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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000021_pilon:355824..361758+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041686 ID=XLOC_041686|Name=XLOC_041686|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5935bp|location=Sequence derived from alignment at sc0000021_pilon:355824..361758+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATGGAATgaataaggtaaataaaattatgttGAAAGATCTTAG
AAAAATCAATATAGAAAATgctttattgtcttttttttatcCCAGACATG
TTCAATATTTTGTGGAAAAAAcactttattttctttctccCAACTCTTTT
AGATAAAAGTATGATAGGataattctttaaatatttttttttgaatcttt
tagaTTATGCCTGGTCTTTATCTGGGGAATTTTAGAGGTGAGAGAATTCA
TTGTGTTATCCCTTTCACAGAATGGCACCACTTTTCGAAGTTAAAAATTG
GAAGCAATAAGTAAGCGTACAGCCtttttttAAGGATGTCTATATTAAAC
AGGGCCCCCTGACATTCTATCCATACTTATTTTACTACTCCCTTAATACC
ATCTGGCTtgttaggggggggggtgatcAAGAAGTAATTTTGTGGAACtt
gttgaaattttcatttaaattcttgatttttctatttcagaTGCAAAAGA
CCAGAAACAGTTGGATGAGAACAAGATCACTCACATCGTGGCTATTCATG
ACCAGCCCAAACCTATCCTAGATGTATGTTATGTTTTTACTGGAATATTG
AATTATCACTTGCAGGGGGTCCTTCAAAGTCcggctaagggtcgtaaaat
gtATGTTTTCCATTTCTGAAGCGTATTAGGTGTCAAGGTTGAACATCAGT
TGCAGCGCTCCTGGTGCCTCTAGGTCCCTACTGGCGGTATCCAGTCAATC
ATTAATGTGACATACCGTACTGTAACTTGGtttaatgtcgacacccctcc
tctatttcttctttttatcagctgaattttatagaaaggttgaaactgtt
tttctttgcttagtggttagagaggaataatcctttttcaatcagtgatg
cAAGCTTTcgtattattcctgtctctaaagaagggtgtctgaattagacg
agggatgtcgatattagaccaacttacggtaccctTTCCTCAGGAATGAA
AAATTCCATCATCCTTTAccaaaagaaatcattttttaaacaaagttttt
gaatttttgatcaTTCGATTTCAGAATATCCAATACAAAAACATAGATGC
TGCTGATTCTGCTAATGAGAAATTGTAAGTATTAAAATTTTATGATATGT
AATTGAATGATTGTCTACTTTGAATGCTATTTTGACACAGAAAAATAATG
ACTATATTTCATTGTTCAATTTAGAAACATATATTTTGAAGATTGTGCGC
AATTCATCCATCGAGCAAGGTATTTAAAGCATAATCTTAAAGCAAGCttt
ttttAATCATCGATTCAGACTTGATACACTGTCAATCTGACTGTAACGTT
CAAAAATAGTTTGGTTTTTTATCGATTGCCGTCATTTTACTGGCCCTAAG
ACGACATTGCTGTATCAATTTTTGATTGAACTGTATACTTTAATTGGTTt
agttttacaaaatttaataatttaggTTTCGAATCATTaatctgattttc
aaaatttttgagagTACTTTGCATAACACTTTGATAAGAGTTTGGGAACT
ATTAGGTCAGTTGAAAACGTTGGGTACCCAATTTGGCACCCAAATTTAGC
TACTTATTTGGATACCTGGAAAAATTTGCAGACCGGAATGGAAAGCTGAA
AATTCGCTGTCACAGCCTGATTTGAAGCTGCTAAACCGTTAGAGAAGGAA
ATAAAAGTCAAGGTCAGTGCAAGAAAATGACCGAATATTCACGCGTCATG
GCTATGGTTATGGCATAttataaaggtttaaaatttgaacaaattgattt
tgaaaaatattaaatagGCACTGATACTTATTTGCAGAAGTGGTTCAATT
ATTTCGCTAGTTTGGTGCAGGCTAATATAAATTTTAATGCtaaataatcg
cttgtggttttttcATAAACTGTTGTGTTGTGTTGTTAAATCCTCGAAAA
ATCAGTTCATTTTGCATTAACAGATCCTGAGATATGAAGGAAAGTGGTCT
AAATCCATATGATGATATTTTTCCACTGCAATATAAAACAGGAGAAGATA
TTGAAAAATACGAAAACTGAAGAAAACTTGACATTCTTCGTCATACTCAG
TAGAGTTTGTTGTTACAGTCATTAtagaaaattttagagaaaCATTGTTT
TGATCTCGAAAATATACTTTGCTTACAAAAACACACTTTCAGCCTAATTG
ACTCCAATTCTTTGAATTAAGTCACATTTACTCTTACACTTTGGTGTAAG
TTTGTAATTATTAATTCCGGtcacagatatcatattccAGTACAGTAGAT
CAGTGATTCCAGTCCTTGAATTTTCAAAGCCGCAAAGCATCATGGATCCC
AGTCAACCCAGGGCAAACAGGAGAATCCCCcgtaaattttagtttaaaaa
ctcctttatttgacgtcaagttTGGTGCCTAGAGTAtaattattaatatt
ttttggatttctcAATCTAAATTTCCCCCGTAAGTGAAAATTATACAATA
TTTTCAGTGCTGATTTGCCATTTTTCTAGTACCCAAATAGGTAGCCAACG
TTTTCAACTGAcccaaaatatttcaatataaGTCTTTTAATGATTGCTTT
TGTCTTTACAGATTAGAAGGAGGCAATGTCCTGGTACATTGGTATGCATT
ATTGTTTTTCTACTATTTTTCCTTTAAGACTTATATttcacaatatttca
gaaaatccaaaaagaaatatttcacatatattCCTCCcatataagaaact
ttttattattttgtacaATTCTCTCGTGAATTTACAAATACTAGAGGCCT
AGAGAAGAAACCTTTGCGCTGAATTTCAGTTTTATCTGATTCCGTTTTAA
TGGGGAATCTTCCTTTTGctgtttttcgaaattctatAAAGTAGCTAGTA
CTTGTTCTTTAAAAACTTGGCCGTTTTAGTTTAAAATacaagcgaccgta
gtgcagagGTAGAGCATCTGATTACGGTGCataaggttgtgggttcaatc
cccagctggatcataccaaagattcccaaaatggtacttgattcCTCTAT
GCTTGATGCTCAGAAATTACGAGAAGGGTCAAGGGTAAGTTGACCAATCC
AGGGCGAAAGAATGGCATCctctcctaccttcgggtagatagctatcggg
tcggctccgactgcggtcgcaaacttacttattaaagtaaaaataataag
CTTCGTTTTCTCTACAGCATAGCTGGTATATCTCGTTCGACCACAATCTG
TTGTGCTTACATCATGATCATCTCTGGTGTTCACTGGAGTGACGCCATCT
TGGCATGTCGTAAAGCAAGGTCACAGGTCAACCCAAATTATGGTTTCCAA
AGACAACTGCAAGAGTTTGAAGCGAAAATCACAAAGGTAGAAATGATTTA
TAGAAATTTAGACTTTCCATTAAATATCTTCTTAATTGTTGGATCTGTCA
GGCGTTACTGTAAATTGACCGTAGTCCTTTCATTTGGCCGTTCGTTcctc
tgttaccagcttttctcggtgtacagccccaagatgtgaaacctgcccca
agatgtgaaacctgccccaagatgtgacccgtTTGCCCCAAGATATGACC
CCACTTGCCCAAAGATGCGACCCCAAAAAGCTGCCCTAAGATGTGACCCA
cttgccccaagatgtgactGGGAAATTATAAGTTTTGGTAAATGTActag
tggagttgatggttctggtgaatctgctgGTGGAATTGAAGGTTCTGGTG
AACttgctggtggagttgatggttctggtgattctgctggtggagttgat
ggttctggtgaaacTACTGGtagaattgatggttctggtgaaattgctgg
tggaattgatggttctggtgaaatTGCTGGttgaattgatggttctggtg
aatatactggtggagttgatggttctggtgaatctgctgATGGATTTAAT
GGATCTGGTGAATCTGCTGGTGGgtttgatggttctggtgaacttgctgg
tggagttgatggctCTGGTGAATATGCTGCCGGAGTTGATGGTTTCGGTG
AATCTGCTGGTggatttgatggttctggtgaaacTACTGGtagaattgat
ggttctggtgaactTGCTGacggtggagttgatggttctggtgattcTGC
TATTGAAGGTGATCGTTTAGGTGAATATACTGgttgagttgatggttctg
gtgaatctgctgatggagttgatggttctgatgAATCTGCCGGTggattt
gatggttctggtgaatctgctAATGGatttgatggatctggtgaatctgc
tagtggagttgatggttttggagaATCTGCtgatggagttgatggttttg
gttaATCAGCTGGTGGataatatttcaactttgaggaccttatttttggt
gaataaaaaaaacatcttgaaaaactttttgcgtCTTGTCGTGTATTTCT
AGACCAACTAAAAATAGATATATGGTGTATTTTTAGCCaaactaaaaata
gatttatGGTGCATTTTTAGATGAACTGAAAATAGATttgcagaaaaatt
ttttaaagcatCTTTGACTCAGAATCTTCAAACTGGTGGTTTTTGCCCAT
TTTCTCATCAGAGTTTCTCAGACAAACTGCCATAACTTGTGATACATATA
TTTAGAaacattttcctcaaaatttcaaatacagtagactctcgttAATT
TAAATCCTCAAaggggaaaaattttgattgaattacagagagttcAAACG
ATATAAAATCACGATAATtcgaattttgaagttttttgacatgaatgatc
gaattagagaaaacttatcatttttacaaatattttaactCGAAAGTGTG
TACACATTCTACTTTCCAGGAAAAGTTTTGGGGGCCATTCATAACAAAGT
GAGAAAAATAGTGTAGTAGTTTGTCCATAAGTAAATTTTCACATTTCCTT
TCACATAactctttgaaaattctttgcatctttggattcaaaatttgtgA
TTGTTAACCTATAAAAGCTTCGAAAATGCCTGACAGTCCACAGAAAATCG
AACTAGGAAGACACGATTGCTGAAAAAACAAAAGCAGACCAGCAgaatca
ccagaaccatcaactccatcaGCAGAATCACCAGATCCATTAAATCCATC
Atcagattcaccagaaccatcaactccaccagcaatttcaccagaaccat
caattctaCCAGTAGtttcaccagaatcatcaacttCACCAGCAAGTTCA
CCAGAACCTTCAATTCCACCAGCagattcaccaaaaccaccaaatCCACC
AGTATATTCACCAGAACTATCAACTCCACCAGTACATTTACCAAAACTTA
TAATTTCCCAGTGATTTTTTctggggtcacatcttggggcagcTTTtcgg
gtcacatcttggggcaaaCGGGTCTCATCTTAGGGCAGGTTTCACATCTT
GGGGCAATCGGGTCACATCTTAGGGCAGGTTTCACATCTTAGGGCAGGGG
TCACATCTTGGAGCTGTACACTCGGGATtagattttttgatattttgtac
aaagatgTAGAATTTTGAGTCCCAAAATATAACCAATCCTGAACCTGATA
AATTCCTCCCACTTCTTAAGGTCCTTGAGCCTCCTTCTAAATGTTTCGCT
AAGCaaaaaaaTAGGTCAACGCTCTGTGGTGGGTTGCCCATGAAATCAAT
CtcattggaaaaaataaatcttttttttttcacccaGGTTCGTCAAGACC
TGATACAGACCGTTGGTCCTCTCAACGAAGAAGACAAGAAATTCTTAACA
GAACAAATCGCGTCCTTTGACGAAACGCAGGATTTGAAATCTGAAATTGA
CAAGGACAATTTTTTAGGTACAACTTCGACTTTTGGTAGTTATGAGAGGA
AACGTGTCGATAATAATCAACTGCCTGATGAATAA Coding sequence (CDS) from alignment at sc0000021_pilon:355824..361758+ >XLOC_041686 ID=XLOC_041686|Name=XLOC_041686|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000021_pilon:355824..361758+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAATGGAATgaataagATGGGAAATGGAATgaataagaTTATGCC
TGGTCTTTATCTGGGGAATTTTAGAGaTTATGCCTGGTCTTTATCTGGGG
AATTTTAGAGaTGCAAAAGACCAGAAACAGTTGGATGAGAACAAGATCAC
TCACATCGTGGCTATTCATGACCAGCCCAAACCTATCCTAGATaTGCAAA
AGACCAGAAACAGTTGGATGAGAACAAGATCACTCACATCGTGGCTATTC
ATGACCAGCCCAAACCTATCCTAGATAATATCCAATACAAAAACATAGAT
GCTGCTGATTCTGCTAATGAGAAATTAATATCCAATACAAAAACATAGAT
GCTGCTGATTCTGCTAATGAGAAATTAAACATATATTTTGAAGATTGTGC
GCAATTCATCCATCGAGCAAGAAACATATATTTTGAAGATTGTGCGCAAT
TCATCCATCGAGCAAGATTAGAAGGAGGCAATGTCCTGGTACATTGATTA
GAAGGAGGCAATGTCCTGGTACATTGCATAGCTGGTATATCTCGTTCGAC
CACAATCTGTTGTGCTTACATCATGATCATCTCTGGTGTTCACTGGAGTG
ACGCCATCTTGGCATGTCGTAAAGCAAGGTCACAGGTCAACCCAAATTAT
GGTTTCCAAAGACAACTGCAAGAGTTTGAAGCGAAAATCACAAAGCATAG
CTGGTATATCTCGTTCGACCACAATCTGTTGTGCTTACATCATGATCATC
TCTGGTGTTCACTGGAGTGACGCCATCTTGGCATGTCGTAAAGCAAGGTC
ACAGGTCAACCCAAATTATGGTTTCCAAAGACAACTGCAAGAGTTTGAAG
CGAAAATCACAAAGGTTCGTCAAGACCTGATACAGACCGTTGGTCCTCTC
AACGAAGAAGACAAGAAATTCTTAACAGAACAAATCGCGTCCTTTGACGA
AACGCAGGATTTGAAATCTGAAATTGACAAGGACAATTTTTTAGGTACAA
CTTCGACTTTTGGTAGTTATGAGAGGAAACGTGTCGATAATAATCAACTG
CCTGATGAATAAGTTCGTCAAGACCTGATACAGACCGTTGGTCCTCTCAA
CGAAGAAGACAAGAAATTCTTAACAGAACAAATCGCGTCCTTTGACGAAA
CGCAGGATTTGAAATCTGAAATTGACAAGGACAATTTTTTAGGTACAACT
TCGACTTTTGGTAGTTATGAGAGGAAACGTGTCGATAATAATCAACTGCC
TGATGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021_pilon | genome | sc0000021_pilon:355824..361758 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 433-630:5738 |
| Aaloc | 265-432:3219 |
| Aaloc | 235-261:2613 |
| Aaloc | 190-231:1226 |
| Aaloc | 139-186:1075 |
| Aaloc | 58-138:493 |
| Aaloc | 22-54:204 |
| Aaloc | 1-21:1 |
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