XLOC_041780 (mRNA) -

Overview
NameXLOC_041780
Unique NameXLOC_041780
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000233_pilon:54167..55045+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041780 ID=XLOC_041780|Name=XLOC_041780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=879bp|location=Sequence derived from alignment at sc0000233_pilon:54167..55045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGAAGAAATCATTGATTTTGAGAATGCTCgtctgaaaatgaagaa atggaGGGAAGATATTGACAGAAACAGTGAGGAGATTGTTGAATATGGAG AATGCTTGATTGCAGAATATGCTAGCAAGCTAGGGGATGAACTCTGGGTC TTATATGAGCAGGTGTTTGTAGCTGCGTTAGATTGCTATCGCATTGACCT GGCAGAAGAATGCTTAGCAGCCCTTCATAAACAATTCCCTAAAAGCAAGC GTGTATTTAAATTACAAGGGATGTACCATGAAGCAAGACAGCAATATAGT AAAGCAGAAGCCGTTTACACCAAGATGCTCGAAGATGAGCCAGCCAATTT AGTTGCTAAGAAGCGTTTGATTGCTATGAAGAAGGCACAAAATAAATACG AAGAAACCATCCAGGAATTGAATGATTATTTAAAAGACTTCATGGCAGAC CAAGAAGCATGGATGGAATTATCAGAGCTTTACATCCATCAACAAGAGTT TGCCAAAGCAGCATTTTGTATGGAAGAGCTCATTTTGTCACATCCACACA ACCACTTATATCACCAACGATATGCCGAAATTCATTACACCATTGGTACA TCAGAATCCATGGAAAAAGCCAAAAAGTATTTTGCCCAAGCTTTGAAATT AGATCCGGGAAATGCAAGAGCTTTGTATGGTCTTTACTTAGCAGCTTCTA ATTCAGTGCAAGGGAAATCTAATACAAGCtctaaaaagaaaagtattaat TTGTCTCAGTGGACTGCTAATAAAATAGTTGATATGTATAGTATGCAGCC AAATGAGAATCAACGTAAGAATATGGAGACCATGTTTGAGGACTTACAAA TTAGCTTACCTTCTAATATACCTGAATAA

Coding sequence (CDS) from alignment at sc0000233_pilon:54167..55045+

>XLOC_041780 ID=XLOC_041780|Name=XLOC_041780|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000233_pilon:54167..55045+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGAAGAAATCATTGATTTTGAGAATGCTCgtctgaaaatgaagaa
atggaGGGAAGATATTGACAGAAACAGTGAGGAGATTGTTGAATATGGAG
AATGCTTGATTGCAGAATATGCTAGCAAGCTAGGGGATGAACTCTGGGTC
TTATATGAGCAGGTGTTTGTAGCTGCGTTAGATTGCTATCGCATTGACCT
GGCAGAAGAATGCTTAGCAGCCCTTCATAAACAATTCCCTAAAAGCAAGC
GTGTATTTAAATTACAAGGGATGTACCATGAAGCAAGACAGCAATATAGT
AAAGCAGAAGCCGTTTACACCAAGATGCTCGAAGATGAGCCAGCCAATTT
AGTTGCTAAGAAGCGTTTGATTGCTATGAAGAAGGCACAAAATAAATACG
AAGAAACCATCCAGGAATTGAATGATTATTTAAAAGACTTCATGGCAGAC
CAAGAAGCATGGATGGAATTATCAGAGCTTTACATCCATCAACAAGAGTT
TGCCAAAGCAGCATTTTGTATGGAAGAGCTCATTTTGTCACATCCACACA
ACCACTTATATCACCAACGATATGCCGAAATTCATTACACCATTGGTACA
TCAGAATCCATGGAAAAAGCCAAAAAGTATTTTGCCCAAGCTTTGAAATT
AGATCCGGGAAATGCAAGAGCTTTGTATGGTCTTTACTTAGCAGCTTCTA
ATTCAGTGCAAGGGAAATCTAATACAAGCtctaaaaagaaaagtattaat
TTGTCTCAGTGGACTGCTAATAAAATAGTTGATATGTATAGTATGCAGCC
AAATGAGAATCAACGTAAGAATATGGAGACCATGTTTGAGGACTTACAAA
TTAGCTTACCTTCTAATATACCTGAATAAATGACTGAAGAAATCATTGAT
TTTGAGAATGCTCgtctgaaaatgaagaaatggaGGGAAGATATTGACAG
AAACAGTGAGGAGATTGTTGAATATGGAGAATGCTTGATTGCAGAATATG
CTAGCAAGCTAGGGGATGAACTCTGGGTCTTATATGAGCAGGTGTTTGTA
GCTGCGTTAGATTGCTATCGCATTGACCTGGCAGAAGAATGCTTAGCAGC
CCTTCATAAACAATTCCCTAAAAGCAAGCGTGTATTTAAATTACAAGGGA
TGTACCATGAAGCAAGACAGCAATATAGTAAAGCAGAAGCCGTTTACACC
AAGATGCTCGAAGATGAGCCAGCCAATTTAGTTGCTAAGAAGCGTTTGAT
TGCTATGAAGAAGGCACAAAATAAATACGAAGAAACCATCCAGGAATTGA
ATGATTATTTAAAAGACTTCATGGCAGACCAAGAAGCATGGATGGAATTA
TCAGAGCTTTACATCCATCAACAAGAGTTTGCCAAAGCAGCATTTTGTAT
GGAAGAGCTCATTTTGTCACATCCACACAACCACTTATATCACCAACGAT
ATGCCGAAATTCATTACACCATTGGTACATCAGAATCCATGGAAAAAGCC
AAAAAGTATTTTGCCCAAGCTTTGAAATTAGATCCGGGAAATGCAAGAGC
TTTGTATGGTCTTTACTTAGCAGCTTCTAATTCAGTGCAAGGGAAATCTA
ATACAAGCtctaaaaagaaaagtattaatTTGTCTCAGTGGACTGCTAAT
AAAATAGTTGATATGTATAGTATGCAGCCAAATGAGAATCAACGTAAGAA
TATGGAGACCATGTTTGAGGACTTACAAATTAGCTTACCTTCTAATATAC
CTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041780XLOC_041780-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000233_pilongenomesc0000233_pilon:54167..55045 +
Properties
Property NameValue
Aaloc1-879:1