|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000151_pilon:373227..376553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041765 ID=XLOC_041765|Name=XLOC_041765|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3327bp|location=Sequence derived from alignment at sc0000151_pilon:373227..376553+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTTCAAGAATGGTG
TAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTACAAGTACTGAAA
AAGATGATCTCAAATCAATAGTACAATCCATTGGAAATGCACGGTTTGTA
GCCATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATGAGTTTACACCA
TAGGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAACATTGTGTTGA
GTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATTATATTCGAGGG
AAATCAATACCAGAGGAGATTGATGTATGGAAAAATGGTTTAAACAAAAT
GTACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATACCTCAAGAAGA
ATAATAAAGATTATGGTAATTCTTTAGAGTATTATGGTGTAGATATTGGA
GGATTTTATCAAGACTGGGTCACTCCtttcaatataattttcaaatacaT
CAAGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTCAAAATTATTGC
CATATCTCAACCAAATGTCCACAAATGCACGAAAAAACTAtgctgaaaat
tttgatttgcaCCAAAAAGCTTTACTATCTGCTATATTGGACGAAGCTGT
AAGTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAGAAGCAGTAAAG
AAGATTATGAAAAGATTCGACAGTCATTGACTTCAATGCAGTTGGCAGAA
AACTATTATCGAAATTATGATACTGTTTCTAAGAAGTATGTAGGTTTGAA
TGGAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGTCTTAAACAAAA
GAAGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTCATACCAAAACA
AAAAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACACCAGCAGGTCA
ACTAATAAAGCAAGCTTTAGGAAAGGTACAGTTTGCATATTGTCTTTGTg
tcttttttgtcaaatttaagtGTTGTTTGGTGTTTCAGTATCTAACATTC
CCATTAACTGTTCCAACCttaattattttgaataattgcTACCTTTTATG
TAGCAAACCAGAGCAAACTGTAAAGCAAAAAGCAAattgttttcttaaaa
ttgtaTCGCTCTTGAAGCATCGCTTAACCTTCAATACATATCTTTTATGT
TATGTGAATATATCTGTGAATTAGCAAATGATTTTATATGCTCCTCTCTC
CTGCAGGATTACTACGGTATTGGTATGGTGTATGGATCTGGCCAATTTTG
GAATAAATGGCAACGTCCTGCTGAAAGGTTCATTGACAAAATCCCTGAAT
GGGATGAAAAAAGGGTCAGTTTTGAGAGTGAAATTACTAAATCCCTACCT
GGAAACGGGaactatttcattgatttttctgcAGCACCAAAGAATTTTAA
ACTGCAATATTTTATGTCAACACCGTTATCTCTACGGGAAAACGATTATT
ATATGCAAATCGAACCGCAGGAATGGGATGGTTGCATCTATCTTCAAATT
GCATCGCCTGCAACCCCAATTTAGTGACTAACAAATGAGTCTTCTTGAAG
TAAACCACAatttttcatattataaattttttgtatcatatttgcttttt
actctttgcaacatttattatcatatttctcaaaatgtCTTAGGTATTTA
TTggctgatttcaaaatttatttgtccaggggggggggggtcatgcagtt
actaTGTGAACACTATGACACTTAGTACGTGGTGGTGTAACAactaaaag
aatttaaaacagttacTCCAAAGTGGAGTAAATGcagattttttcacttt
tttgaaaaatttccctaaatttccggcaaaaatttgaaattttcgaagaa
aaattgaattgtttttggaaaaatatctgaaatttttcatgaaaataagt
tttttgtcatatttatgaAAATAGAAATCGTGGAATGCTTTGATAGTGAC
TTTAACCAAGTACATAAACTTATTCCAAcaatttttaaatacaaaaatca
aattttcgacCAGTAGGTATGTCTTATATATCTAAAAAATCCGCAAATTA
CCCATTTTATGGGGTGGTGTACCCCTTAACTAAATTAACtaaaataatat
tatttttctttcttttcagaaacaaaaagaaaatagaatgaATGACCCAG
CACCAGTGATATATGGTCTTGAATTTCAAGCTCGTTCGTTATGCCCTCAA
TTTGGCGAAACCGAAGCAATACGGTTTTTAGTTGGTACCCAATCATTACG
TAATGATAACCAAGTccatttgattgattttgaagACGAAAGTAACCTAG
TCACAAAGCATGTTTTTTCGCACACGCCTGGTGAAATATGGAATATAGCA
TCGAATCCTTCAGATAAGAATATATTAGCCACGTGTTATAGTAAGATTAT
AGATGGTAAAACGAAACGTTTTGCAGCAATGTGGAGGATTCCACCCTTAG
ATGAGACAGCACCTCCTGTTTATGAGTTAACACCTGGTGATAATAACGGT
AAATGCGTTTCGTTACAGCATGTATGTGAGTTGGATGCAGGGCATGGTGA
TGTCAAGAAAGTCATGTGGAACCCATCCAGTGATAACGACAAGCTATTAA
CCATCTCTGAAAGACATATTGATTTATGGCAAACTTCAAATACGGGTGCT
GATCATGTTGATACTATAACCTTAGAAGGAAAAGCACAATTACAATACAG
TGTCGGTAGATTCAATCCACACCATGGTGGTTCGCAAATTGCCACCGGTA
TTGACTGTCACATTAAAGGATATGATTTGAGGAGCatgtcatcttcattt
tctatagAGAATGCTCATTCACAATTAGTTCGTGACTTAGATATGAATCC
GAACAAACAATACTATCTAGCTAGTTGTTCGGATGATTGTAAAGTCAAAT
TTTGGGATATTCGGAACACGAAAGAATGCCTAATGACGCGTTCAGATCAC
TCACATTGGGTATGGAGTATCAGATATAATAATTTTCATGATCAATTGAT
TTTGACGTCGAGTAGTGACAGTCGTGTCATTTTATCCAATATTGCATCCT
TATCTTCGGAGCCTTTCGGTCACCTTGACGACGAAGATGAGGAGGAAGAA
AAACCAAGAGAACCAATTCCTGATAGATTGATATCGACTTTCGAGGAACA
CGAAGACTCGGTGTATGCTGTGGAATGGTCAAGTGTTGATCCATGGATCT
TTGCTTCTCTTTCATATGATGGACGTTTGGTCATCAATCGAGTTCCAAGA
GTTGAGAAATATAAGAttcttttatag Coding sequence (CDS) from alignment at sc0000151_pilon:373227..376553+ >XLOC_041765 ID=XLOC_041765|Name=XLOC_041765|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4482bp|location=Sequence derived from alignment at sc0000151_pilon:373227..376553+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGTCTGAACAGTTATTTCAAGAAGCATCTACAGCTTTTCAAGAATGGTG
TAAAAGAAATAGTGTTCCAGTTCTCTCGTTGGATCCTACAAGTACTGAAA
AAGATGATCTCAAATCAATAGTACAATCCATTGGAAATGCACGGTTTGTA
GCCATCAGTGAAGGGTTTCATAATTGTAAGGAGATGATGAGTTTACACCA
TAGGATCATTCGCCACCTGGTTGAAGAATGTGGATTCAACATTGTGTTGA
GTGAAAGTGGGTTCCCCGAGTCCCTTTATATCAATGATTATATTCGAGGG
AAATCAATACCAGAGGAGATTGATGTATGGAAAAATGGTTTAAACAAAAT
GTACAGTGCCTGGAGAGAGGGACAAGCTCTGATTGAATACCTCAAGAAGA
ATAATAAAGATTATGGTAATTCTTTAGAGTATTATGGTGTAGATATTGGA
GGATTTTATCAAGACTGGGTCACTCCtttcaatataattttcaaatacaT
CAAGACTGTTGATGAAGACTATTGTAAAGATCTAGAGTCAAAATTATTGC
CATATCTCAACCAAATGTCCACAAATGCACGAAAAAACTAtgctgaaaat
tttgatttgcaCCAAAAAGCTTTACTATCTGCTATATTGGACGAAGCTGT
AAGTTACTTTGGCTCCAAAGCTGATGAGTATGTATCCAGAAGCAGTAAAG
AAGATTATGAAAAGATTCGACAGTCATTGACTTCAATGCAGTTGGCAGAA
AACTATTATCGAAATTATGATACTGTTTCTAAGAAGTATGTAGGTTTGAA
TGGAAGAGAGATTGCAATGGCCCAGAATTGCTTGTGGGTCTTAAACAAAA
GAAGTGATGCCAAAGTTGTTTGGATAGATCACGTGATTCATACCAAAACA
AAAAGCCAACTTCAGGATGGTGTATGGGGAAACTTCACACCAGCAGGTCA
ACTAATAAAGCAAGCTTTAGGAAAGaTGTCTGAACAGTTATTTCAAGAAG
CATCTACAGCTTTTCAAGAATGGTGTAAAAGAAATAGTGTTCCAGTTCTC
TCGTTGGATCCTACAAGTACTGAAAAAGATGATCTCAAATCAATAGTACA
ATCCATTGGAAATGCACGGTTTGTAGCCATCAGTGAAGGGTTTCATAATT
GTAAGGAGATGATGAGTTTACACCATAGGATCATTCGCCACCTGGTTGAA
GAATGTGGATTCAACATTGTGTTGAGTGAAAGTGGGTTCCCCGAGTCCCT
TTATATCAATGATTATATTCGAGGGAAATCAATACCAGAGGAGATTGATG
TATGGAAAAATGGTTTAAACAAAATGTACAGTGCCTGGAGAGAGGGACAA
GCTCTGATTGAATACCTCAAGAAGAATAATAAAGATTATGGTAATTCTTT
AGAGTATTATGGTGTAGATATTGGAGGATTTTATCAAGACTGGGTCACTC
CtttcaatataattttcaaatacaTCAAGACTGTTGATGAAGACTATTGT
AAAGATCTAGAGTCAAAATTATTGCCATATCTCAACCAAATGTCCACAAA
TGCACGAAAAAACTAtgctgaaaattttgatttgcaCCAAAAAGCTTTAC
TATCTGCTATATTGGACGAAGCTGTAAGTTACTTTGGCTCCAAAGCTGAT
GAGTATGTATCCAGAAGCAGTAAAGAAGATTATGAAAAGATTCGACAGTC
ATTGACTTCAATGCAGTTGGCAGAAAACTATTATCGAAATTATGATACTG
TTTCTAAGAAGTATGTAGGTTTGAATGGAAGAGAGATTGCAATGGCCCAG
AATTGCTTGTGGGTCTTAAACAAAAGAAGTGATGCCAAAGTTGTTTGGAT
AGATCACGTGATTCATACCAAAACAAAAAGCCAACTTCAGGATGGTGTAT
GGGGAAACTTCACACCAGCAGGTCAACTAATAAAGCAAGCTTTAGGAAAG
GATTACTACGGTATTGGTATGGTGTATGGATCTGGCCAATTTTGGAATAA
ATGGCAACGTCCTGCTGAAAGGTTCATTGACAAAATCCCTGAATGGGATG
AAAAAAGGGATTACTACGGTATTGGTATGGTGTATGGATCTGGCCAATTT
TGGAATAAATGGCAACGTCCTGCTGAAAGGTTCATTGACAAAATCCCTGA
ATGGGATGAAAAAAGGaaacaaaaagaaaatagaatgaATGACCCAGCAC
CAGTGATATATGGTCTTGAATTTCAAGCTCGTTCGTTATGCCCTCAATTT
GGCGAAACCGAAGCAATACGGTTTTTAGTTGGTACCCAATCATTACGTAA
TGATAACCAAGTccatttgattgattttgaagACGAAAGTAACCTAGTCA
CAAAGCATGTTTTTTCGCACACGCCTGGTGAAATATGGAATATAGCATCG
AATCCTTCAGATAAGAATATATTAGCCACGTGTTATAGTAAGATTATAGA
TGGTAAAACGAAACGTTTTGCAGCAATGTGGAGGATTCCACCCTTAGATG
AGACAGCACCTCCTGTTTATGAGTTAACACCTGGTGATAATAACGGTAAA
TGCGTTTCGTTACAGCATGTATGTGAGTTGGATGCAGGGCATGGTGATGT
CAAGAAAGTCATGTGGAACCCATCCAGTGATAACGACAAGCTATTAACCA
TCTCTGAAAGACATATTGATTTATGGCAAACTTCAAATACGGGTGCTGAT
CATGTTGATACTATAACCTTAGAAGGAAAAGCACAATTACAATACAGTGT
CGGTAGATTCAATCCACACCATGGTGGTTCGCAAATTGCCACCGGTATTG
ACTGTCACATTAAAGGATATGATTTGAGGAGCatgtcatcttcattttct
atagAGAATGCTCATTCACAATTAGTTCGTGACTTAGATATGAATCCGAA
CAAACAATACTATCTAGCTAGTTGTTCGGATGATTGTAAAGTCAAATTTT
GGGATATTCGGAACACGAAAGAATGCCTAATGACGCGTTCAGATCACTCA
CATTGGGTATGGAGTATCAGATATAATAATTTTCATGATCAATTGATTTT
GACGTCGAGTAGTGACAGTCGTGTCATTTTATCCAATATTGCATCCTTAT
CTTCGGAGCCTTTCGGTCACCTTGACGACGAAGATGAGGAGGAAGAAAAA
CCAAGAGAACCAATTCCTGATAGATTGATATCGACTTTCGAGGAACACGA
AGACTCGGTGTATGCTGTGGAATGGTCAAGTGTTGATCCATGGATCTTTG
CTTCTCTTTCATATGATGGACGTTTGGTCATCAATCGAGTTCCAAGAGTT
GAGAAATATAAGAttcttttatagaaacaaaaagaaaatagaatgaATGA
CCCAGCACCAGTGATATATGGTCTTGAATTTCAAGCTCGTTCGTTATGCC
CTCAATTTGGCGAAACCGAAGCAATACGGTTTTTAGTTGGTACCCAATCA
TTACGTAATGATAACCAAGTccatttgattgattttgaagACGAAAGTAA
CCTAGTCACAAAGCATGTTTTTTCGCACACGCCTGGTGAAATATGGAATA
TAGCATCGAATCCTTCAGATAAGAATATATTAGCCACGTGTTATAGTAAG
ATTATAGATGGTAAAACGAAACGTTTTGCAGCAATGTGGAGGATTCCACC
CTTAGATGAGACAGCACCTCCTGTTTATGAGTTAACACCTGGTGATAATA
ACGGTAAATGCGTTTCGTTACAGCATGTATGTGAGTTGGATGCAGGGCAT
GGTGATGTCAAGAAAGTCATGTGGAACCCATCCAGTGATAACGACAAGCT
ATTAACCATCTCTGAAAGACATATTGATTTATGGCAAACTTCAAATACGG
GTGCTGATCATGTTGATACTATAACCTTAGAAGGAAAAGCACAATTACAA
TACAGTGTCGGTAGATTCAATCCACACCATGGTGGTTCGCAAATTGCCAC
CGGTATTGACTGTCACATTAAAGGATATGATTTGAGGAGCatgtcatctt
cattttctatagAGAATGCTCATTCACAATTAGTTCGTGACTTAGATATG
AATCCGAACAAACAATACTATCTAGCTAGTTGTTCGGATGATTGTAAAGT
CAAATTTTGGGATATTCGGAACACGAAAGAATGCCTAATGACGCGTTCAG
ATCACTCACATTGGGTATGGAGTATCAGATATAATAATTTTCATGATCAA
TTGATTTTGACGTCGAGTAGTGACAGTCGTGTCATTTTATCCAATATTGC
ATCCTTATCTTCGGAGCCTTTCGGTCACCTTGACGACGAAGATGAGGAGG
AAGAAAAACCAAGAGAACCAATTCCTGATAGATTGATATCGACTTTCGAG
GAACACGAAGACTCGGTGTATGCTGTGGAATGGTCAAGTGTTGATCCATG
GATCTTTGCTTCTCTTTCATATGATGGACGTTTGGTCATCAATCGAGTTC
CAAGAGTTGAGAAATATAAGAttcttttatag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000151_pilon | genome | sc0000151_pilon:373227..376553 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1084-2241:2170 |
| Aaloc | 976-1083:1257 |
| Aaloc | 1-975:1 |
|
