XLOC_041673 (mRNA) -

Overview
NameXLOC_041673
Unique NameXLOC_041673
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:2061252..2062316+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041673 ID=XLOC_041673|Name=XLOC_041673|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1065bp|location=Sequence derived from alignment at sc0000006_pilon:2061252..2062316+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTGGCAACGATTGGTGAATCAACAACGTCCCTTGATATCTGGAC ACTTTCCAAGAACGGTATATGTAACGCTTGTCTGGACGGAAGATACGAAA GTTGCTACTGTGTGGTTGACAAgaaaaaaaagtcgaaaaaatcaGCTTCC AAAGTGGCGGCCGACACGGTGACACGCGAGAATCTTATTTCCTCTGGTAG TTATTCTCACAGTTGTTCTGGTGAATTTATATCGGATAACGAATTTGAGG ATTATGTTGATTTAGAAGGTTCTTTACCTGTATCATCGACTGATTGGAAT ACAATTGATACTCTATTAACGCCCACCAAGGAACGCCAAGAGATGCCGAG TTCAGAATCAACCTTGACAGCTTTGGAGATGTGTTCTCCGGAGAAAAAAC TGCAAATGCAGATGACGTTTGTTGATTCTGAAAGTGATAAAGAAAGTATA CCAGATGTCGAAGTATATTATGAAGATAACCAAGATTTCTTGTTTCGAAA AGGACAATCAATATCCAGTACTGATCTGACCGGACCTGATGCTGATGGAC GCAATATAGATTCTAGAGATTCTGGATTCGTGACTTCAGATATGTATGAA CATGACATTGAATATGTTACCGATGATGTCAGTGAGAAACGACGTGGTTC GTTGGAACCTTCCGAGATTTCACACATGATGTTGACAACGTTACAACTCC ACGAGGAAAGTGAAGAGCGTGAACGAAAAGAACGCGAATCACAATCGTAC CAACAAAACGAATACAAAGCTAATCTGTTCAAGAAAAGTTTCGAAGAATT AACAATTTTGAAAGAAGAACTTGAGATAAGAGTAGCAGAGATTAATTTGG AATTGGTGCAAGAATTATCGTTGAGAGATGAACTACATTCGCACCATCAA GCTCTACTCATGAACGCTGATGATATTGCCAAATCAGCGCCCTGCCCCAA TAATAACGACGTCACTCCTACGAACTCTCCTTCCAAAACGGTTTCGGCCA CGGCAAATTCGAACTCAACAGCTACTGATAACAGAGCTAAAAGAAGATCT TGGTGGTTCCGGTGA

Coding sequence (CDS) from alignment at sc0000006_pilon:2061252..2062316+

>XLOC_041673 ID=XLOC_041673|Name=XLOC_041673|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000006_pilon:2061252..2062316+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTGGCAACGATTGGTGAATCAACAACGTCCCTTGATATCTGGAC
ACTTTCCAAGAACGGTATATGTAACGCTTGTCTGGACGGAAGATACGAAA
GTTGCTACTGTGTGGTTGACAAgaaaaaaaagtcgaaaaaatcaGCTTCC
AAAGTGGCGGCCGACACGGTGACACGCGAGAATCTTATTTCCTCTGGTAG
TTATTCTCACAGTTGTTCTGGTGAATTTATATCGGATAACGAATTTGAGG
ATTATGTTGATTTAGAAGGTTCTTTACCTGTATCATCGACTGATTGGAAT
ACAATTGATACTCTATTAACGCCCACCAAGGAACGCCAAGAGATGCCGAG
TTCAGAATCAACCTTGACAGCTTTGGAGATGTGTTCTCCGGAGAAAAAAC
TGCAAATGCAGATGACGTTTGTTGATTCTGAAAGTGATAAAGAAAGTATA
CCAGATGTCGAAGTATATTATGAAGATAACCAAGATTTCTTGTTTCGAAA
AGGACAATCAATATCCAGTACTGATCTGACCGGACCTGATGCTGATGGAC
GCAATATAGATTCTAGAGATTCTGGATTCGTGACTTCAGATATGTATGAA
CATGACATTGAATATGTTACCGATGATGTCAGTGAGAAACGACGTGGTTC
GTTGGAACCTTCCGAGATTTCACACATGATGTTGACAACGTTACAACTCC
ACGAGGAAAGTGAAGAGCGTGAACGAAAAGAACGCGAATCACAATCGTAC
CAACAAAACGAATACAAAGCTAATCTGTTCAAGAAAAGTTTCGAAGAATT
AACAATTTTGAAAGAAGAACTTGAGATAAGAGTAGCAGAGATTAATTTGG
AATTGGTGCAAGAATTATCGTTGAGAGATGAACTACATTCGCACCATCAA
GCTCTACTCATGAACGCTGATGATATTGCCAAATCAGCGCCCTGCCCCAA
TAATAACGACGTCACTCCTACGAACTCTCCTTCCAAAACGGTTTCGGCCA
CGGCAAATTCGAACTCAACAGCTACTGATAACAGAGCTAAAAGAAGATCT
TGGTGGTTCCGGTGAATGGCTTTGGCAACGATTGGTGAATCAACAACGTC
CCTTGATATCTGGACACTTTCCAAGAACGGTATATGTAACGCTTGTCTGG
ACGGAAGATACGAAAGTTGCTACTGTGTGGTTGACAAgaaaaaaaagtcg
aaaaaatcaGCTTCCAAAGTGGCGGCCGACACGGTGACACGCGAGAATCT
TATTTCCTCTGGTAGTTATTCTCACAGTTGTTCTGGTGAATTTATATCGG
ATAACGAATTTGAGGATTATGTTGATTTAGAAGGTTCTTTACCTGTATCA
TCGACTGATTGGAATACAATTGATACTCTATTAACGCCCACCAAGGAACG
CCAAGAGATGCCGAGTTCAGAATCAACCTTGACAGCTTTGGAGATGTGTT
CTCCGGAGAAAAAACTGCAAATGCAGATGACGTTTGTTGATTCTGAAAGT
GATAAAGAAAGTATACCAGATGTCGAAGTATATTATGAAGATAACCAAGA
TTTCTTGTTTCGAAAAGGACAATCAATATCCAGTACTGATCTGACCGGAC
CTGATGCTGATGGACGCAATATAGATTCTAGAGATTCTGGATTCGTGACT
TCAGATATGTATGAACATGACATTGAATATGTTACCGATGATGTCAGTGA
GAAACGACGTGGTTCGTTGGAACCTTCCGAGATTTCACACATGATGTTGA
CAACGTTACAACTCCACGAGGAAAGTGAAGAGCGTGAACGAAAAGAACGC
GAATCACAATCGTACCAACAAAACGAATACAAAGCTAATCTGTTCAAGAA
AAGTTTCGAAGAATTAACAATTTTGAAAGAAGAACTTGAGATAAGAGTAG
CAGAGATTAATTTGGAATTGGTGCAAGAATTATCGTTGAGAGATGAACTA
CATTCGCACCATCAAGCTCTACTCATGAACGCTGATGATATTGCCAAATC
AGCGCCCTGCCCCAATAATAACGACGTCACTCCTACGAACTCTCCTTCCA
AAACGGTTTCGGCCACGGCAAATTCGAACTCAACAGCTACTGATAACAGA
GCTAAAAGAAGATCTTGGTGGTTCCGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041673XLOC_041673-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:2061252..2062316 +
Properties
Property NameValue
Aaloc1-1065:1