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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000151_pilon:223595..225354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041769 ID=XLOC_041769|Name=XLOC_041769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1760bp|location=Sequence derived from alignment at sc0000151_pilon:223595..225354+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACAGTTGAAGCAGCATATGGAAGCAGATTGTCCAAAGCTGATATTGAA
CTGTCCATACCAAGATGCTGGCTGTGAATTTCAGGTATTTTAGACATAAA
GGTGTTCCTTCTTCGacaattcattttcaaaagatagtTATTATCATAAT
TTTGTTTAGTATATACTGGGATAGTATGTGAACTTTTGAACGTTGATGAT
AGACTTTTGTAATTTGCTGATTGTGTACTCGTGTACTCGTTTCATTTGCA
TCCTGGTACCCTCGTTTTGGTCAATATAAGAATCAACACTTTTCAGTTCA
ACTTTCTCCTTCTGTAGGGTTCAAAAGTTGATGTCGAAAGACATTTATTG
GATGATCAAACAGCTACAAGACACATGACACAAATGTTGGGTGCAATCAA
GCTGTTAACCAAACGAGTGAATGATCAAGAAGAGGAGTTAAAGAAGGCAT
CTAAGCTATCTTCTCATTCGACAGGCATCGAAAAAATGGATGTTGACTCT
CATTATGGGGACACTAGAGATAGTGCTTCTTCCATGAAAAGTTTATCACC
AAGAGATGTAAGTTAAGCTGTTGCTTCTGTTATGGCGATAGCATTTTAAA
CGAATGGTTTATTTGATGAAATCCTCTATTCCGTCACCAACCAATTCAAT
CCCAATCTTCGAATGTTTTGGGAAAGGGTTTTGGATATTAGTAGTacaaa
aacaagatttttttgaTTACATAAAAGATTTCGAACTCGTATCATTTTTT
AGAGTAAAGAATATACTGCTAAGATCAAGGAGTTGGAGATCAAGATCACT
CAAAGTCGAACGGTGACTGAGATGTGTCGAAGTGAACTCAAACAAAACAA
GCTGGATATGGATTCCAAAATGGACGGTCTAGCTAAACAAATACAAGAAC
AGAATAGTATGATCGCAGAAGTCAGTGCAAGAGTCTGGTGTGGATCTTTC
ACATGGAGAATaacaaatttcgaaaatttattTCAACAAGCGAAGAATCA
AGAGTTGGTAGCCATACATTCACAGCCGTTCTATACAGCAGTACCAGGTA
GGGGctccttatttttatttttattaggcattgggacttttactcgaatt
tttttttgtcacctGTTAGTTTGATTATCTTAAGAAGACATCGTAAATTC
TGACAGTTATGGATCGTTAAGTGCTCACGTTTGGTTCATGTTCTTTTCAA
ACCTTTCCAAACGAAGAAACAGAGTACACATATTGATATGGATTACTATT
Tgtatacagtcaactctctctaattcgattttcaagggacgagaaaatat
tttttctaattacagaaagattcgaattatagagacttGAATAAGAGAAA
GTTGACTGTAATAACAAGAATAATCTTCTTCAAACTCCGTTATTATTTGT
TTAGGGTACAAAATGTGTTTACGCGTAAATCTGAACGGGATCGATTCAGG
AGCTGGTACCCACGTCTCCATGTTCGTCCATTTGATGCAAGGTGAATTCG
ACTCCATTATCCAATGGCCATTCTCTGACGGTCTCGAGTTGACCATTATG
GATCAAGATACGCAAAACCCTGTCCATGTTAAGGAGGAGTTGTTCGCACG
CCCAACTCTGCAGGCGTTCTTACGCCCTAAAACACCGAGGAACCATAAAG
GTTACGGCTACGTAGAGATGATCCCGCACACTACGTTACGGGAAAGGCAT
TACGTTAGCAACGATACAATGATCGTCAAAGTAAGAGTTAAGTCTTCGTC
TTCGTCATAA Coding sequence (CDS) from alignment at sc0000151_pilon:223595..225354+ >XLOC_041769 ID=XLOC_041769|Name=XLOC_041769|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000151_pilon:223595..225354+ (Clytia hemisphaerica_ch_hm2_pilon)
TCACAGTTGAAGCAGCATATGGAAGCAGATTGTCCAAAGCTGATATTGAA
CTGTCCATACCAAGATGCTGGCTGTGAATTTCAGTCACAGTTGAAGCAGC
ATATGGAAGCAGATTGTCCAAAGCTGATATTGAACTGTCCATACCAAGAT
GCTGGCTGTGAATTTCAGGGTTCAAAAGTTGATGTCGAAAGACATTTATT
GGATGATCAAACAGCTACAAGACACATGACACAAATGTTGGGTGCAATCA
AGCTGTTAACCAAACGAGTGAATGATCAAGAAGAGGAGTTAAAGAAGGCA
TCTAAGCTATCTTCTCATTCGACAGGCATCGAAAAAATGGATGTTGACTC
TCATTATGGGGACACTAGAGATAGTGCTTCTTCCATGAAAAGTTTATCAC
CAAGAGATGGTTCAAAAGTTGATGTCGAAAGACATTTATTGGATGATCAA
ACAGCTACAAGACACATGACACAAATGTTGGGTGCAATCAAGCTGTTAAC
CAAACGAGTGAATGATCAAGAAGAGGAGTTAAAGAAGGCATCTAAGCTAT
CTTCTCATTCGACAGGCATCGAAAAAATGGATGTTGACTCTCATTATGGG
GACACTAGAGATAGTGCTTCTTCCATGAAAAGTTTATCACCAAGAGATAG
TAAAGAATATACTGCTAAGATCAAGGAGTTGGAGATCAAGATCACTCAAA
GTCGAACGGTGACTGAGATGTGTCGAAGTGAACTCAAACAAAACAAGCTG
GATATGGATTCCAAAATGGACGGTCTAGCTAAACAAATACAAGAACAGAA
TAGTATGATCGCAGAAGTCAGTGCAAGAGTCTGGTGTGGATCTTTCACAT
GGAGAATaacaaatttcgaaaatttattTCAACAAGCGAAGAATCAAGAG
TTGGTAGCCATACATTCACAGCCGTTCTATACAGCAGTACCAGAGTAAAG
AATATACTGCTAAGATCAAGGAGTTGGAGATCAAGATCACTCAAAGTCGA
ACGGTGACTGAGATGTGTCGAAGTGAACTCAAACAAAACAAGCTGGATAT
GGATTCCAAAATGGACGGTCTAGCTAAACAAATACAAGAACAGAATAGTA
TGATCGCAGAAGTCAGTGCAAGAGTCTGGTGTGGATCTTTCACATGGAGA
ATaacaaatttcgaaaatttattTCAACAAGCGAAGAATCAAGAGTTGGT
AGCCATACATTCACAGCCGTTCTATACAGCAGTACCAGGGTACAAAATGT
GTTTACGCGTAAATCTGAACGGGATCGATTCAGGAGCTGGTACCCACGTC
TCCATGTTCGTCCATTTGATGCAAGGTGAATTCGACTCCATTATCCAATG
GCCATTCTCTGACGGTCTCGAGTTGACCATTATGGATCAAGATACGCAAA
ACCCTGTCCATGTTAAGGAGGAGTTGTTCGCACGCCCAACTCTGCAGGCG
TTCTTACGCCCTAAAACACCGAGGAACCATAAAGGTTACGGCTACGTAGA
GATGATCCCGCACACTACGTTACGGGAAAGGCATTACGTTAGCAACGATA
CAATGATCGTCAAAGTAAGAGTTAAGTCTTCGTCTTCGTCATAAGGTACA
AAATGTGTTTACGCGTAAATCTGAACGGGATCGATTCAGGAGCTGGTACC
CACGTCTCCATGTTCGTCCATTTGATGCAAGGTGAATTCGACTCCATTAT
CCAATGGCCATTCTCTGACGGTCTCGAGTTGACCATTATGGATCAAGATA
CGCAAAACCCTGTCCATGTTAAGGAGGAGTTGTTCGCACGCCCAACTCTG
CAGGCGTTCTTACGCCCTAAAACACCGAGGAACCATAAAGGTTACGGCTA
CGTAGAGATGATCCCGCACACTACGTTACGGGAAAGGCATTACGTTAGCA
ACGATACAATGATCGTCAAAGTAAGAGTTAAGTCTTCGTCTTCGTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000151_pilon | genome | sc0000151_pilon:223595..225354 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1207-1560:1407 |
| Aaloc | 910-1203:753 |
| Aaloc | 670-909:318 |
| Aaloc | 586-669:1 |
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