XLOC_041666 (mRNA) -

Overview
NameXLOC_041666
Unique NameXLOC_041666
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:1788894..1789721-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041666 ID=XLOC_041666|Name=XLOC_041666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=828bp|location=Sequence derived from alignment at sc0000006_pilon:1788894..1789721- (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATTAAATAACAAATTTTAAGAGATGGCAATAACTCTCGAAGATGT GGTTAGTATCGTTGAAAGAGCAAAGCAAAAGCTTGATGTATTGTTCGTCT CTGTACAAATGCCTGAATCTCATGGTTTAACTCATTGTCTCATTGTACTG GGAAATATGAACAGTGCTATCAGTCGTGCTCCAAAAGACCTTTGCCATCT CCTAACCCCGGAGAAAATTTTGACTTTGAAACTTGCTGCCTTACTTCACG AAGCTGATGACCACAAGTTTTTCAAAGGAAGTGTCGATTTTGAAAATGCG AAACGGATTTGTGAAGAAGTTATCCCTGAGAATGTTGATAATAAGAAAAA AATCATTACGGATGTAGTGAAGATGATTTCCTATGTTTCTGCATCAGTTA ATGGGAACAGTGTACCGGGAGATGCCAAAGCTGACCCCACCTTTCTATGG CCACGTTATTGCGACAGGCTAGAATCTATTGGTGTGATAGGAGCTGTTAG GTGTTATCAATATAACACAGAGGTAGGGGCACCCCTGATGGTAGCATCTA CTCCTCGTCCAGCTACAGTGTCAGAACTATGGGACCAAGTCAAAGAAGAA AGATGGAAGCAGTACCAAAATGGAGGGAACAGTCAAAGTATGATGGATCA TTATTATGATAAACTTCTCCATATTGCTAAACTGGATCCAGGAGTTGTGA GAAATGATTTTCTAGTAGAGGAAGCTAATAAAAGAGTCCAACCTTTGATT GATATTTGCTTGGAATCTGGGAGGACTGGCAAAGCACCTGTAGAATCTCT AAAGAAACTTGAGAAATCGTTGACTTAA

Coding sequence (CDS) from alignment at sc0000006_pilon:1788894..1789721-

>XLOC_041666 ID=XLOC_041666|Name=XLOC_041666|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000006_pilon:1788894..1789721- (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATTAAATAACAAATTTTAAGAGATGGCAATAACTCTCGAAGATGT
GGTTAGTATCGTTGAAAGAGCAAAGCAAAAGCTTGATGTATTGTTCGTCT
CTGTACAAATGCCTGAATCTCATGGTTTAACTCATTGTCTCATTGTACTG
GGAAATATGAACAGTGCTATCAGTCGTGCTCCAAAAGACCTTTGCCATCT
CCTAACCCCGGAGAAAATTTTGACTTTGAAACTTGCTGCCTTACTTCACG
AAGCTGATGACCACAAGTTTTTCAAAGGAAGTGTCGATTTTGAAAATGCG
AAACGGATTTGTGAAGAAGTTATCCCTGAGAATGTTGATAATAAGAAAAA
AATCATTACGGATGTAGTGAAGATGATTTCCTATGTTTCTGCATCAGTTA
ATGGGAACAGTGTACCGGGAGATGCCAAAGCTGACCCCACCTTTCTATGG
CCACGTTATTGCGACAGGCTAGAATCTATTGGTGTGATAGGAGCTGTTAG
GTGTTATCAATATAACACAGAGGTAGGGGCACCCCTGATGGTAGCATCTA
CTCCTCGTCCAGCTACAGTGTCAGAACTATGGGACCAAGTCAAAGAAGAA
AGATGGAAGCAGTACCAAAATGGAGGGAACAGTCAAAGTATGATGGATCA
TTATTATGATAAACTTCTCCATATTGCTAAACTGGATCCAGGAGTTGTGA
GAAATGATTTTCTAGTAGAGGAAGCTAATAAAAGAGTCCAACCTTTGATT
GATATTTGCTTGGAATCTGGGAGGACTGGCAAAGCACCTGTAGAATCTCT
AAAGAAACTTGAGAAATCGTTGACTTAAAATAAATTAAATAACAAATTTT
AAGAGATGGCAATAACTCTCGAAGATGTGGTTAGTATCGTTGAAAGAGCA
AAGCAAAAGCTTGATGTATTGTTCGTCTCTGTACAAATGCCTGAATCTCA
TGGTTTAACTCATTGTCTCATTGTACTGGGAAATATGAACAGTGCTATCA
GTCGTGCTCCAAAAGACCTTTGCCATCTCCTAACCCCGGAGAAAATTTTG
ACTTTGAAACTTGCTGCCTTACTTCACGAAGCTGATGACCACAAGTTTTT
CAAAGGAAGTGTCGATTTTGAAAATGCGAAACGGATTTGTGAAGAAGTTA
TCCCTGAGAATGTTGATAATAAGAAAAAAATCATTACGGATGTAGTGAAG
ATGATTTCCTATGTTTCTGCATCAGTTAATGGGAACAGTGTACCGGGAGA
TGCCAAAGCTGACCCCACCTTTCTATGGCCACGTTATTGCGACAGGCTAG
AATCTATTGGTGTGATAGGAGCTGTTAGGTGTTATCAATATAACACAGAG
GTAGGGGCACCCCTGATGGTAGCATCTACTCCTCGTCCAGCTACAGTGTC
AGAACTATGGGACCAAGTCAAAGAAGAAAGATGGAAGCAGTACCAAAATG
GAGGGAACAGTCAAAGTATGATGGATCATTATTATGATAAACTTCTCCAT
ATTGCTAAACTGGATCCAGGAGTTGTGAGAAATGATTTTCTAGTAGAGGA
AGCTAATAAAAGAGTCCAACCTTTGATTGATATTTGCTTGGAATCTGGGA
GGACTGGCAAAGCACCTGTAGAATCTCTAAAGAAACTTGAGAAATCGTTG
ACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041666XLOC_041666-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:1788894..1789721 -
Properties
Property NameValue
Aaloc1-828:829