTTTGATACCGACGCTGATTTTAATTATCATGCAGAT
TTACTCGCGACTTAAGAAAGGGAAATTGACAGCACAAGCACCATTCCTGT
TCCTGCAGGACAATGACCGAAAtcgattgatgacgtcattagcGTTTGGC
CACCTTTCGCTCcgtgtttttaacattttctccgGAAATGGCCAAAAAGC
TGTTGCACTAGCACTTTGCTCAAGAATATCAGATCAACCAGAATATTACC
TGTGTTCATTTTTCTCAACGATCTTGTTAGCAACTTTATATGGGTTTTTA
GCTTTCCCATTTTTTGCTTTGATCTCCTCTCCGCATTTACTGGTTTCGTC
GATTGTTGGAATCGGATTTACCGTTTGGGAGATTGTTTATCTCGGACTAC
AGTTTGACTATAACGATGGCTGTAATTTGAAAGCTACCTTACAACGAATC
ACTGCAATACTTGTGATAcctaatttcatttttcttgctGTCATCTTGTT
TGGTTTCGGATATCGCTTATACACATGCTTCAAAACAGGATGTTATGAAC
TTCCAACGAACGAGAAAAGCGTCGTAGATACACATCAAATCCtgtatttg
aaaaatcttctacaaaggaaaaatatttcaaaacagtcACAGTTAACTCT
gtttcaaaaactgaaaaatgttttcaaaccGTGGTTTAAATTTCCTGGTG
AAATTCTTCAATGTATGTCTGTGATTTTCGTCTTGCTGTATTTGATTCTG
TTTCTAATACAATACCAAGGGTTAAAATTACTCTACAAGTTCTTAAAGGT
ACTGGGAACTAATCCTAACACAGACATCGAAGCAGTCTGGTATTTAGCGT
TGGTCATCAGTATTGTCTTGTACCTGGTCATGGTGGTTCATTTTTTGTAT
TGTTACCAAAATGATACTCTGGCAATATACACGGGAAATCACAACCTCTA
CCGGAAAGATGATGGTTGCCATAATATCGCTTTGTACCATCGATTGGTGT
TTCCAGCATACTTAATCAGTGCAATGTTCATTGGTTTTATATGTTGTTAT
GTGTTGGTTGGTATCAGTGTTGGGATTGTTTATCTCCTAGCAGCTATAGC
AACAGGATCACAAGTCTTGATATTGCTTCGCTACACATTATCTTTCGTTG
GCACTGGTATCGTTTTTAAAATCATCCAACGCTTAAGCATCCGTTATTAT
TTCTCCGATTTGGAATCATCAAAGCTTCAGATTAATTTAAAGCATCCACG
TTTGTTTTACGTTCTAtccttctttttattcttcgtGAATGTGTTCACGG
GTCTGATGTCCCTGGTCAAACGTCTCTTATTCATCATTTTCAGTTTTCTG
TTGTTTTACGGTCGCATTGATCGTAACCCAATGATGTTCTTCAAGAGTAT
GGATATATCGAATTCGTACAGATCCTTTTTACGTGTGGAGAACGTCTTCA
AGAACCCCATCATGCGTTGCTTCTGTCAATTCCTCATGGAACCTCACATT
CGAAACATATCACAGCTCACTTCTCAACAACTCACCAGAAACGTGTGGGG
AAGCCCTTTGATTCGTGGATCGGACCGCTCGCTTCAACCAATCACCGGGt
caggaaaaagcgggaaagTGGCGCGAAACCGTTGGTACGTCGCGTACACA
CTACTACGCAACCCAGGTTTGACCAATGAACGATACCATGGTAGGTATCG
AGATAACAGTCGAATCATACCCTCGGAAAACGGAAGCATTAATGCGTGA Coding sequence (CDS) from alignment at sc0000433_pilon:162455..164203+ >XLOC_041793 ID=XLOC_041793|Name=XLOC_041793|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3498bp|location=Sequence derived from alignment at sc0000433_pilon:162455..164203+ (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTGTTAGTCATTTTGATACCGACGCTGATTTTAATTATCATGCAGAT
TTACTCGCGACTTAAGAAAGGGAAATTGACAGCACAAGCACCATTCCTGT
TCCTGCAGGACAATGACCGAAAtcgattgatgacgtcattagcGTTTGGC
CACCTTTCGCTCcgtgtttttaacattttctccgGAAATGGCCAAAAAGC
TGTTGCACTAGCACTTTGCTCAAGAATATCAGATCAACCAGAATATTACC
TGTGTTCATTTTTCTCAACGATCTTGTTAGCAACTTTATATGGGTTTTTA
GCTTTCCCATTTTTTGCTTTGATCTCCTCTCCGCATTTACTGGTTTCGTC
GATTGTTGGAATCGGATTTACCGTTTGGGAGATTGTTTATCTCGGACTAC
AGTTTGACTATAACGATGGCTGTAATTTGAAAGCTACCTTACAACGAATC
ACTGCAATACTTGTGATAcctaatttcatttttcttgctGTCATCTTGTT
TGGTTTCGGATATCGCTTATACACATGCTTCAAAACAGGATGTTATGAAC
TTCCAACGAACGAGAAAAGCGTCGTAGATACACATCAAATCCtgtatttg
aaaaatcttctacaaaggaaaaatatttcaaaacagtcACAGTTAACTCT
gtttcaaaaactgaaaaatgttttcaaaccGTGGTTTAAATTTCCTGGTG
AAATTCTTCAATGTATGTCTGTGATTTTCGTCTTGCTGTATTTGATTCTG
TTTCTAATACAATACCAAGGGTTAAAATTACTCTACAAGTTCTTAAAGGT
ACTGGGAACTAATCCTAACACAGACATCGAAGCAGTCTGGTATTTAGCGT
TGGTCATCAGTATTGTCTTGTACCTGGTCATGGTGGTTCATTTTTTGTAT
TGTTACCAAAATGATACTCTGGCAATATACACGGGAAATCACAACCTCTA
CCGGAAAGATGATGGTTGCCATAATATCGCTTTGTACCATCGATTGGTGT
TTCCAGCATACTTAATCAGTGCAATGTTCATTGGTTTTATATGTTGTTAT
GTGTTGGTTGGTATCAGTGTTGGGATTGTTTATCTCCTAGCAGCTATAGC
AACAGGATCACAAGTCTTGATATTGCTTCGCTACACATTATCTTTCGTTG
GCACTGGTATCGTTTTTAAAATCATCCAACGCTTAAGCATCCGTTATTAT
TTCTCCGATTTGGAATCATCAAAGCTTCAGATTAATTTAAAGCATCCACG
TTTGTTTTACGTTCTAtccttctttttattcttcgtGAATGTGTTCACGG
GTCTGATGTCCCTGGTCAAACGTCTCTTATTCATCATTTTCAGTTTTCTG
TTGTTTTACGGTCGCATTGATCGTAACCCAATGATGTTCTTCAAGAGTAT
GGATATATCGAATTCGTACAGATCCTTTTTACGTGTGGAGAACGTCTTCA
AGAACCCCATCATGCGTTGCTTCTGTCAATTCCTCATGGAACCTCACATT
CGAAACATATCACAGCTCACTTCTCAACAACTCACCAGAAACGTGTGGGG
AAGCCCTTTGATTCGTGGATCGGACCGCTCGCTTCAACCAATCACCGGGt
caggaaaaagcgggaaagTGGCGCGAAACCGTTGGTACGTCGCGTACACA
CTACTACGCAACCCAGGTTTGACCAATGAACGATACCATGGTAGGTATCG
AGATAACAGTCGAATCATACCCTCGGAAAACGGAAGCATTAATGCGTGAT
TGGTGTTAGTCATTTTGATACCGACGCTGATTTTAATTATCATGCAGATT
TACTCGCGACTTAAGAAAGGGAAATTGACAGCACAAGCACCATTCCTGTT
CCTGCAGGACAATGACCGAAAtcgattgatgacgtcattagcGTTTGGCC
ACCTTTCGCTCcgtgtttttaacattttctccgGAAATGGCCAAAAAGCT
GTTGCACTAGCACTTTGCTCAAGAATATCAGATCAACCAGAATATTACCT
GTGTTCATTTTTCTCAACGATCTTGTTAGCAACTTTATATGGGTTTTTAG
CTTTCCCATTTTTTGCTTTGATCTCCTCTCCGCATTTACTGGTTTCGTCG
ATTGTTGGAATCGGATTTACCGTTTGGGAGATTGTTTATCTCGGACTACA
GTTTGACTATAACGATGGCTGTAATTTGAAAGCTACCTTACAACGAATCA
CTGCAATACTTGTGATAcctaatttcatttttcttgctGTCATCTTGTTT
GGTTTCGGATATCGCTTATACACATGCTTCAAAACAGGATGTTATGAACT
TCCAACGAACGAGAAAAGCGTCGTAGATACACATCAAATCCtgtatttga
aaaatcttctacaaaggaaaaatatttcaaaacagtcACAGTTAACTCTg
tttcaaaaactgaaaaatgttttcaaaccGTGGTTTAAATTTCCTGGTGA
AATTCTTCAATGTATGTCTGTGATTTTCGTCTTGCTGTATTTGATTCTGT
TTCTAATACAATACCAAGGGTTAAAATTACTCTACAAGTTCTTAAAGGTA
CTGGGAACTAATCCTAACACAGACATCGAAGCAGTCTGGTATTTAGCGTT
GGTCATCAGTATTGTCTTGTACCTGGTCATGGTGGTTCATTTTTTGTATT
GTTACCAAAATGATACTCTGGCAATATACACGGGAAATCACAACCTCTAC
CGGAAAGATGATGGTTGCCATAATATCGCTTTGTACCATCGATTGGTGTT
TCCAGCATACTTAATCAGTGCAATGTTCATTGGTTTTATATGTTGTTATG
TGTTGGTTGGTATCAGTGTTGGGATTGTTTATCTCCTAGCAGCTATAGCA
ACAGGATCACAAGTCTTGATATTGCTTCGCTACACATTATCTTTCGTTGG
CACTGGTATCGTTTTTAAAATCATCCAACGCTTAAGCATCCGTTATTATT
TCTCCGATTTGGAATCATCAAAGCTTCAGATTAATTTAAAGCATCCACGT
TTGTTTTACGTTCTAtccttctttttattcttcgtGAATGTGTTCACGGG
TCTGATGTCCCTGGTCAAACGTCTCTTATTCATCATTTTCAGTTTTCTGT
TGTTTTACGGTCGCATTGATCGTAACCCAATGATGTTCTTCAAGAGTATG
GATATATCGAATTCGTACAGATCCTTTTTACGTGTGGAGAACGTCTTCAA
GAACCCCATCATGCGTTGCTTCTGTCAATTCCTCATGGAACCTCACATTC
GAAACATATCACAGCTCACTTCTCAACAACTCACCAGAAACGTGTGGGGA
AGCCCTTTGATTCGTGGATCGGACCGCTCGCTTCAACCAATCACCGGGtc
aggaaaaagcgggaaagTGGCGCGAAACCGTTGGTACGTCGCGTACACAC
TACTACGCAACCCAGGTTTGACCAATGAACGATACCATGGTAGGTATCGA
GATAACAGTCGAATCATACCCTCGGAAAACGGAAGCATTAATGCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000433_pilon | genome | sc0000433_pilon:162455..164203 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 832-2580:1 |
|
