|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:12518..17277+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041710 ID=XLOC_041710|Name=XLOC_041710|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4760bp|location=Sequence derived from alignment at sc0000006_pilon:12518..17277+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGCAAATAAAAATAACTTAAAGATTGCTACCTTACTGAAAAACGAGAT
GTCAGAAAAGAATGATGGGAAAAGTGAGAGAGGTTTACTGGCTAGAACAG
CAACTTATACTTCTAAAAAAGCTAGAAGAGCACAAACCAAGGTATTTGTA
ATTGTTTTTCAAACATTTAATGGTTTTGAGTAGGTCAAAATAGTCCTAAA
CTCAAATCAAAAATCAAACAAAAACTTTTATCAAGGATACAACACATCCG
ATAAATCCTGCATAGTGATTAACTAGCCAAGCTTTCATTTTTAAGATGCT
GGGTATTTTTAAGCACTTTTTTACCACTGTTATGTGTTATCTGTCATGGT
GTACTAAAAGTCAATTTTCAAACCGATACCAAAAAGGTGGTAAGGAAAAG
TGCTTAGAAAATACCCAGACAGTGATATATTGTTAATGGCATTTATACTT
TTCTCCTCTTTTTGCATGCTGCAATTACGCACAAAATTTCTTTGACAAAT
ATAAATTTTTAAGTAATTTAAAAGAGAATTGGGGTGTATCAAATGTATTT
TCCTGCACTCCTAGAATCTTCTTCATTGTGATTTATAGAAATATTATAAT
CAAGTTTTGTTCTTTGTTTCAGCTGAAACAACGTGTTGGCAAAGGGGATG
AAACAAAAGATGAAGTCTTCGATGAATTTGTATTCAACTTCAATAAGCAA
CAGGCTAGTTAAAATATGTTATTAGGATAAACAAAGATTTACGTCTACTT
ACTGTGATGATATTTTTTCTTTCAAAAATTGTTATTTCTTAATCTAGCTA
CTAATTAAGAGGTTTTGGAATTGATGAAATTGAATAATGCTAGCTTTTAA
GCTGCTGAGTTGAAATAATTACATATTAGCAATGGTTTTTTATTCAGGCA
TCAGCAACAAGACTACACTCGGAGCTAAAAAATTACATGCGGTGTATTAC
TGGTAAAATTTGTTTAATATTCACCCTAATTTTTTAAAACAAGATTTTTT
ATTACATAGACCCTTAAATCAAGTTTATACCTTAAATGAAGAAATTTTGG
CTGGTAATTTGATTTAACGAATGGCCAAATAAAGTCTTTTAAAAGAAGGA
ATTTAATTTGGTTTTCTGGGTAAAAGTCTTTCAAAAACCTGTATGTATTT
GAAAAGATTATATTTGCATTTCTCTGTTTGAGCTTGCTCCCCTTGTATGA
AAATGGCCAGGCAGAGAAACTTAATTTCGTGGATTTTGGATAAATTACCA
GATTTTCTTTCTGTCAAAATTTCTTCTTTCAACTCAAGCTAGAAGTCTGA
TCCTAATTGGTTTGATTTGTTCTTCTTTCTATTTTCAATGTCAATTTAGC
TGTATGTATGTTTCAATTTTACCTGAAATAATTGTTAAAAGTAGTGTTTT
TGAAAGCTTTTTGCAACCTTCTTTGATTCATTTTCCAGCTATGCAAGTTG
CTCATACAAATTTTGGGGAGGCTGTGAAGGAAGTGTATGAGTCAGATTGG
AGTTGTCGTCCAAAAATGGTTGATTATTTTAAGGTAACTTTACATTAATT
TGAAATTGTTGATGTGCAACTGACTAACAAAACTTCTGTGGTTCACTGGC
AACATTTTACTGCATATTATAGTGTGCTATAGCACAATATTTACACTGGT
TCACATTTACTGCCCATTTTACTATTCTATTTTTTTTGGACCTACCCCGG
TGGGGTGGAGGTCCTATAAATTAACATCTGTCCATTCGTCCGTCCGTCCG
TTCATTACCAACTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTT
TGCAGAAAGATGCATAACTATAAACCCTCGAATGTGATGGAGCCCAATTT
TTGGGCAAATTTGGGCCAAAAAACGGCTAAAAATGGGTTTTTAGGACTTT
GTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTACATGAAAGTAGGG
TACCATCATAGGTAAAAGATGGCTCAAGCAGATTTATGCAAAAAGTTTTT
GTTGGCTCAAAAAATGCATGTTTATCTATAAGAATCACTATTAATAAGCA
TACATCAATGTTCTTAGTCAAATTACTGAATTTCTTTTATGAGATAGATA
TTTCTTTTGCTCATGAGGCAATTACTTTTTTATGTTCTGGTTTACAGAAT
CGCCGACGTTTTTTTTTTTGCAAAAATAAAATAAAAATAAAATTGGATTT
CACAAATATTTTATTTATTTATGCTCTTCCTTGTACTAAACAGCCATAAA
TAGGAAACTTTATAGAAAATTACATTTTATAAAAGCAAGAAGGGCAAGTA
AAATGGTCAGTGTCCAGGTCTTTAATAACTTAAACACAATTTCCCTACTA
AAAACGTTCTTGAATGTATGTAAGTTTTCTCAAAACATATTTTTTTAATT
TTTTACAACATTAAAGTTTGAAAAGAGCAATTTTTTTTTTCCATCCTTCG
GTCCAAAAGATCATCTCCAAATGTCCGTAAAAACCAGAAAATAAAAAAGT
AATTGCCTGAGGGCTTACTTTTAAAGAATATGTGTGTTTAGACATGAAAT
TTTGGCTGCTTGATGTGTTTTTATAGAAAAACTGGGCAATTTCGATATTT
TTTTATAAGCACATTATCAATTACTTAGGTATTAGCTCTTTTTGAGATTG
GTTCTTTCATTCTTTATGATTTTTTGCACAAAGATGCATAACTACCGGGT
GCGCCACAAAAAAGTTTCTCTCTTTAAAAAGTTTTTTTTTTGAAGTCTGA
AAATTTTAAAAGAACCATTCCTATTTCATTGGAAAGAAGAAAGATAAACT
AAAATTTTGATAGGTCATCGTTTAAATTCAGTTCATTAGATCGAAAGTTA
TGCTCAGTTGAATAAAAAAATAACTTTCTGAAAGTGGTCAAGAACGTTAA
AACTCGACCTATCAAATTATAAACAGAAGCATAATTACATGGCGCATCAT
TATTTTCGTTTCAGCCATTAAAAATGATAATTAGCTGTCTAAATGACCTT
TTGTTATATAAAGGAAGGTTTAATTTCAATAAAAAGAAGAAAATTCGTCG
AAAAAAGCCAAAAAATCTGATAAAATTCATGAAAATACATCAAATATGTG
TTTCGAGGTACATCCATCCTTACAAAGACTTTATCCAGTCTAGAACCAGA
AAATTTTCGTAAAATTAAATTAAAGTGATTTTGATGAAGATTTTAAACCC
TTTTGACCCATCAGTTTCAAATTTTATGTATTTAATTACTGAAAAATGCT
CTTAATCACGTTAAAGGCTATTACGATTGCCAATTTTAAAATAAAAATTT
GATAAGTCGATTTTTAACATTTTCGAGCACTTTCTAAAAGTAAATTTTTT
GTTCAATTGAGCATAACTTTTAATGTAATCAGATGTAATAAATCGAATTT
GGTAAATAACCCATCAAATTTAAGTTTATCTTCTTCTTTCCCATGAAATA
GGAATGGTTCTTTTAAAATGTTTAGATTTTGAAAAAATTAGTTTCAAAGA
GAGAAACTTTTTTGTGGCGCGCCCGGTATAAACCCTCGAATGTGACGGAG
CTCGATTTTTGAGGGGAAAAATTTGGGTAAGTTTCAGCTAAAAACGGCTA
AAAAAGGGTATTTTGGATTTGTGAAATATTGGATATCGTTGGTTTGTTTT
CAGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTCT
AAAAAAATAATTTTTCAGCTCAAAAAACGCATCTTTATCTATAAGAATCA
CTATTAGTAAGCATACATCAATGTTCTTAGCAAAATTATTGAACTTTTTG
ATGAGATGGATGATTTTTTGCTCACGAAGTCTTCAATATGAAAGAGTATT
TTAAGAGCTTGAAATTTTGGTTTCTAAACGTTTTTTTATAAGAAACAAAC
GACTAATTTTAATAGATCGTTTTACTATTTGTGTTCTGAATGATTATTTA
ATTGTCACGCTCATGTAGATATTAATTATATATGTGTTAAATGCATAACC
AGGTAGGTCCATAAAAGTATCACTTTTTTCTTGTAAAAGTATATTAGATT
TCCAACCACTTTTGTTTTCTCGATCAGTTCAATATTAATAACAACAATCA
ATCAATATTGCTTGAGGACTGCCCTTATAAATTTTCCAAAATAAAGATTC
CCTAATAATAGCATATAACTACTTATAAAGTTAGCTCATCTCTTAATTTT
AACAATTAAAATAATGTGCTTCCAACTCATCCTTTATTACCAATCTCTAT
GTCAATAGGAATATGACTGCAACTGGACAAAACTAAGGCACCGTGTTTCT
GAAGAAGTTCTTGAGCCACTTACGTCCTACCTCAAACCCTTTCCAGATGT
CAAGGTGAGTTTGTCAAACTTATTTATCTTTTTGACTTGACTGTAATGTG
ATTTAAAGTGACATTGCCCTAATTCAGCGTAATAATTTTTCTGTTTATAG
ACGAAATCCGTTCAGTTGAGATACAAATACACTATCATCATCATTGCCAT
TCAAAAGAGGATTTTGGTTCAAATGACCCATTCTAATCCTAAAGTTAACA
GTCGAGACTCTTAGTTACAACACTGCTAATAAGTTTCAAATTTGATCTAG
GTTGAAATTCTTCAAATACAAAAGCGCTGTTACTCTCCAAAAATATGTTC
ACAAAATAAAGGCTCTAATTTTGTCTCTGATTTTATCATCATTTTAGACA
AAAATCAGCAAAAGAGCAAGAAAATTGGTAGACTATGATCATTCAAGGCA
TGCAGTTGAC Coding sequence (CDS) from alignment at sc0000006_pilon:12518..17277+ >XLOC_041710 ID=XLOC_041710|Name=XLOC_041710|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000006_pilon:12518..17277+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAGCAAATAAAAATAACTTAAAGATTGCTACCTTACTGAAAAACGAGAT
GTCAGAAAAGAATGATGGGAAAAGTGAGAGAGGTTTACTGGCTAGAACAG
CAACTTATACTTCTAAAAAAGCTAGAAGAGCACAAACCAAGGAAGCAAAT
AAAAATAACTTAAAGATTGCTACCTTACTGAAAAACGAGATGTCAGAAAA
GAATGATGGGAAAAGTGAGAGAGGTTTACTGGCTAGAACAGCAACTTATA
CTTCTAAAAAAGCTAGAAGAGCACAAACCAAGCTGAAACAACGTGTTGGC
AAAGGGGATGAAACAAAAGATGAAGTCTTCGATGAATTTGTATTCAACTT
CAATAAGCAACAGCTGAAACAACGTGTTGGCAAAGGGGATGAAACAAAAG
ATGAAGTCTTCGATGAATTTGTATTCAACTTCAATAAGCAACAGGCATCA
GCAACAAGACTACACTCGGAGCTAAAAAATTACATGCGGTGTATTACTGG
CATCAGCAACAAGACTACACTCGGAGCTAAAAAATTACATGCGGTGTATT
ACTGCTATGCAAGTTGCTCATACAAATTTTGGGGAGGCTGTGAAGGAAGT
GTATGAGTCAGATTGGAGTTGTCGTCCAAAAATGGTTGATTATTTTAAGC
TATGCAAGTTGCTCATACAAATTTTGGGGAGGCTGTGAAGGAAGTGTATG
AGTCAGATTGGAGTTGTCGTCCAAAAATGGTTGATTATTTTAAGGAATAT
GACTGCAACTGGACAAAACTAAGGCACCGTGTTTCTGAAGAAGTTCTTGA
GCCACTTACGTCCTACCTCAAACCCTTTCCAGATGTCAAGGAATATGACT
GCAACTGGACAAAACTAAGGCACCGTGTTTCTGAAGAAGTTCTTGAGCCA
CTTACGTCCTACCTCAAACCCTTTCCAGATGTCAAGACAAAAATCAGCAA
AAGAGCAAGAAAATTGGTAGACTATGATCATTCAAGGCATGCAGTTGACA
CAAAAATCAGCAAAAGAGCAAGAAAATTGGTAGACTATGATCATTCAAGG
CATGCAGTTGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:12518..17277 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 469-531:4698 |
| Aaloc | 373-468:4259 |
| Aaloc | 280-372:1441 |
| Aaloc | 223-276:898 |
| Aaloc | 142-222:623 |
| Aaloc | 1-141:1 |
|
