XLOC_041759 (mRNA) -

Overview
NameXLOC_041759
Unique NameXLOC_041759
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000433_pilon:176889..178785-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041759 ID=XLOC_041759|Name=XLOC_041759|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1897bp|location=Sequence derived from alignment at sc0000433_pilon:176889..178785- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCGGGTACCTAATAGCCGGGGGGGTTGGAATAAGCAGGGGGGTTGGAA AAAATTTCAAAATTTAATAAGCGGGGGGGTTGGAATAAAAATGTCCTGGG TGGAAAATGTTTGAAAAGGAGGCTAATACAGCAGAATTAAGACAAAAAAG GGAACTTTCAAAAACATTTTCCCAAAAATTAATAAGCGGGGGGGTTGGAA TAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGGGGGG GGGGGACGGCTATTAGGTACCCGAGAGTAACAGAAAAACTCGAATAGAGG GAGTTGAAATTAAAAAGAGTTATAACCCCTCTTTCAGGGCAACAACCGAT GAAATCGACACGTGGAAGATCATTAATTTGATGCGTGTGATTGGTTCATT TCTTGGTTGGATTATGGTTGCTATGGCACCCGATGATGATCAAACTGCTG GTCAGTACTTTTACTTTGATGGTACCCGACTGTATACAGCGATTTCGTTT TCTAAGAGGCTTTACTAGTTGCTAGTTCGCTTTCGGCTATGTATATGAAT ACTCTATAGGCACAGTGACCCTTCTAATGTCCCTTATAACTTGTCTGGTT TTGGAACAAATATTCGGACTCGAAAGGCTTTACAATCAAATATAAAGAAA AATTACTTACGTTTCCTGTAGTTTTTTTGTAGTTTTGGTAAAAAAATACT TCTTTCTTTAAAAAATATTCTCTCTAATAAAACGTTTTCTTCGACTATTC AACACAATAATTAATTCTCCAAAATTGCCAGCAAATGTCATGCGTCTGTC TTCATGTTTTCAAGCGTTTGCCTACCACCAAATCCTAGAAAAAGAATAAT CATTTTAAAAATTCAGATGATGTTAGCTTGACAAAATAAAAAAGTACTAA TATGACTGCTTCTGACAGTATCATAAAAACAAATTTGGCTTTTGAAAGTG AAATGGCTTCAAATTACTGGGGCCTCTCTTGAAACTTTCATATCCCACTC AGGAAACTCCACTCTCATAAAAAGCTATTTTCTCAGAGTAAGATGATTTT CAAACCTACAGCAATACCAAATGTTAAATCTAGTCTGAATTAGGACCCTA ACCTAAGAATATGCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAAGT TAAGAATATCATTCTTATAAAAAAGCGTGTACTCTCGGGTACCTAATAGC CGTCCCCCCCGCTGATTAATCTTTCGAAAATTTTCCACCCAGGACATTCT TATTCCAACCCCCCCCCCCCCGCCGCTTATTGATTTTTGGGAAAATGTTT TTGAAAGTTCCCTCTTTTGTCCTAATTCTGCTGTATTGGCCTCATTTTCA AAAGTTTTCCACCCAGGGCATTTTTATTCCAACCCCCCCGCTTATTAATA TTTGAGATTTTTTCCACCCTCCCCCCCCCCCGCTTATTCCAAACACCCCC GGCTATTACTCTCGGGTACCTAATAGCCGGGGGGGGTTGGAATAAGCAGG GGGGTTGGAAAAAATCTCAAAATTTAATAAGCGGGGGGGTTGGAATAAAA ATGTCCTAGGTGGAAAATGTTTGAAAAGGAGGCTAATACAGCAGAATTAA GACAAAAAAGGGAACTTTCAAAAATATTTTCCCAAAAATTAATAAGCGGG GGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTA GCGGGGGGGACGGCTATTAGGTACCCGAGAGTAGGTACCCGAGGGTACTT TCGAATCTGAACTCTTGTTTATAAATTGTTTCTGCTCTTTCTTTAATTAC AGAAACGATAAAGAAAGCTTCAGAAAAAGAAGACAACGCTCTTAACCAGT TCGAAATGCATTCTGTGCAAACGTCAACTATACCCAACTCAAACTGA

Coding sequence (CDS) from alignment at sc0000433_pilon:176889..178785-

>XLOC_041759 ID=XLOC_041759|Name=XLOC_041759|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=726bp|location=Sequence derived from alignment at sc0000433_pilon:176889..178785- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCGGGTACCTAATAGCCGGGGGGGTTGGAATAAGCAGGGGGGTTGGAA
AAAATTTCAAAATTTAATAAGCGGGGGGGTTGGATCTCGGGTACCTAATA
GCCGGGGGGGTTGGAATAAGCAGGGGGGTTGGAAAAAATTTCAAAATTTA
ATAAGCGGGGGGGTTGGAGTACCCGAGAGTAACAGAAAAACTCGAATAGA
GGGAGTTGAAATTAAAAAGAGTTATAACCCCTCTTTCAGGGCAACAACCG
ATGAAATCGACACGTGGAAGATCATTAATTTGATGCGTGTGATTGGTTCA
TTTCTTGGTTGGATTATGGTTGCTATGGCACCCGATGATGATCAAACTGC
TGGTACCCGAGAGTAACAGAAAAACTCGAATAGAGGGAGTTGAAATTAAA
AAGAGTTATAACCCCTCTTTCAGGGCAACAACCGATGAAATCGACACGTG
GAAGATCATTAATTTGATGCGTGTGATTGGTTCATTTCTTGGTTGGATTA
TGGTTGCTATGGCACCCGATGATGATCAAACTGCTGAAACGATAAAGAAA
GCTTCAGAAAAAGAAGACAACGCTCTTAACCAGTTCGAAATGCATTCTGT
GCAAACGTCAACTATACCCAACTCAAACTGAAAACGATAAAGAAAGCTTC
AGAAAAAGAAGACAACGCTCTTAACCAGTTCGAAATGCATTCTGTGCAAA
CGTCAACTATACCCAACTCAAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041759XLOC_041759-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000433_pilongenomesc0000433_pilon:176889..178785 -
Properties
Property NameValue
Aaloc271-363:94
Aaloc85-267:1632
Aaloc1-84:1898