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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:156672..161145- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041761 ID=XLOC_041761|Name=XLOC_041761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4474bp|location=Sequence derived from alignment at sc0000233_pilon:156672..161145- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTATATCAATGTCTAGGCTTATTTATGCTCCTTTGTCAACTCTT
CCAGTTTACAGCTGCGCAGGAATTATGTAAGTAACTTTTTCTACATTTAT
ATAAGCATTATATCTAGGTTCAGATATGGCAAAAATTTGAATGCGTAGTT
AACCCAGGGGCGGGGGTACTTGTGACTAAAACACTCTCAAAGGGTCTCGA
AAATGACAATTAAATCAAAAGGTACAATTTTTGATTTTTTGCATGCTCGA
ACGTGCATCTCACTTCGCAAACCTAGTACACCCCCCCGCGATATTGAACT
AATTAATGAAAATGTTATGCTGGTGGAGGTATTGGCCAGCCTGGACTTAA
GAGCCTGTAGTAGATGGATACAGTATTTCTATTGCTACACGAACAATAAA
TAGAAACAAGTAGTATATTCTTAAAATTTGAAATTCTAATTCTTTTTTTA
GCATGCACAGACAAGCTTCCTAATTGTTCGGTTTTATCTCCCATGCAATG
TAGATCCACATCGGGTCAAACTAAATGTCCTATAAGTTGTGCAAATCCGA
AATGTTTCACAACCACCACAACAACAACCACCACAACAACAACAGCCGTC
CCTCCTACAATTTCTTCATCAGGTACTTTTGATTATCTAATCGTCCAGAA
GGAGCACTGTTACTTCGCGATACTAGGACCGAAATAAACATCTCAAACAC
CTTTGTAAACCCTACACTAAGCTCCGCCTATGATCGACGAGATATCATTG
AAGAAGAAACTATTGAAGCGTTAAAAATTTGCCTAACGTCCAACGGGTCT
ACATTGGGGTACATTGCACTTTTTCAAAAAAAAGTGTTGCTAGATCTTTA
CCCAGCTGGCACATATCTTATATAAAAGACTTCTTATATAAAAAAACTTT
TTCTATAAGAAACTCTTTTTTTTCACTATAGGATGAGCAAAAGCCTAGGA
CCCAGCTCAAATCCTAGCCTCATCTAATATTCCGCTAAGCTGATAAATAA
GATACCATATCATATAAGATATGTTGGATTGAAACAGGATTTTTATCTAT
TTAGAACTTAACAGCACTGTCTCAGTGAGATGTGATGACGAAAAGATGAC
CATTGTTATTCCCAAAAGTGAAATCCCGAACCTAGAAGGCGATATTTCTC
AATACAATATTTCATGGAATGATTTTACTTGTGGACCAAGTGAAAAATCC
AATAAAACACATGTGATTATGGTGGCTGGTTATTCGTCTTGTGGCACTAA
AGCTGTGGATGATGGGGAAAACATCGTTTTTCGAAATAAGGTACCTAATC
ATATACTTTAATGGGATAAACTTTCGCGGGGATTTTTTTTGGGACACTTA
AAACTTGAACGACTTTTAAAAAATAAATTTTCCAAAAACTTTTGCTTTTA
GGTTTCTATCAGCAAAAATGCAACACATATTACTGAAAAACCTCATCTCG
AGACAGCTAGTAGCTATGTTAGTATTGCAGAGTGCAGAGTTCAGAAGCTA
GTTAATGTTTCGCAAGAAGATGGGCTCAATGTTACAATGCCTGATTCGGT
GGTTGCAAAAACAAGTAAGAAGACTGACTTATATTAACCTTTACTCGACT
TTTTTTCGTGACTTTTTTTACATGAATCTGCCAATAAGAACGTGTATTCC
CGTCCGAAAGTTCAAAATCTGGGGTAACCTGTTTCAATTTTCCTAAAAAG
GCTCAGAAATCTAATTGATTGTATTGACCTCTAGCCATTAAAATTTTTAA
ATCAAATTTAATAAAATATAAAGATCTCTCGTATATATTCCATATATCAG
ATGCATGTAGCCTACTAGCTCCTATCTTGCACCTAATAAGTCCAGCAGGG
ATGTAAATTTTCGGGATATCTTTCAGGTTCGACTGACGATTTCACCGTGT
CGATGAATCTCTACAAATCAGAAGATTTCAACAAAATGTTCAGCTATCCT
GCTGTTATCGATATTACTGACCGATTCAATTTGGAAATCGAACTGGTAAC
TAGTTCCAGTCTTTTTATCATACCTCAAAATTGTCACGCAACGCCTGACT
CAAATCGAGATAATGCTCTCAAAGAAGACATCGTCACAGACAGGTATTTA
ATGAAACAGTAGAGGTTTGGGGACAAAAGAAGTTTTTTCGCGTTGGTGCA
ATGCAGATGCTCCATCCGACCAACCTAAAACGCTTTCTCGTGTCTCCACC
CCATTTTTCTTTCTACCAATAAAAGTGAAATCTGACTTTTGTCCCCTCAC
TTTTTGTCCCATGAAACAAAAAAAGAAACCATGAGACACACACTTTTTTT
CTTGTGTTGGTGGGATAGAGAAAGTTGCATTGCACCAACGCGAAAAAAAG
TTCTCTTGTCCCCAGGCTTTAAATACAAAGAAATTCCACAAATATGATGA
TTATGAACTTTTGATTTGAAGAATCCCTCTCAAATAAACTGTCAAGTGAC
TCGAAATGATTAGGTGTAAGCTGCTAACCCTCCCTCCAACTTCAATTTGC
TATTACGATTTTAATAGTTCAATTCTAAAAATGCATGCTTCATTTTTGTT
TTGAGAGCAGCCTAGTAGTCTAAAGTCTGCACACAGACCTGATATCTACG
GCTAATTTCAAAATTCATTGCGGTAGAGGGTCTGTTGTCATTGTCTTTTT
CTGATTTGAGATTTTTCAAACCGACCGCTACGATAAAATGCAGCGGGTGA
CAGAGGGCCGACGACGAGAGAACTGTTGCTATTTCTAAATCATACTTTTT
ACGCAGAGGTTTCCGTACGGCAATTTTTTTACTAAACAGAGAATGCGCCA
AGAGTGTACTACGAAATGATAAACGTGAAATTCTTTAAACGGGATCCAGC
GCCAGTTCGGCGCGATTTCCATGGACAGAAAGGGGTAAGGAGTAGAGATT
ACAATCGGGAACCCTTTGTTTCAGCTAATGACCCATGTTCATACGTTAAA
GTTTCTCATCACTTGAGATTTGGTTACGGCAAAGAAATGTTCATGTTCGT
TGCGAAATGTTTTGGTGCAGTTTCGTTCCGATGAATAAAGTGGAACGTAA
CTGATTCGATACCTTTTTCTTTTTAAGGCCGGTCTCCACTTTCGCTCCAC
TTTTTCCGTTACGTCAATTTCAACCAATGGAATTGCTTCATTTTTCAACC
GCGACCAACGACCTTACAAAAACGTCAAAAAGTATTCGCTCATGTCGCGC
AAAGTGGAGACCGGCCTTTAAAGTCTCCTTTTTTGACGTTTCAAATTTTT
GGTGTGCACGCAGGCTTTCAGAACGTTTCATTTCGAAACGATGTGGAACA
TCAACGTCTGAACATTACAATGTCTTAGATGATTTAGCCACCATCATATC
TACTTCTCGATCACATACATCATACACGTTTTTTTTTGTTTTTTTTTTAA
GAAAATAGTTTTACCAAGCAGCCTCAATGATTCTTAAGAAATCGGCCTTT
TGAGCCTTAGATGTTTCTTACATGTTTCTAAACCTTTTGACATAATCAGT
CTGGTTTTCATGCAAAGAAAAAAAACATTTGTTTTGATTATGATTCTGAG
CCACATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAACAAAAAGGTGTAAT
TGATTTAAAACTTATCAACTCTTCTCAATTTCTTAGATGTCCAACACCTG
GTCACGATTTCCAAGAAGAAACACCAGCTGGCAATGGCAACAAATTCCGA
TTCTCTTTGAATACGTTTAGATTCAAAAACACGAACGGTATGGTCTACAT
TCATTGCACAGCTCACGTATGCATGAAAAACAGCACAGATCCAAAATGTC
GATTCGGTTGTGTCGATAATCAAAGAAGAAGAAGGAGATCAGAAGATCAG
ACAAGACTTTTTGGTGATTTGACCAAAGATTATGACATTCGAACTGGATT
GATTGTTGTGCTTCCAACCAACAGCCAAGGTATAGAACTTTCATCAAAAT
TAAAACTAAAAAAGGTTGTACTTCCCAAAAGCGTTTAACATAATTAAGTG
CAATCCTTCCATAACTTCAAACACTAAATTATATCCAGATGTTCTTAACT
TTATGAGTTTTAAGCCTTAAAATGTTCTCATTTTAACCATTTTGTGAGTA
TTTTTGTGCGATTTCCTAATAAATTTGGTGTTTTTGGTGGTTTGGAATTT
TAGAGTCCGTGAAGCCTTGAAATGTTCTTAACTTGCGTTCTTAATATTTT
TGCCATCGAGGTCGCGTGTGTTCTTATTTAGTTTGATCTTTCTTTGTGTT
TAGATGCTACAAAGACCACAACCAACCGTTCCAACGAAAAATCAACGGGA
AACGGTTTCTTTCAAAACAAAACAAATATTCTTTTGGTCACATTGATTGT
GATTATGACACTCATCATCCTCGGTGCCGTAGCTTTTGTCTTCTATCGAA
GAAGCGCCGTTTTAACAAAAAATATGGCGATGAACACTGGGGTCAGTAAT
AAAGCATATCAGGTTGAGTATTAA Coding sequence (CDS) from alignment at sc0000233_pilon:156672..161145- >XLOC_041761 ID=XLOC_041761|Name=XLOC_041761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2754bp|location=Sequence derived from alignment at sc0000233_pilon:156672..161145- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTATATCAATGTCTAGGCTTATTTATGCTCCTTTGTCAACTCTT
CCAGTTTACAGCTGCGCAGGAATTATATGACGGTATATCAATGTCTAGGC
TTATTTATGCTCCTTTGTCAACTCTTCCAGTTTACAGCTGCGCAGGAATT
ATCATGCACAGACAAGCTTCCTAATTGTTCGGTTTTATCTCCCATGCAAT
GTAGATCCACATCGGGTCAAACTAAATGTCCTATAAGTTGTGCAAATCCG
AAATGTTTCACAACCACCACAACAACAACCACCACAACAACAACAGCCGT
CCCTCCTACAATTTCTTCATCAGCATGCACAGACAAGCTTCCTAATTGTT
CGGTTTTATCTCCCATGCAATGTAGATCCACATCGGGTCAAACTAAATGT
CCTATAAGTTGTGCAAATCCGAAATGTTTCACAACCACCACAACAACAAC
CACCACAACAACAACAGCCGTCCCTCCTACAATTTCTTCATCAGAACTTA
ACAGCACTGTCTCAGTGAGATGTGATGACGAAAAGATGACCATTGTTATT
CCCAAAAGTGAAATCCCGAACCTAGAAGGCGATATTTCTCAATACAATAT
TTCATGGAATGATTTTACTTGTGGACCAAGTGAAAAATCCAATAAAACAC
ATGTGATTATGGTGGCTGGTTATTCGTCTTGTGGCACTAAAGCTGTGGAT
GATGGGGAAAACATCGTTTTTCGAAATAAGAACTTAACAGCACTGTCTCA
GTGAGATGTGATGACGAAAAGATGACCATTGTTATTCCCAAAAGTGAAAT
CCCGAACCTAGAAGGCGATATTTCTCAATACAATATTTCATGGAATGATT
TTACTTGTGGACCAAGTGAAAAATCCAATAAAACACATGTGATTATGGTG
GCTGGTTATTCGTCTTGTGGCACTAAAGCTGTGGATGATGGGGAAAACAT
CGTTTTTCGAAATAAGGTTTCTATCAGCAAAAATGCAACACATATTACTG
AAAAACCTCATCTCGAGACAGCTAGTAGCTATGTTAGTATTGCAGAGTGC
AGAGTTCAGAAGCTAGTTAATGTTTCGCAAGAAGATGGGCTCAATGTTAC
AATGCCTGATTCGGTGGTTGCAAAAACAAGTTTCTATCAGCAAAAATGCA
ACACATATTACTGAAAAACCTCATCTCGAGACAGCTAGTAGCTATGTTAG
TATTGCAGAGTGCAGAGTTCAGAAGCTAGTTAATGTTTCGCAAGAAGATG
GGCTCAATGTTACAATGCCTGATTCGGTGGTTGCAAAAACAAGTTCGACT
GACGATTTCACCGTGTCGATGAATCTCTACAAATCAGAAGATTTCAACAA
AATGTTCAGCTATCCTGCTGTTATCGATATTACTGACCGATTCAATTTGG
AAATCGAACTGGTAACTAGTTCCAGTCTTTTTATCATACCTCAAAATTGT
CACGCAACGCCTGACTCAAATCGAGATAATGCTCTCAAAGAAGACATCGT
CACAGACAGGTTCGACTGACGATTTCACCGTGTCGATGAATCTCTACAAA
TCAGAAGATTTCAACAAAATGTTCAGCTATCCTGCTGTTATCGATATTAC
TGACCGATTCAATTTGGAAATCGAACTGGTAACTAGTTCCAGTCTTTTTA
TCATACCTCAAAATTGTCACGCAACGCCTGACTCAAATCGAGATAATGCT
CTCAAAGAAGACATCGTCACAGACAGATGTCCAACACCTGGTCACGATTT
CCAAGAAGAAACACCAGCTGGCAATGGCAACAAATTCCGATTCTCTTTGA
ATACGTTTAGATTCAAAAACACGAACGGTATGGTCTACATTCATTGCACA
GCTCACGTATGCATGAAAAACAGCACAGATCCAAAATGTCGATTCGGTTG
TGTCGATAATCAAAGAAGAAGAAGGAGATCAGAAGATCAGACAAGACTTT
TTGGTGATTTGACCAAAGATTATGACATTCGAACTGGATTGATTGTTGTG
CTTCCAACCAACAGCCAAGATGTCCAACACCTGGTCACGATTTCCAAGAA
GAAACACCAGCTGGCAATGGCAACAAATTCCGATTCTCTTTGAATACGTT
TAGATTCAAAAACACGAACGGTATGGTCTACATTCATTGCACAGCTCACG
TATGCATGAAAAACAGCACAGATCCAAAATGTCGATTCGGTTGTGTCGAT
AATCAAAGAAGAAGAAGGAGATCAGAAGATCAGACAAGACTTTTTGGTGA
TTTGACCAAAGATTATGACATTCGAACTGGATTGATTGTTGTGCTTCCAA
CCAACAGCCAAGATGCTACAAAGACCACAACCAACCGTTCCAACGAAAAA
TCAACGGGAAACGGTTTCTTTCAAAACAAAACAAATATTCTTTTGGTCAC
ATTGATTGTGATTATGACACTCATCATCCTCGGTGCCGTAGCTTTTGTCT
TCTATCGAAGAAGCGCCGTTTTAACAAAAAATATGGCGATGAACACTGGG
GTCAGTAATAAAGCATATCAGGTTGAGTATTAAATGCTACAAAGACCACA
ACCAACCGTTCCAACGAAAAATCAACGGGAAACGGTTTCTTTCAAAACAA
AACAAATATTCTTTTGGTCACATTGATTGTGATTATGACACTCATCATCC
TCGGTGCCGTAGCTTTTGTCTTCTATCGAAGAAGCGCCGTTTTAACAAAA
AATATGGCGATGAACACTGGGGTCAGTAATAAAGCATATCAGGTTGAGTA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:156672..161145 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1162-1380:220 |
| Aaloc | 868-1158:838 |
| Aaloc | 652-864:2597 |
| Aaloc | 487-648:3074 |
| Aaloc | 253-486:3419 |
| Aaloc | 187-249:3917 |
| Aaloc | 79-183:4022 |
| Aaloc | 1-75:4475 |
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