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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000446_pilon:108622..113054- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041734 ID=XLOC_041734|Name=XLOC_041734|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4433bp|location=Sequence derived from alignment at sc0000446_pilon:108622..113054- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATTATCGCCCATTATTAAAGGTAACTACTGCAAGAATTAGTTCTG
TCAAATTAATGTTTACTTAAAATATTTATAATCCCTCGGAAAATAAAAGA
ATCTTGACAAAAAGTGGGGAGAACCCATGAAAACTGATCCTGTGAAACTT
GTCAACTTAGTTCCTTTTGCACAAAATTAGTTCTCTTATACATTATTTCA
AAATCAACCTTTACACTCTGCACTTTTTCTTTTATTGACTTCCAAAACTC
CATTCTCATCTTAGTGTTACAGCAGATGTTTTGAATTTTGTGATTGAATT
AGGTCAGTTACACAGGAAAGAATTGGTATATTGCATTATGAAAACTGATT
TTTCACATGGGTGTGAAAGTGTAAATAACACTTGTTTTTGAATTCAGTAT
TAGACTAAAACAATTTAAATTTAAGTAAGAATTATTGATACTTATTCAAT
AAGGTGTAAGCACAGGTGAGGTCAGTAGTTTTAAATCTTCTACAGTTGTA
GGTAGTAATATCAAATAAATGGTATGTATCTGTAATTTTTTGATTTTTAC
TACCTAGTAGTAAAAATTAATTTTTTTTGAAAAGTTGTTTGCTATAGAAA
AAAAATTCTCGAAATGTTTTGTCAATATAAAAATTACTTTAATTCTAAGG
GCAAAACATAAATTTTTGCACTAAGTGAAAAATGTGTCTCGGAAATGATG
ATTTCTTTAGCTTTTTTTGTGAAATATTTCTGAAAAGCAACGAAAAATAG
GTGGTCTCAATGCAGCTCAATGTCAAATTGTACCAAAAATTTTACTACCA
GGGTTTCCAGGGGGGGGGGTCGGTAGTAAAATCTCAGACATATATGAGTA
GTAAAAGGATTTTTACGAATTTTTACATACCACCACCCAGACTCTTGGAA
GAGGTATTTTACTACCCTGGTAGTAAAAGCTTTTGGGACAATTTGTCATG
GAGACCACCTATTTTTTGGTTGCTTTTCGGACTGATTTTGCAAAAAAAGC
TAAAAAATGATTATTTCTGTGACACATTTTTCACGTAGTGCAAAAATTAA
TGTTTTTCCCTTAGAATTAAAGTCTTTTTATATTGACAAAAAATTTCGAG
AATTTTTTGTTTGCAGCAAACAACTTTCCAACAGAAAATTTTTTCAAATT
ATAAAAATTTTCAGATTTTTTCAGAAAAGTCATCAAGAAAATTAAAAGAA
TTACAAAAAATAGCTAAAATTTGCTAATTTTACCAGTTTTAACTACCCAG
GTAGTAAAATTGTTTCAACATTTAACACATAGATACCACCCATTTTAGTA
TTTAACTACCCTGGGTAGTAAAATTTTTTTTCGATTTTTCGTCACACCAC
CACCGTAGTAAACGTCATTATGTCTGAGATTTTACTACCGACCCCCCCCC
CTGGGGTTTCTTGTCAAATTTTGCTATGTAAAGCACTACTAGGTCTTAAA
ACATCAATTGTGGACACGGTTGATGTTTTTTATCCACAGTCAATCATTTT
TATGGACAGTCAATATCCAAACATCGACTGTCAATACTTTTCATCAACTG
TCAATGTCCAGATATCAGCAGTCAATATCCAGACATCAGCAGTCAATATC
CAAACATCGACTGTCAATATCCAAACATCGACTGTCAATACTTTTCATCA
ACTGTTGAGATTATTTAATTGACTGCTGATGTCTGGATATTGACAGTTGT
TGAAAAGTATTGACAGTCGATGTTTGGATATTGACTGTCCATAAAAATGA
TTGACTGTCCATAAAAATGATTGAATGTGGATAAAAAACATCAACCGTGT
CCACAATTGATGTTTTCAGGCCTAGTAGTGAAGGTTGTCAGTTGATTGGT
TTAAGTGCTTGTTTTTAATTGTAGCTTTCTGTTTAGATCATGATGACCTG
ATTCAACGAATGCTAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGAA
ATTAGAGTCCAAAAGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTTC
GAAGGACGACCAGTGTAAGGAAAAGTAGTTATTTAGCTGGAAAGAGAAAT
TTGTTTTTCTTATTTATTATGTTTTTTTCTCGATTTCGAAATATTGAAAT
ATATAATTTTTAGAGAGTTTACTGCTCTGGCTGCAGATGCTAGTTAAAAA
GGAGAATAACACATTTTCGTGGCCTTTTCTTTAATTAAATAGTTTTATTT
GTAGTCTCAAAAACATGTTTTCATTTCAGAATTACATCAAAAACAGCTAT
AAGAAAGTTGCTGAAAAACACAATAAGCACTGGGACTTTGATCAAAGGTA
TGAAAATGTAACAATGTAACTTTCAAAATTGTTACAAGATTCTATTTATT
ATTTAAGGGGGGTTTCAATAATTGGTAAAACTTTGGCCTGCAATGCCAGT
TTACTACCATAATGCCATTTAAATTTAAAAATCTTTCACCTGCGGACCAG
TTATTGGTATTGTAAAGGAGTGTTACTGATGTGTGTCCAAATTGCAAACA
AAAAAAAACAACATTAGAATTAGTTGTCAAAAACATTGGTAACAAGAATA
TATTCAGGGTTTTTTTTAATTTTCTTTCCACTTAGGGGGGTCTTTCTACA
AGGGGGTTCATAAGGTGTCTTGACCCCTTACCAAATAAAAGCACAAAACC
TTGCAAATTAAGTGAAAACCCCTTTTTAAAAATAAAACGTTGAATTTACA
TTTGCTAGATGCATTATATTAAAGTGGTTTTTTATAACTTTACAGCGTGT
TTGCCGACTGCAATCATGAGTTAACCCAGAAGGTTAAATTGAACGCACTG
GCGCTGGATAAGACCATTACCCAGGATGAGTTCCAAGGTTAGTACATAAC
CGTATTATTGTGTTTTTATTGTTGCCAGGCTACTGTATATTTAAAAAGTT
AAAGTTTAAGCTTCTCTCTTATCAAGATCTAGTATAAAAATTAGTAATTG
TTTTATTTTTTTCAGTTGGAGTTCAGACCTACTTCCATTCAATAAAGTAC
TACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAAGAAATATAATCA
AAGAAAAGTGACGGTACGCATCCATGCTTTCTTTAATTCCGTTTTCTCTT
TTCTCAAACCAGTATTATTAGATTGGCCTCTTGGAAAAAAATTTAACCAT
AAATGCTTATTGTATTGTTAGTGTGGTGCTGATTCATACTTTTTGAGCTC
ATAATTTTTATACTTGTGTGAATATTTGAGCAGGGCTTAGGTAAGTTCCT
TGATGAGCCACGTCTCTGTATGATCAATCTGTCGAGAGAAGAGAATCTCA
GCAGATAGTTTTCATTTTTCGAATTTGAGTGAGCTCTCCTGCACCCAATA
TTTCCATTTGGGGATTATCGCTGGAGATGGACTTCAAAAGTGGGATTCAA
GGGTATTTTTTAACTTTGAAAATGTTTAATTTGAAATATTTAATTTGAAA
TGATCAAGTTGCTTAAGTTTCGGATCGTTTTATGTGTCACATGCTAATTA
TATTTCTGAAATAGCTAAGAAAGGTTCAGAAACCACTCTGCACTCCTAAA
TCATTAACGTTCAAACAAAGGAAAGTAATCATTCAGAAAATCCAAAAACA
CACTACATGTGACACGACAAGTCACAAATTAGTAAATAGTAGACCGGTAA
GCGAAAGCAAATAAAGCAATTGAGAAATGGAAAATTATAAATATTTTTTT
TGGCATTTTTTAAATTCATAAAGTTAATAAACAATTCCATCTATGAAAAA
GACACAACAAAGATTATAACGTTACTAGCCAAAGATTCGAAAATTGGCTG
TCTTCCATAAATATTTTTAAATTTGTTTTCCAAACGAGGAATTTTCGAGG
AATTTTCGCTCCCTGTTTAAAAGCACGGTCCATTAGTACAGCAGAACAAA
AATTTTCCTAAGATGAGCTAACTCTTGCAATACGAATGACCTCAGCTCCA
ACGCAAGAATAAAACATGTTGGAGGGCATTTTGCTAGAACAAAATGGGAG
ACGTACAATCTCAAATGAGCAGCATCTCTCTTGTCAAAAAGTTTTTTATC
AAGGTGACCGTTATGTCCGTGATGTTAGTTATTATTATACTTCACTTTCT
TTTTAGAAACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGTAATTCACT
AGAACCAGACTTAAAAGCAAAGATTCAAAAAGTTCTTGAAGTAGAGTTCA
TGTCATCTGAAGAAGATAAATCTGACGGGGAGGTTGACCATTTCGAGACG
CGACCTCTAAGATGGCGCAGTTTGGAATGTGACCGACATTTCGAAATGCT
AGATAAAACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCGACAAACGG
TTATCAGAAAAATGGGCCCATATAGCAGTCGACCAGCACCACAATGTACC
GAACAAAACAGTTGGGCCATACGTCAGAAATAA Coding sequence (CDS) from alignment at sc0000446_pilon:108622..113054- >XLOC_041734 ID=XLOC_041734|Name=XLOC_041734|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000446_pilon:108622..113054- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATTATCGCCCATTATTAAAGATGACATTATCGCCCATTATTAAAG
ATCATGATGACCTGATTCAACGAATGCTAAAAAATCAGAAGATGCTTCTA
GAGAGGATCGAGAAATTAGAGTCCAAAAGTAGAAACGAAAAGAAATCGAA
GAAGATCACAGTTCGAAGGACGACCAGTATCATGATGACCTGATTCAACG
AATGCTAAAAAATCAGAAGATGCTTCTAGAGAGGATCGAGAAATTAGAGT
CCAAAAGTAGAAACGAAAAGAAATCGAAGAAGATCACAGTTCGAAGGACG
ACCAGTAATTACATCAAAAACAGCTATAAGAAAGTTGCTGAAAAACACAA
TAAGCACTGGGACTTTGATCAAAGAATTACATCAAAAACAGCTATAAGAA
AGTTGCTGAAAAACACAATAAGCACTGGGACTTTGATCAAAGCGTGTTTG
CCGACTGCAATCATGAGTTAACCCAGAAGGTTAAATTGAACGCACTGGCG
CTGGATAAGACCATTACCCAGGATGAGTTCCAAGCGTGTTTGCCGACTGC
AATCATGAGTTAACCCAGAAGGTTAAATTGAACGCACTGGCGCTGGATAA
GACCATTACCCAGGATGAGTTCCAAGTTGGAGTTCAGACCTACTTCCATT
CAATAAAGTACTACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAAG
AAATATAATCAAAGAAAAGTGACGTTGGAGTTCAGACCTACTTCCATTCA
ATAAAGTACTACAGTGGCAAGAAAACAGATACATACTTGTGCGAGAAGAA
ATATAATCAAAGAAAAGTGACGAAACGTGACAAGCGGAGAGCGACTTTGA
GTGGGTGTAATTCACTAGAACCAGACTTAAAAGCAAAGATTCAAAAAGTT
CTTGAAGTAGAGTTCATGTCATCTGAAGAAGATAAATCTGACGGGGAGGT
TGACCATTTCGAGACGCGACCTCTAAGATGGCGCAGTTTGGAATGTGACC
GACATTTCGAAATGCTAGATAAAACGGCAATAAGAAAAATGTCATCCAAA
GCCCGTCGACAAACGGTTATCAGAAAAATGGGCCCATATAGCAGTCGACC
AGCACCACAATGTACCGAACAAAACAGTTGGGCCATACGTCAGAAATAAA
AACGTGACAAGCGGAGAGCGACTTTGAGTGGGTGTAATTCACTAGAACCA
GACTTAAAAGCAAAGATTCAAAAAGTTCTTGAAGTAGAGTTCATGTCATC
TGAAGAAGATAAATCTGACGGGGAGGTTGACCATTTCGAGACGCGACCTC
TAAGATGGCGCAGTTTGGAATGTGACCGACATTTCGAAATGCTAGATAAA
ACGGCAATAAGAAAAATGTCATCCAAAGCCCGTCGACAAACGGTTATCAG
AAAAATGGGCCCATATAGCAGTCGACCAGCACCACAATGTACCGAACAAA
ACAGTTGGGCCATACGTCAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000446_pilon | genome | sc0000446_pilon:108622..113054 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-738:328 |
| Aaloc | 316-411:1467 |
| Aaloc | 223-312:1688 |
| Aaloc | 154-219:2205 |
| Aaloc | 28-153:2546 |
| Aaloc | 1-24:4434 |
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