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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:30146..33486+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041708 ID=XLOC_041708|Name=XLOC_041708|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3341bp|location=Sequence derived from alignment at sc0000006_pilon:30146..33486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAGTTTGCAAAAGCTACTGACAGGAGAGGTAACGtttttagaga
tcactttctgtttggattttctttttaacttgttttttaatATGACATGA
CTACATATGATTTTGAAACGTGTAACGAATTTATCTTTAGGATGTTGTAG
CAAATTTTACCTCTCTCAAACAGGCGACTACCTTTGCTGACCGACGGGGG
TGTGCTGCTAAGGTTTGAAAAATCGACTCTACATGGGACtcgttttttga
atattttgccaaaaattggggaaagaaaaacctaaataagaaagaaattc
caaaattatctcaaaattttccacttttttcccAATcccccaaaaaggta
ccctacgaaGGATTAATTTTCTATTTAGGTATTGTTGTGACTCTACAGAC
TCCTGGacgtgaaaaaaggtaccctgaccagcggcacatcctcgtacccc
tttttgcccaagtGCCCACCACCCGATCCTTTAAACCATAGCAGACAGTG
GAGATATTTTCAACGTTGTTTCTGCATGTCATAATTCTACATCCTTTATA
TtggactcttccagaaaaaatctgtTCATGGGTGAAAGAAAGTCCTAACT
GTCCAAGGGATAAATCtgcgatgtccaggggtaaactttggtgtccaggg
ggttaaattgATGAGTGTCCATGGggtggaaaatgaaaatgtccaggggt
aattcattgaaaaaataatatatcctccacccccaatgaacggatttttt
ctggaagagcccattgcacGATTGCACAGATAATAcagttttaaaaatca
tataCAGCATGAACAAGCAAGTTCTGTCATTGCTACGTCTATTTACTTTA
TCTGTTCCAAATTTTAAAGCATATAAGATAATTGTTGCTTAACTTTAGTA
AACAGAATCCATATCTCTCAATATTCACAACAGCTAAGTTGCAATATATG
TTTGTCCAACGACAAGTTGAACTTTAGAATAAATTgcttcatgttttttt
tatagatCGCTTCTCAGCTGCTTCCGAAAAATCGACAGAAACCGAAAGTG
GACAAATCGTATACCGTAAAATATCGAACAACAAAAAccctgaatctgaa
aaattaTCGATAACAGCCACGACAACTTCTTATATCACCGACGACTCCCA
GACTGGTGAATTggagaaagatttttcaatagATGATGATTCTTTGAAGC
CAGGATCAGATACTGACTCAGCATTTTCTGTTGAGCAAATCCCTACCGAA
GAGCTTTTATACATTCTTGGTCCATATCGTCTGTACAGTACTATTAACGA
GGAAGAGAGCATCGATCAACTCAATAATATCGATTACAACGAGAATGTAA
TTATATCGGATATCAAATTATCGAGACGCCAACAACATAGCCGAGAAAAT
AGTTTCGAGTATTTTCCACCTAAAACCACATGTTACGCTGTGGGTGgtaa
aaacaaaccaaaaaagaaaacagacttaaatttccaactgaaatttgata
aacctaacaaacaaaaaacaaaatccgAAAGTTCCGATCTTAGCCCGATT
GATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAGTGAAAAAAGAACC
AAAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCGTTTAAGGACCGCA
TTATTTCACCTTTGatgaaaaaaagattcaatAAAAGATCAGCAAGCGAA
TCGAAATTatcgaaaatttccaaatcgATTGAATCGGAAGAATCGATACA
ACGAAGTGCAACTGTAGGGAACACAAGCAATATTGCTAGATCACCAATCG
ATAATAACACGAATTTCAAACgatttgacgattttcgaaaacatatCAAT
CGACAAACTGTTAAAAATCGACATCCTAGTAGTCAATCATCGACAAAATC
TTCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTACCAGAGAACCTGA
CATTAAATAGACTTGTGGATGAAAACAACGATACAGTTTTCGAAGATCAA
TCCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAAGCGATATCAACGA
TATGAAAGGACACCGACAACAACGTCAGAAATATTACCGTAAAAAGGCAA
ATTCACCGCATCCCAATACTCCTTTGCGGACGGCGTCTCCAGGCTCTTCA
GTCGATTCCCAGTACGGTGGAAGTACATCAAGTTTATCAACGGTCAGTTA
TCAATCAATTAGCACCACGGATGTGTCCTGCTTACCTGATAAATTGCTCA
TCCGTATCTTCACATATCTCGATACAAGTGACGTATgccgtttatcaaga
gtttgTCGCAGGTGGAGCGAATtatatttatcagaaaaactATGGGAACA
TATCAAAGTTACGAACATGACTAGTCTGGATATTGATTCGACATTGAATG
TAATGTTACAGAGGCTTGCGTATACGACTTCTTGCTTAAATATTCGTCAA
ATGAAACTAGATGGATGTAAGGAGCTCACAGATGAAGGAATTCAAACTAT
GGCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATTGCATCATGTGATC
AAGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAACTGCCCTAACTTA
GCATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGAGTTTCTCAAACCG
TTCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAGTTGAAATATTTGG
ATTTGAGCTCATGCTCTTGTTTCACTGATAGCGATATTGAAATTTTACTC
GGACGAGCTCCTTCACTCGAATATCTTTATTTACGACTATGCGATTCCAT
TTCTAACATTGGTATTGAAACAATAGCTAGACGGTGTCCTAATTTAAAGG
AGATTAGTCTTAACGATTGTGTTAATATCACTGACCATGGCGTGTTGAAG
TTACTAGATTCCTGTCATAATTTACGATATGTCAGTCTCGCAAAATGTCC
CATTACAAATATGGTTTTGGAACAAATTGCATCATCGCCAAATAATTTAT
TGAGACATTTAAACCTTTACGATTGTGAATATATTACTGATATTGCTATC
ATGAAATTGTCTGCATCATGTCCTAGACTACGCTCTCTTGATATTGGAAA
ATGTAGAAAATTAACGGACGCTTCGTTGTACGGACTGTCTCGTTGTACAT
TGTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGTTACAGATGCTGGG
TTGAGGAAATTAGCCACTATTTGTAAGAATCTGCGACATCTTGATGTTAG
AGACTGTTTATTCTCACCAGAGACTTACGAATATGTTCGACTTCGTTGCC
CGTTGTGTGATATACAACGCTCGTATATACATGAATGCTAA Coding sequence (CDS) from alignment at sc0000006_pilon:30146..33486+ >XLOC_041708 ID=XLOC_041708|Name=XLOC_041708|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4740bp|location=Sequence derived from alignment at sc0000006_pilon:30146..33486+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAAGTTTGCAAAAGCTACTGACAGGAGAGATGTTGAAGTTTGCAA
AAGCTACTGACAGGAGAGatCGCTTCTCAGCTGCTTCCGAAAAATCGACA
GAAACCGAAAGTGGACAAATCGTATACCGTAAAATATCGAACAACAAAAA
ccctgaatctgaaaaattaTCGATAACAGCCACGACAACTTCTTATATCA
CCGACGACTCCCAGACTGGTGAATTggagaaagatttttcaatagATGAT
GATTCTTTGAAGCCAGGATCAGATACTGACTCAGCATTTTCTGTTGAGCA
AATCCCTACCGAAGAGCTTTTATACATTCTTGGTCCATATCGTCTGTACA
GTACTATTAACGAGGAAGAGAGCATCGATCAACTCAATAATATCGATTAC
AACGAGAATGTAATTATATCGGATATCAAATTATCGAGACGCCAACAACA
TAGCCGAGAAAATAGTTTCGAGTATTTTCCACCTAAAACCACATGTTACG
CTGTGGGTGgtaaaaacaaaccaaaaaagaaaacagacttaaatttccaa
ctgaaatttgataaacctaacaaacaaaaaacaaaatccgAAAGTTCCGA
TCTTAGCCCGATTGATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAG
TGAAAAAAGAACCAAAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCG
TTTAAGGACCGCATTATTTCACCTTTGatgaaaaaaagattcaatAAAAG
ATCAGCAAGCGAATCGAAATTatcgaaaatttccaaatcgATTGAATCGG
AAGAATCGATACAACGAAGTGCAACTGTAGGGAACACAAGCAATATTGCT
AGATCACCAATCGATAATAACACGAATTTCAAACgatttgacgattttcg
aaaacatatCAATCGACAAACTGTTAAAAATCGACATCCTAGTAGTCAAT
CATCGACAAAATCTTCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTA
CCAGAGAACCTGACATTAAATAGACTTGTGGATGAAAACAACGATACAGT
TTTCGAAGATCAATCCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAA
GCGATATCAACGATATGAAAGGACACCGACAACAACGTCAGAAATATTAC
CGTAAAAAGGCAAATTCACCGCATCCCAATACTCCTTTGCGGACGGCGTC
TCCAGGCTCTTCAGTCGATTCCCAGTACGGTGGAAGTACATCAAGTTTAT
CAACGGTCAGTTATCAATCAATTAGCACCACGGATGTGTCCTGCTTACCT
GATAAATTGCTCATCCGTATCTTCACATATCTCGATACAAGTGACGTATg
ccgtttatcaagagtttgTCGCAGGTGGAGCGAATtatatttatcagaaa
aactATGGGAACATATCAAAGTTACGAACATGACTAGTCTGGATATTGAT
TCGACATTGAATGTAATGTTACAGAGGCTTGCGTATACGACTTCTTGCTT
AAATATTCGTCAAATGAAACTAGATGGATGTAAGGAGCTCACAGATGAAG
GAATTCAAACTATGGCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATT
GCATCATGTGATCAAGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAA
CTGCCCTAACTTAGCATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGA
GTTTCTCAAACCGTTCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAG
TTGAAATATTTGGATTTGAGCTCATGCTCTTGTTTCACTGATAGCGATAT
TGAAATTTTACTCGGACGAGCTCCTTCACTCGAATATCTTTATTTACGAC
TATGCGATTCCATTTCTAACATTGGTATTGAAACAATAGCTAGACGGTGT
CCTAATTTAAAGGAGATTAGTCTTAACGATTGTGTTAATATCACTGACCA
TGGCGTGTTGAAGTTACTAGATTCCTGTCATAATTTACGATATGTCAGTC
TCGCAAAATGTCCCATTACAAATATGGTTTTGGAACAAATTGCATCATCG
CCAAATAATTTATTGAGACATTTAAACCTTTACGATTGTGAATATATTAC
TGATATTGCTATCATGAAATTGTCTGCATCATGTCCTAGACTACGCTCTC
TTGATATTGGAAAATGTAGAAAATTAACGGACGCTTCGTTGTACGGACTG
TCTCGTTGTACATTGTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGT
TACAGATGCTGGGTTGAGGAAATTAGCCACTATTTGTAAGAATCTGCGAC
ATCTTGATGTTAGAGACTGTTTATTCTCACCAGAGACTTACGAATATGTT
CGACTTCGTTGCCCGTTGTGTGATATACAACGCTCGTATATACATGAATG
CTAAatCGCTTCTCAGCTGCTTCCGAAAAATCGACAGAAACCGAAAGTGG
ACAAATCGTATACCGTAAAATATCGAACAACAAAAAccctgaatctgaaa
aattaTCGATAACAGCCACGACAACTTCTTATATCACCGACGACTCCCAG
ACTGGTGAATTggagaaagatttttcaatagATGATGATTCTTTGAAGCC
AGGATCAGATACTGACTCAGCATTTTCTGTTGAGCAAATCCCTACCGAAG
AGCTTTTATACATTCTTGGTCCATATCGTCTGTACAGTACTATTAACGAG
GAAGAGAGCATCGATCAACTCAATAATATCGATTACAACGAGAATGTAAT
TATATCGGATATCAAATTATCGAGACGCCAACAACATAGCCGAGAAAATA
GTTTCGAGTATTTTCCACCTAAAACCACATGTTACGCTGTGGGTGgtaaa
aacaaaccaaaaaagaaaacagacttaaatttccaactgaaatttgataa
acctaacaaacaaaaaacaaaatccgAAAGTTCCGATCTTAGCCCGATTG
ATGTTTCCGAAAATTACGCTGGAACTTCGAATGAAGTGAAAAAAGAACCA
AAGAAGAAATCCAGTGGAATCAAGAAAACACCCTCGTTTAAGGACCGCAT
TATTTCACCTTTGatgaaaaaaagattcaatAAAAGATCAGCAAGCGAAT
CGAAATTatcgaaaatttccaaatcgATTGAATCGGAAGAATCGATACAA
CGAAGTGCAACTGTAGGGAACACAAGCAATATTGCTAGATCACCAATCGA
TAATAACACGAATTTCAAACgatttgacgattttcgaaaacatatCAATC
GACAAACTGTTAAAAATCGACATCCTAGTAGTCAATCATCGACAAAATCT
TCGAACAAATCAACCGAAAGTTTTGACGAAAGTTTACCAGAGAACCTGAC
ATTAAATAGACTTGTGGATGAAAACAACGATACAGTTTTCGAAGATCAAT
CCAACTTAACGCATAGCGATTGCAGTTTTTCGGAAAGCGATATCAACGAT
ATGAAAGGACACCGACAACAACGTCAGAAATATTACCGTAAAAAGGCAAA
TTCACCGCATCCCAATACTCCTTTGCGGACGGCGTCTCCAGGCTCTTCAG
TCGATTCCCAGTACGGTGGAAGTACATCAAGTTTATCAACGGTCAGTTAT
CAATCAATTAGCACCACGGATGTGTCCTGCTTACCTGATAAATTGCTCAT
CCGTATCTTCACATATCTCGATACAAGTGACGTATgccgtttatcaagag
tttgTCGCAGGTGGAGCGAATtatatttatcagaaaaactATGGGAACAT
ATCAAAGTTACGAACATGACTAGTCTGGATATTGATTCGACATTGAATGT
AATGTTACAGAGGCTTGCGTATACGACTTCTTGCTTAAATATTCGTCAAA
TGAAACTAGATGGATGTAAGGAGCTCACAGATGAAGGAATTCAAACTATG
GCTTTAAGATGTCCCGAACTTCGCGCTCTTGAAATTGCATCATGTGATCA
AGTCACGGCCCGTGGGGTGTATAATGTACTTGTAAACTGCCCTAACTTAG
CATTCCTAAACTTATCAGGCTGTGAAGGCGTTTCGAGTTTCTCAAACCGT
TCTGATATCATAAGTTCACCGTTCAGTTTTGGCGAGTTGAAATATTTGGA
TTTGAGCTCATGCTCTTGTTTCACTGATAGCGATATTGAAATTTTACTCG
GACGAGCTCCTTCACTCGAATATCTTTATTTACGACTATGCGATTCCATT
TCTAACATTGGTATTGAAACAATAGCTAGACGGTGTCCTAATTTAAAGGA
GATTAGTCTTAACGATTGTGTTAATATCACTGACCATGGCGTGTTGAAGT
TACTAGATTCCTGTCATAATTTACGATATGTCAGTCTCGCAAAATGTCCC
ATTACAAATATGGTTTTGGAACAAATTGCATCATCGCCAAATAATTTATT
GAGACATTTAAACCTTTACGATTGTGAATATATTACTGATATTGCTATCA
TGAAATTGTCTGCATCATGTCCTAGACTACGCTCTCTTGATATTGGAAAA
TGTAGAAAATTAACGGACGCTTCGTTGTACGGACTGTCTCGTTGTACATT
GTTACGGAGATTGAACTTAAAAGGTTGTTGCAAAGTTACAGATGCTGGGT
TGAGGAAATTAGCCACTATTTGTAAGAATCTGCGACATCTTGATGTTAGA
GACTGTTTATTCTCACCAGAGACTTACGAATATGTTCGACTTCGTTGCCC
GTTGTGTGATATACAACGCTCGTATATACATGAATGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:30146..33486 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 847-2376:1812 |
| Aaloc | 37-840:1008 |
| Aaloc | 1-33:1 |
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