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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000233_pilon:176604..180600+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041750 ID=XLOC_041750|Name=XLOC_041750|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3997bp|location=Sequence derived from alignment at sc0000233_pilon:176604..180600+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGCTATCGCATTGATAGTGTTTGTAGCCATTCAGCAATGTATTGGTGT
GAAGAATCATCAAACTTTCTTCGGGATATACGGAAAGTTTATCCCAGCCA
ATAACCAGGGTAGTGTTAAAGGTTCACAAAGAAACATTTTACCACGTGTC
AATGGCGAAGAGGGAGGGGACGTTAAACTGACCCTCGGCCCCGCCATAAA
GCCCATCAAAACTCGCGATGGACCATTCCAACCGAGTCAACAAGTCAGTG
AGATCATTGGCCAAGTGATGCATTTCGACGAAAATATGTTAAACGGGCGT
GGTCCATCTGTTGCTCGACATCACCCAGCACCCTCCGCCCATCGAGAGGC
GGAAGAAGATGAAGAGGAACAAACACCGCCCAATGATGAATTGGCGTCTG
AACACGGACCAACTTCACAGGAAGAAACAATAGAAAACGACGATTACAAC
AACGTGGAGAAAGAAGAGTACATCGCGAAAGGGCGTGAAGAAAGCATGCA
TTTCTCAAAATTGTTAGACCAATTAGAAGATGATCCTGGACTTGGTAATT
CACAGACCGGAAACTTAAAACCGACGCATAAGCTTGAACAAGGTCGTCTG
TACAATGGCTTCAAAGCAACGCCTAAATTAAAGCATCCTTTGATTCACCG
TAAGAAAGGATGTACGGGGAAGAGATGTGATATAGCAGGGGGATTTTTTG
GCGCAACTGATGGACatttcgaaccaccaaatgaaGATGAAGTACCTTAT
GATGTAGGAGGTAATAGAACCATTATAATTTCGCATTGATTCAATAATCA
ATTAAATACGGTACAAACATAGGCCTTGTATGTTCCTCATACATTTCTTA
CAAAACCTTATTACAACAAATCTGCAGACATGGTGTAAGTACTGTGAAAC
GATATTGAAATAATTTCACTGTAAAATTCTTTGCGTGTTTAAAACTTAAA
TACATGTTTTCTTTACGAATCTTTTGATTAAAACCACACCATTTCTTTTA
TTGCAGACACTCCAATCATTGGCGATGCAGAAGGTCCGGTCCAAGATGAA
GCTATGATGGCTGATACTTTATTTCACCTTCACAAAGTGTATGACAAAGA
GAAACAGGCCTTAGAATTGCTGGGCCACCATAATGGACATCACTTTCACC
ACGGATGTAAGTTTGGACATTTAAAGATAACCATCATCATGGCTCGACCA
ACAAGGCTTCTCAAAACATGAATGAAGTGTTCTAAAAATTATTATGTTCT
TCTTTGTAAAGCAGCTAAATTGAGTCTGGTAGAATTAAATCATATTGTCA
AAGGACAgttcctttttaatttttagtggAAATTAAAAGGTTAAGCGATA
ACGTTAGTTCTCCTTTAACGAATTCATTATTCCATTCTTCTCATTAGTTG
GAGGTCATTACTACCATGAATTTCCACACCACGATGTCCATGACGCGCAT
GACGAACATCATCACACTCAAATGATCCCCATCGGTATCGAACTACCTAA
TCACTTGCATTCTCCACAGAACTTTCGTCACCATGGTGGTGCTACCACTG
TGGCTGGAGGTGCCGCTGGTGGAACTGTAGCAGGCGGTGCTGCTGGTGGG
ACAGTAGGAGGTGGAGCAGCTGGAGGAGTTGCCGGTGGAGGTGCACCCGG
AGGAGTTGCTGGTGGAGCCGCTGGAGGAGTTGAAGGTGGCGCTGCTGGCG
GAGCCGCTGGAGGAGTTGAAGGGGCCGCTGGAGGTGCAGCCggaggagtc
gctggtggagccgctggaggagcagctggaggagttgaaggtggagctgc
tggaggagTTGAAGGTGGAGCTGCCGGAGGAGTTGAAGGtggaGCTgctg
gcggaagtggagctggaggaagccgctggtggagctggagctgctggcgg
agTTGAAGgtggcgctgctggcggagtgctggagctgctgggaggaggct
ggaggagtctggtgaggtggaggcggatgctggaggagttgaaggtggag
CCGCTGGCGGAGTTGAAGGTGGAGCTGCTGGAGGTATCGAAGGTGGAGCT
GCTGGAGGTATTGAAGGTGGAGCTGCTGGAGGTATCGAAGGTGGTGCTGC
TGGGGGTACTGCTGGAGGGGCTGCCGGGGGAGCTACAGGTGGAATAGCTG
GAGGTGCAGAAGGAGGGGCTGCGGTGGAGGTGGCGCAGGAAGTGAAGCTG
CAGCTGCTATTGGAGGAGAAGCTGGAGCGGCTGCAGCTGGAGGAGCAGAG
GCTGGCGGAGCAGCAGGCGGATCTGTAGGAGCTGAAGAGGGAGCAAAAGA
AGGGGCTTCTGAAGGTGCAGCGACTGGTGCAGCTGAAGGGCGGCAGCAGG
AGCAGCTGGCGGTGCAAGTACTGGGGCTGCAGAGGGGGCTGTGGAAAAAG
TGGCAGAGGCTGTTGCAAGTGGAGATGGTGATGATCCAGAAAAATTAGTG
TCTGCAGCAAAAGAAGGCGCTTCAAAAGGAGCCGCAGAGGGTGTTGCTAC
CGGGATATCAGAAGGTGCGAAACTCGGCGCAGAAGCAGGAGCTGCTGCTG
GTGGTTCACAAGGAGGAGCTGCAGGTGCAGCTGAAGGATCTATCCAAGGA
AATGCAGCAGGAGTAACTGGGGCGATGTCGGGAGGAGCAGAAGGAGGTGC
AGCAGTCGGGGAGCAGCTGGAGGTGAAGCAGGTGGCCAGGCTGGTGGAGC
GATCGGTGCTTCTGCGGGAGGCGCCGCTGGTGCTGCGGTGGGTGCGGCAG
CAGGAGAAGCAGCCGGTGGTGCAGTTGTTTCAGCTGGAAAGTTATCTGGA
AAAGTAGAAGGCTCCGCAGCAAAGGGAGCAGCTAAGCTAGCAGGTGCAGC
TGGTGCTATGCAAGCATCAGGAGCTGCACAGACTGCTGGTGCTTTGGGTG
CAGCTGGAGCCGCTGAAAGTGCAGGGATAgcaggtggtgcagctggtatg
gctgcaggtggaggaggtgctgcggcagcTGGtggtggtggtggtTCGAT
TGCAGGAGGAGGAGCTATGGCTGCTGGCGGTGCAGCTGGTGGCTCGATGA
AAATTGGGGGAGGGATCACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCA
GGAACCGCAGGTGGAGGAGGTAGTATGAAGATTGGAGGTGGTATGGCAGG
TGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGTGCTGGAGGTTCACTTA
AGATTGGAGGTGGGATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCA
GGAGGCGCTGGAGGTTCGCTGAAGATTGGAGGTGGGATGAAAGCGTCAGG
AGCTATATCAGGTGGTATATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTG
GTGGTGCCATGAAAATTGGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGA
GGGGCAATGAAGATGGCCGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGG
TGGCGCAGGGGGTGCTATGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGA
GTTCAAGCTACGGTTCAAAGACAGGAGGATATGGACGAACCATTGATGAG
GATGAAGACAAGAAAGAATCGATGAAGAAATTATCACTGAGTGATGTTTG
GTCACGAAAGATCGTCGCATTGAAAGCGAGAGGAAGCGAAGCAAATTTTG
TACCCAAAATTGTCACTAGCGGAGGAATCCCTGGCGAAACCGTAAAGATT
CGTAAACCAGCAATGACCAAGAAGTTTGTACATTTAATGGAGGATCTGGC
TGGTAAATTAGCTGTCAATAAACTGAACGTAGCagaagaatttgtgaaaa
atttgaagaagaagaaagaagaggaagTTTATGAATCGATAGGTGTTACC
AGATCTCTTaaaagtaaatcgaaaatattttcagcaaaaaacgcagtcaa
aaaacatttcattaaaaagttgaCAACgaataacaataacaaacatcATA
AGAGAGCCGTTAAAAAGTCCAAAGTCAACGTTGGAAATGCTCTCTAG Coding sequence (CDS) from alignment at sc0000233_pilon:176604..180600+ >XLOC_041750 ID=XLOC_041750|Name=XLOC_041750|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6330bp|location=Sequence derived from alignment at sc0000233_pilon:176604..180600+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAGCTATCGCATTGATAGTGTTTGTAGCCATTCAGCAATGTATTGGTGT
GAAGAATCATCAAACTTTCTTCGGGATATACGGAAAGTTTATCCCAGCCA
ATAACCAGGGTAGTGTTAAAGGTTCACAAAGAAACATTTTACCACGTGTC
AATGGCGAAGAGGGAGGGGACGTTAAACTGACCCTCGGCCCCGCCATAAA
GCCCATCAAAACTCGCGATGGACCATTCCAACCGAGTCAACAAGTCAGTG
AGATCATTGGCCAAGTGATGCATTTCGACGAAAATATGTTAAACGGGCGT
GGTCCATCTGTTGCTCGACATCACCCAGCACCCTCCGCCCATCGAGAGGC
GGAAGAAGATGAAGAGGAACAAACACCGCCCAATGATGAATTGGCGTCTG
AACACGGACCAACTTCACAGGAAGAAACAATAGAAAACGACGATTACAAC
AACGTGGAGAAAGAAGAGTACATCGCGAAAGGGCGTGAAGAAAGCATGCA
TTTCTCAAAATTGTTAGACCAATTAGAAGATGATCCTGGACTTGGTAATT
CACAGACCGGAAACTTAAAACCGACGCATAAGCTTGAACAAGGTCGTCTG
TACAATGGCTTCAAAGCAACGCCTAAATTAAAGCATCCTTTGATTCACCG
TAAGAAAGGATGTACGGGGAAGAGATGTGATATAGCAGGGGGATTTTTTG
GCGCAACTGATGGACatttcgaaccaccaaatgaaGATGAAGTACCTTAT
GATGTAGGAGTCAGCTATCGCATTGATAGTGTTTGTAGCCATTCAGCAAT
GTATTGGTGTGAAGAATCATCAAACTTTCTTCGGGATATACGGAAAGTTT
ATCCCAGCCAATAACCAGGGTAGTGTTAAAGGTTCACAAAGAAACATTTT
ACCACGTGTCAATGGCGAAGAGGGAGGGGACGTTAAACTGACCCTCGGCC
CCGCCATAAAGCCCATCAAAACTCGCGATGGACCATTCCAACCGAGTCAA
CAAGTCAGTGAGATCATTGGCCAAGTGATGCATTTCGACGAAAATATGTT
AAACGGGCGTGGTCCATCTGTTGCTCGACATCACCCAGCACCCTCCGCCC
ATCGAGAGGCGGAAGAAGATGAAGAGGAACAAACACCGCCCAATGATGAA
TTGGCGTCTGAACACGGACCAACTTCACAGGAAGAAACAATAGAAAACGA
CGATTACAACAACGTGGAGAAAGAAGAGTACATCGCGAAAGGGCGTGAAG
AAAGCATGCATTTCTCAAAATTGTTAGACCAATTAGAAGATGATCCTGGA
CTTGGTAATTCACAGACCGGAAACTTAAAACCGACGCATAAGCTTGAACA
AGGTCGTCTGTACAATGGCTTCAAAGCAACGCCTAAATTAAAGCATCCTT
TGATTCACCGTAAGAAAGGATGTACGGGGAAGAGATGTGATATAGCAGGG
GGATTTTTTGGCGCAACTGATGGACatttcgaaccaccaaatgaaGATGA
AGTACCTTATGATGTAGGAGACACTCCAATCATTGGCGATGCAGAAGGTC
CGGTCCAAGATGAAGCTATGATGGCTGATACTTTATTTCACCTTCACAAA
GTGTATGACAAAGAGAAACAGGCCTTAGAATTGCTGGGCCACCATAATGG
ACATCACTTTCACCACGGATACACTCCAATCATTGGCGATGCAGAAGGTC
CGGTCCAAGATGAAGCTATGATGGCTGATACTTTATTTCACCTTCACAAA
GTGTATGACAAAGAGAAACAGGCCTTAGAATTGCTGGGCCACCATAATGG
ACATCACTTTCACCACGGATTTGGAGGTCATTACTACCATGAATTTCCAC
ACCACGATGTCCATGACGCGCATGACGAACATCATCACACTCAAATGATC
CCCATCGGTATCGAACTACCTAATCACTTGCATTCTCCACAGAACTTTCG
TCACCATGGTGGTGCTACCACTGTGGCTGGAGGTGCCGCTGGTGGAACTG
TAGCAGGCGGTGCTGCTGGTGGGACAGTAGGAGGTGGAGCAGCTGGAGGA
GTTGCCGGTGGAGGTGCACCCGGAGGAGTTGCTGGTGGAGCCGCTGGAGG
AGTTGAAGGTGGCGCTGCTGGCGGAGCCGCTGGAGTTGGAGGTCATTACT
ACCATGAATTTCCACACCACGATGTCCATGACGCGCATGACGAACATCAT
CACACTCAAATGATCCCCATCGGTATCGAACTACCTAATCACTTGCATTC
TCCACAGAACTTTCGTCACCATGGTGGTGCTACCACTGTGGCTGGAGGTG
CCGCTGGTGGAACTGTAGCAGGCGGTGCTGCTGGTGGGACAGTAGGAGGT
GGAGCAGCTGGAGGAGTTGCCGGTGGAGGTGCACCCGGAGGAGTTGCTGG
TGGAGCCGCTGGAGGAGTTGAAGGTGGCGCTGCTGGCGGAGCCGCTGGAG
gagttgaaggtggagCCGCTGGCGGAGTTGAAGGTGGAGCTGCTGGAGGT
ATCGAAGGTGGAGCTGCTGGAGGTATTGAAGGTGGAGCTGCTGGAGGTAT
CGAAGGTGGTGCTGCTGGGGGTACTGCTGGAGGGGCTGCCGGGGGAGCTA
CAGGTGGAATAGCTGGAGGTGCAGAAGGAGGGGCTGCGGTGGAGGTGGCG
CAGGAAGTGAAGCTGCAGCTGCTATTGGAGGAGAAGCTGGAGCGGCTGCA
GCTGGAGGAGCAGAGGCTGGCGGAGCAGCAGGCGGATCTGTAGGAGCTGA
AGAGGGAGCAAAAGAAGGGGCTTCTGAAGGTGCAGCGACTGGTGCAGCTG
AAGGGCGGCAGCAGGAGCAGCTGGCGGTGCAAGTACTGGGGCTGCAGAGG
GGGCTGTGGAAAAAGTGGCAGAGGCTGTTGCAAGTGGAGATGGTGATGAT
CCAGAAAAATTAGTGTCTGCAGCAAAAGAAGGCGCTTCAAAAGGAGCCGC
AGAGGGTGTTGCTACCGGGATATCAGAAGGTGCGAAACTCGGCGCAGAAG
CAGGAGCTGCTGCTGGTGGTTCACAAGGAGGAGCTGCAGGTGCAGCTGAA
GGATCTATCCAAGGAAATGCAGCAGGAGTAACTGGGGCGATGTCGGGAGG
AGCAGAAGGAGGTGCAGCAGTCGGGGAGCAGCTGGAGGTGAAGCAGGTGG
CCAGGCTGGTGGAGCGATCGGTGCTTCTGCGGGAGGCGCCGCTGGTGCTG
CGGTGGGTGCGGCAGCAGGAGAAGCAGCCGGTGGTGCAGTTGTTTCAGCT
GGAAAGTTATCTGGAAAAGTAGAAGGCTCCGCAGCAAAGGGAGCAGCTAA
GCTAGCAGGTGCAGCTGGTGCTATGCAAGCATCAGGAGCTGCACAGACTG
CTGGTGCTTTGGGTGCAGCTGGAGCCGCTGAAAGTGCAGGGATAgcaggt
ggtgcagctggtatggctgcaggtggaggaggtgctgcggcagcTGGtgg
tggtggtggtTCGATTGCAGGAGGAGGAGCTATGGCTGCTGGCGGTGCAG
CTGGTGGCTCGATGAAAATTGGGGGAGGGATCACAGGAGGTGCAGCAGGA
GCATTGAAAGCTTCAGGAACCGCAGGTGGAGGAGGTAGTATGAAGATTGG
AGGTGGTATGGCAGGTGCAGCTGGAGGAAGTGCAGGAATATCAGGAGGTG
CTGGAGGTTCACTTAAGATTGGAGgagttgaaggtggagCCGCTGGCGGA
GTTGAAGGTGGAGCTGCTGGAGGTATCGAAGGTGGAGCTGCTGGAGGTAT
TGAAGGTGGAGCTGCTGGAGGTATCGAAGGTGGTGCTGCTGGGGGTACTG
CTGGAGGGGCTGCCGGGGGAGCTACAGGTGGAATAGCTGGAGGTGCAGAA
GGAGGGGCTGCGGTGGAGGTGGCGCAGGAAGTGAAGCTGCAGCTGCTATT
GGAGGAGAAGCTGGAGCGGCTGCAGCTGGAGGAGCAGAGGCTGGCGGAGC
AGCAGGCGGATCTGTAGGAGCTGAAGAGGGAGCAAAAGAAGGGGCTTCTG
AAGGTGCAGCGACTGGTGCAGCTGAAGGGCGGCAGCAGGAGCAGCTGGCG
GTGCAAGTACTGGGGCTGCAGAGGGGGCTGTGGAAAAAGTGGCAGAGGCT
GTTGCAAGTGGAGATGGTGATGATCCAGAAAAATTAGTGTCTGCAGCAAA
AGAAGGCGCTTCAAAAGGAGCCGCAGAGGGTGTTGCTACCGGGATATCAG
AAGGTGCGAAACTCGGCGCAGAAGCAGGAGCTGCTGCTGGTGGTTCACAA
GGAGGAGCTGCAGGTGCAGCTGAAGGATCTATCCAAGGAAATGCAGCAGG
AGTAACTGGGGCGATGTCGGGAGGAGCAGAAGGAGGTGCAGCAGTCGGGG
AGCAGCTGGAGGTGAAGCAGGTGGCCAGGCTGGTGGAGCGATCGGTGCTT
CTGCGGGAGGCGCCGCTGGTGCTGCGGTGGGTGCGGCAGCAGGAGAAGCA
GCCGGTGGTGCAGTTGTTTCAGCTGGAAAGTTATCTGGAAAAGTAGAAGG
CTCCGCAGCAAAGGGAGCAGCTAAGCTAGCAGGTGCAGCTGGTGCTATGC
AAGCATCAGGAGCTGCACAGACTGCTGGTGCTTTGGGTGCAGCTGGAGCC
GCTGAAAGTGCAGGGATAgcaggtggtgcagctggtatggctgcaggtgg
aggaggtgctgcggcagcTGGtggtggtggtggtTCGATTGCAGGAGGAG
GAGCTATGGCTGCTGGCGGTGCAGCTGGTGGCTCGATGAAAATTGGGGGA
GGGATCACAGGAGGTGCAGCAGGAGCATTGAAAGCTTCAGGAACCGCAGG
TGGAGGAGGTAGTATGAAGATTGGAGGTGGTATGGCAGGTGCAGCTGGAG
GAAGTGCAGGAATATCAGGAGGTGCTGGAGGTTCACTTAAGATTGGAGGT
GGGATGAAAGCGTCAGGAGCTATATCAGGTGGTATATCAGGTGGCGGCGG
GTTAAGTGTTGGTGGTGGTGGTGCCATGAAAATTGGAGGCGGCGGTGGGT
TGAAGGTTGGTGGTGGAGGGGCAATGAAGATGGCCGGAGGAGCGGCTGCT
GGGCTGAAAGCGGCAGGTGGCGCAGGGGGTGCTATGGCGGCAGGAGGTGG
AAGTTCTTCATCGTGGAGTTCAAGCTACGGTTCAAAGACAGGAGGATATG
GACGAACCATTGATGAGGATGAAGACAAGAAAGAATCGATGAAGAAATTA
TCACTGAGTGATGTTTGGTCACGAAAGATCGTCGCATTGAAAGCGAGAGG
AAGCGAAGCAAATTTTGTACCCAAAATTGTCACTAGCGGAGGAATCCCTG
GCGAAACCGTAAAGATTCGTAAACCAGCAATGACCAAGAAGTTTGTACAT
TTAATGGAGGATCTGGCTGGTAAATTAGCTGTCAATAAACTGAACGTAGC
agaagaatttgtgaaaaatttgaagaagaagaaagaagaggaagTTTATG
AATCGATAGGTGTTACCAGATCTCTTaaaagtaaatcgaaaatattttca
gcaaaaaacgcagtcaaaaaacatttcattaaaaagttgaCAACgaataa
caataacaaacatcATAAGAGAGCCGTTAAAAAGTCCAAAGTCAACGTTG
GAAATGCTCTCTAGGTGGGATGAAAGCGTCAGGAGCTATATCAGGTGGTA
TATCAGGTGGCGGCGGGTTAAGTGTTGGTGGTGGTGGTGCCATGAAAATT
GGAGGCGGCGGTGGGTTGAAGGTTGGTGGTGGAGGGGCAATGAAGATGGC
CGGAGGAGCGGCTGCTGGGCTGAAAGCGGCAGGTGGCGCAGGGGGTGCTA
TGGCGGCAGGAGGTGGAAGTTCTTCATCGTGGAGTTCAAGCTACGGTTCA
AAGACAGGAGGATATGGACGAACCATTGATGAGGATGAAGACAAGAAAGA
ATCGATGAAGAAATTATCACTGAGTGATGTTTGGTCACGAAAGATCGTCG
CATTGAAAGCGAGAGGAAGCGAAGCAAATTTTGTACCCAAAATTGTCACT
AGCGGAGGAATCCCTGGCGAAACCGTAAAGATTCGTAAACCAGCAATGAC
CAAGAAGTTTGTACATTTAATGGAGGATCTGGCTGGTAAATTAGCTGTCA
ATAAACTGAACGTAGCagaagaatttgtgaaaaatttgaagaagaagaaa
gaagaggaagTTTATGAATCGATAGGTGTTACCAGATCTCTTaaaagtaa
atcgaaaatattttcagcaaaaaacgcagtcaaaaaacatttcattaaaa
agttgaCAACgaataacaataacaaacatcATAAGAGAGCCGTTAAAAAG
TCCAAAGTCAACGTTGGAAATGCTCTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233_pilon | genome | sc0000233_pilon:176604..180600 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2476-3189:3284 |
| Aaloc | 2311-2472:3047 |
| Aaloc | 2272-2298:3020 |
| Aaloc | 1900-2259:2660 |
| Aaloc | 1582-1896:2343 |
| Aaloc | 1414-1578:2176 |
| Aaloc | 1228-1413:1988 |
| Aaloc | 913-1224:1400 |
| Aaloc | 763-909:1009 |
| Aaloc | 1-759:1 |
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