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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:186328..190729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041762 ID=XLOC_041762|Name=XLOC_041762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4402bp|location=Sequence derived from alignment at sc0000233_pilon:186328..190729- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAA
GATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTA
AAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAG
ACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGAC
CTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTT
ATCACTTAGGAATGAGACCAGTAAGTATATTTGTGATATGCAGCATTGCA
ATATCTTCCACGGACCCAACAGCTGATTGGTTCGTGCAAGTGACGTATTG
ACTGATTTTACGTCATTTACAACAAATCAGCTGCTGGGTCATGTAGACAT
TGCAATGGCGCATATCATGAATTTGTGCATTTATTTTGTATTTTTCGCTT
TATTTGATTATGTTTGAAAAGTGTTTTTATGCTTATTAAAATGTTTTGTA
ACTATTATTTTAGCTCTTTTTAAAGATTTTATTTTTACATAAGTGTTCCC
GTTTCATATCAGAAACATAAGGACAGTGTGTCTGGCCTTTTGTTATATTG
TGCTGATATAAACAAAAAATGTTTTTCTTGCCCTCTTTTTGATCAATCTT
GATTCACATCCGTGTCAATCCAATGTGAAAAAGCAAACGATATCACTCTT
ATTTAAAATAAAACCTTTCAATTTCAATTAAAATCGTCAATCTTAGAAAC
TGAAATGTAATGTTGCTTGGGCGGTGATGATTGTTGCTCCCATGAACGTA
CTTGTGAGAGCATTTCGCTAGCCCACGCTTGTTCGAGTAATGTTGCCGTT
ACGCCACGGCTCACATGGTATCCTTGTAATGTACCGTGTCTGACCTGAAA
TATATTTCATTTATAATATGACAGTCTCTTTTTAACGTAAATTGCGAATT
AATTCTTTAGAAATAATAATAATGGGCTTTTCCAGAAAATATTAGAATTT
GGAAGGGGCGTGGAGTAACTTAAACCGCCGGACAAGGCAAATTTTGTAGA
TTTTTCACTACCCCCTGGACACTATAGCCTCCCCCCTCGTGTACGAACAT
TTTTTGGAAGAGCCTAATATAATAATGAAACACAAAACTCGAGATCTATC
ATTTTGATGCAGCAGGACAATAATCCGAAAATATTTCTGTGAATATCGTT
TGTTGAACAACGCAAAAAAGATCGTCTGATTTAAAAGGCCAACTCATTTA
TTTTATCTATCCCTACAATTCTCTAGGGTGAGGATGTATTGAATAAAGCA
GGAAGGTTACACAAATTCATGGACTGGGACAGGGGAATGCTCACGGTACG
TTTTCATATTGAATTGTTTAAATATTTGTAGCATTTCAGATCTTAATAAT
TTTCTACTTTATCCTCAATGTGTATGCTTTGACAACCTTTGATGTTTCTT
GAGATAATAAGCCTTTTTATACGTTTCCATCCATATTGACATTGAATGAA
TTAATGAAAGCCTTCTCTTTCTACTGAAATATAAATTGTTGCTTTTAACC
TATTGTAAATAACCTGACTTCCTTCTCTTAGGACAGTGGAGGATTTCAAA
TGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGTTTGCTACTAATTT
GTTAAACCATATGAAAGCCTTGGAAACTATTGTTAAAGATTATTACACGA
AACCTTTTTATTTGTTAATCTTTGGCAACTATTGCTAAAGGTCACTGCAC
GAAGCCTAATTTTATTTGTTAGAAAATATCTTTGTCCGAATCGGTCAAAA
GGATTTCTTCATTTTTGTGTACTCTTTGAATCGTCCATAAATACCTAGTA
TCTATGCATGCCTTACTGATCCCAATCTTTCCAAACTGCAATACAATATA
TCCATTCATTTGCCGCAAATAATGTTTTTTATTGGCCTATTTTTTACTTA
TTTGCCTTTCACCTTTCAGGAAGGTGTACGTTTTAGTTCGCCTTACGATG
GTCGAGATATTCTTCTTACACCAGAAAAATCTATGCAGATACAGAATGCT
ATTGGAGCTGATATCATGATGCAATTAGATGACGTAGTCGATGTCAAAGT
TACGGGACCGAGAGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCTCG
ATCGGTGCATTGAAGGTCATCAACGGAAAGAACATCAGAATTTATTCCCT
ATCATTCAAGGTGGATTGAATTTGGAACTGAGGACAAAATGTATCGAAGG
TACTTGTTATTCTTGAAAAAATTTCTTGCTGGGCCAGATAAATTTGATAA
AAAAGTGAAAACTAAAAATTTAATTTTATTCATTGTTTGAAGTTTCGGTG
TCTTCTTTGCACCATGATCATAAGTATAGTAAATACTTGTTATTCGTTAG
GAAAAGGAGCCAAGTGGGATGAGTAATAAGCAAAAACCCTTTGTGCGCGC
TGTTTTTTTTAAAAAAGTTGAAATTTTTCTAATTTTTTTTTTTAAAACTC
AAAACATTAAAGTGCCATAAAAGCTTGTAGCTTTTGATTTAGAAGATGGT
TTTGTTACATTGATAAGCTATTTTTATACTCCTTCTAAAAGCATTCGGCT
TATGCCCCTTTAAATCAAGTTGATATTGATTAGCCTCGAGCTAACTAAGT
ACACATTGTACTACTTTGCATCAACTTTAAAGAAAAGAAACATAAACATA
AACATAAACACCTTTTAAAAAATGCAGGGACGTTTCTACCATGGTTATCC
TTATAACTTAGCATTTTTACGTTTTGAATTATAGCCATGGTCAAACGCAA
CATGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGATG
ACTTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAAA
CCTATCTATGTTATGGGAGTTGGGTGAGTAAAAGTTTTCATTTCGAGATC
TCATTTTTTAATTATATTTCACCTCGTCTACTGTTCCACTGTTCTCATTT
ATTAAATTCCCGTAAACACTCAAAATATGATATATCGAAAAGTGTCAACG
ATAAGGCTTTGCAACAGATTGAAGTCTCGCTAATGGTTTGTTCTCGCAAC
TTCAGTTAAGCTAGTGCGAATGTCTGTCTGTCAGTCTGTCCAAAAAATCT
GGGACGAAAAATATTGTTTAGCCTGCCAGTGCGGTGCCCTTGTCCCTGTT
GTCAATTTATAAAGTAAAGGTAAAGGTTTTGAAATTTATTTTTGTTTAGG
TATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATATGTTTGA
TTGTGTCTACCCCACGCGTACTGCAGTAAGAAATAGTTTATCAAATATTT
TTTCATATTATTTCTCCGTTAAAAACTTCATCCGTTGTGCTTTTCAAAGG
TTAAAGAAAGTCTTTCGAAAGATGGCACTCAAATTTTCAATTTTGTCTAA
ATCCAAAGATTGACCAATTTTTCTTGACTGATCGGTTGATACTTCTAGAC
TCCTGAATGCCTGATAATCTTGAAATCCTCATATAAAAGCTTTTCAATAA
ACGCCCAATGTTAACAAATACATTCAATCGAACGAAACTTAAACATTTTT
AAATGTAATTTTTTGATTAAAATTTCTTTTCAGAGGTTCGGTACAGCATT
GGTGCCATCTGGTCAGCTGCATCTCAAAACAAACCAATATGCTGACGATT
TCAGGCCCATTGACGACCAATGTACTTGTTTAACGTGTCGCAAATATACA
AGAGCTTTTATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCT
TTTATCCATCCATAATATCAAGTATCAGGTCAGGATTTTCAATATAAATT
ATCCAGTTTGATGGTTTTATTTATTGAATAATTCCACCCATAAGTCCACA
CAACAATCAAATCAATCTGATTGGTTGAATCTGAAAAGTATGATGTAATT
GAGTCAAATAAACCAATCAGTTGAGCGGACTGTGGGATAGTTAGCCGTAA
GTACGGTGATGATGCCAGTGAGTGGTCTTTTCAAATGTTACTTTGAACGA
AGAAATTTCCTTTTCTTGTGCTATGACCAAATTTTATCACTAAAAAGATG
AGACTTCAGTGCTTGCTTTCGAGTGTTCAACTCTGTTTTAGATAAACCAA
TTAGCGGGGACTCGATATCTGACAGCTAAGGTGACGTTTTTAAACAGCTT
GGAGCTTGGATCATCACTCACTATTTTATTCCCACAATTTTGCTTTCAGA
TGAACCTTATGACCACGTTACGTCAAAGTATAATCGACGATCGATTGGAA
GATTATATACAACAATTCTTCTTGAAAATGTTCCCTAATAAAGACTATCC
TTCGTGGTGCATAAACGCTCTTGATGCTGTCAATATACAACTTGTCACGT
GA Coding sequence (CDS) from alignment at sc0000233_pilon:186328..190729- >XLOC_041762 ID=XLOC_041762|Name=XLOC_041762|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000233_pilon:186328..190729- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAAGTCAATTTCAGATATAATAAATCAACATTCCAAGTAAATAAAAA
GATGACATTAGATTGGCCATTGCATTATGAAGTTGTTGCCAAATGCTCTA
AAAGTAAAGGACGAGCCTCACTGATGAGGCTACCTCATTTTACAGTTGAG
ACACCTATCTTTATGCCTGTTGGTACCCAAGGTACAATGAAAGGGTTGAC
CTGTGATCAGTTACGTGAACTTAATTGTCAAATCATCCTGGCCAATACTT
ATCACTTAGGAATGAGACCATTAGAAGTCAATTTCAGATATAATAAATCA
ACATTCCAAGTAAATAAAAAGATGACATTAGATTGGCCATTGCATTATGA
AGTTGTTGCCAAATGCTCTAAAAGTAAAGGACGAGCCTCACTGATGAGGC
TACCTCATTTTACAGTTGAGACACCTATCTTTATGCCTGTTGGTACCCAA
GGTACAATGAAAGGGTTGACCTGTGATCAGTTACGTGAACTTAATTGTCA
AATCATCCTGGCCAATACTTATCACTTAGGAATGAGACCAGGTGAGGATG
TATTGAATAAAGCAGGAAGGTTACACAAATTCATGGACTGGGACAGGGGA
ATGCTCACGGGTGAGGATGTATTGAATAAAGCAGGAAGGTTACACAAATT
CATGGACTGGGACAGGGGAATGCTCACGGACAGTGGAGGATTTCAAATGG
TTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGACAGTGGAGGATTTCAA
ATGGTTTCTCTCATCTCTCTGTCAGAAGTCACTGAGGAAGGTGTACGTTT
TAGTTCGCCTTACGATGGTCGAGATATTCTTCTTACACCAGAAAAATCTA
TGCAGATACAGAATGCTATTGGAGCTGATATCATGATGCAATTAGATGAC
GTAGTCGATGTCAAAGTTACGGGACCGAGAGTAGAAGAAGCAATGCATCG
CTCCATTCGATGGCTCGATCGGTGCATTGAAGGTCATCAACGGAAAGAAC
ATCAGAATTTATTCCCTATCATTCAAGGTGGATTGAATTTGGAACTGAGG
ACAAAATGTATCGAAGGAAGGTGTACGTTTTAGTTCGCCTTACGATGGTC
GAGATATTCTTCTTACACCAGAAAAATCTATGCAGATACAGAATGCTATT
GGAGCTGATATCATGATGCAATTAGATGACGTAGTCGATGTCAAAGTTAC
GGGACCGAGAGTAGAAGAAGCAATGCATCGCTCCATTCGATGGCTCGATC
GGTGCATTGAAGGTCATCAACGGAAAGAACATCAGAATTTATTCCCTATC
ATTCAAGGTGGATTGAATTTGGAACTGAGGACAAAATGTATCGAAGCCAT
GGTCAAACGCAACATGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTG
AGGCCAAGGATGACTTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTA
CCGAGAGATAAACCTATCTATGTTATGGGAGTTGGCCATGGTCAAACGCA
ACATGCCAGGTTACGCAGTTGGTGGTTTGAGCGGTGGTGAGGCCAAGGAT
GACTTTTGGAAAGTCGTTCATCATTGCACTAATCTTTTACCGAGAGATAA
ACCTATCTATGTTATGGGAGTTGGGTATGCGATAGATTTGGTTGTATGTT
CTGCGTTAGGAGCTGATATGTTTGATTGTGTCTACCCCACGCGTACTGCA
GTATGCGATAGATTTGGTTGTATGTTCTGCGTTAGGAGCTGATATGTTTG
ATTGTGTCTACCCCACGCGTACTGCAAGGTTCGGTACAGCATTGGTGCCA
TCTGGTCAGCTGCATCTCAAAACAAACCAATATGCTGACGATTTCAGGCC
CATTGACGACCAATGTACTTGTTTAACGTGTCGCAAATATACAAGAGCTT
TTATCCATAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCTTTTATCC
ATCCATAATATCAAGTATCAGAGGTTCGGTACAGCATTGGTGCCATCTGG
TCAGCTGCATCTCAAAACAAACCAATATGCTGACGATTTCAGGCCCATTG
ACGACCAATGTACTTGTTTAACGTGTCGCAAATATACAAGAGCTTTTATC
CATAGTTTGGTTGGCAAGGAATCAGTTGCTTGTTACCTTTTATCCATCCA
TAATATCAAGTATCAGATGAACCTTATGACCACGTTACGTCAAAGTATAA
TCGACGATCGATTGGAAGATTATATACAACAATTCTTCTTGAAAATGTTC
CCTAATAAAGACTATCCTTCGTGGTGCATAAACGCTCTTGATGCTGTCAA
TATACAACTTGTCACGTGAATGAACCTTATGACCACGTTACGTCAAAGTA
TAATCGACGATCGATTGGAAGATTATATACAACAATTCTTCTTGAAAATG
TTCCCTAATAAAGACTATCCTTCGTGGTGCATAAACGCTCTTGATGCTGT
CAATATACAACTTGTCACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:186328..190729 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1084-1236:154 |
| Aaloc | 889-1083:770 |
| Aaloc | 814-888:1153 |
| Aaloc | 676-810:1617 |
| Aaloc | 394-672:2434 |
| Aaloc | 340-393:2822 |
| Aaloc | 271-339:3127 |
| Aaloc | 1-270:4403 |
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