|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1138226..1141301- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041655 ID=XLOC_041655|Name=XLOC_041655|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3076bp|location=Sequence derived from alignment at sc0000038_pilon:1138226..1141301- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAAAGAAACAAAAAACATTACAAAAATTTTAAATTCTACTATAATAA
TATCAGAGGCATGACATCAAAACTAGAACAACTAACTGAAATAATACAAG
ATAACGTAAAACCAACGATGTTCTGCATAGTTGAAACCCACCTACAACAA
GACGAGGCAGTCAAGGAGATCGAGGAAAAATTTCCGGAGTACAAGATTCT
GAGAAACGACAGAACTAAAGCAGATACAGGAGGAGGGATACTGATAGCAG
TAAGAAAGGAGATCGGAAAGAATATGATAGAGGTAGATAGACAAGCGGAC
GAAGAAGAAACATTATGGGTAAAAATTGACAACAAACAAACGAAAATCCG
AATAGGAGTGATCTACGCCCCCCAAGAATCAAGAACAGACTTAGAACAAC
TTAAAAATATGTATAACAGAATACAACAACAAGTTAAAGTAGCAAAGCGG
CAAGGTGAAGAACTCCTTATATTAGGAGATTTCAACGCAAAAATATACGA
GCAAGTCACAAAAGGTGGCAAATTACTTAAAGAACTAGTCAAGGATAACG
AGATATACATTGTGAACGATGATGCAGAGGGGAAATGGACTAGAATTCAA
GGTGATGAAAAATCGACCATTGACTACGTAATGACGAACAACTATCGAAA
AGGAGGTGTCAAGATGACGATAGACGAAACTAAAGCACTAACCCCGTATT
ACATCAAAGACAAAGAGGCAAAGTACACCGATCATTGTGCAATGATTGGC
ACCGTCAACTGGAAAACAACAGCATCGGTAGAGAAAAAGAAAAAATATAT
ATCAAACATAACAGTGAAAACGAAAGCAGCGTACAAGATCGTAACAAATA
GTGAAAAACTCACATCGATAGCGACAGAAAAGTCACTACAACTTAACGAC
AGATACGAGAAATGGGAAGATGAGATCATCAAAATGAGTAAAAAATGCTT
CACAAAGTGCAAAGTGAACAAATACACCAAAACCAGCCCAAAAAGAAGAA
AACTGATGAAAAAAAGGAGGGACCTGATAAAGATAGAGAAAGGTAACGAA
ACTAACGAAAACAGCATAGAGAAAACAAGAATCAAGCTGCTAAACCAGCA
CATAGAAAGTGAAACGAAAGAAGAAAGAATGAAAACGACACGTAAAAAAG
TAGAGCAAATCGAGAAAGCGGGAGGAGTCAACAGTCCAGACTTCTGGAAG
ATCATTAAGCCAACAAAAGATAAGACACAGAAGAAAACGTCAATGATAGA
TGAACGAGGAGAGGTGAAGGAAGATCAAGAGGAGATTAAGAATGTATACA
AGCAATGGTACCAGAATCTACTGATGGCATCACCGGCAACGACAGAGGAG
GAAAGGAGATCGGAGGAGAGAGTCAATGAATGTTTTGAGATGATAAAGAG
GGAAGCAACTAAATGCGAGATAAGAGAAATATCCAGGGAAGAACTGGATA
AGGTTATAAGAAACCTCAGCACGAAAAAGGCTGAGGATTTCAGTGAAATA
AAAAATGAGTTTATAAAGTACGGAGGAGAGAAATTAAAAACGAGTCTCCT
CAAGTTATTGAATGAAATTTTATTGAAAGCTGAAATTCCAGATAGATGGA
AACATATGATTATAAAGTCAATTTATAAAAATAAAGGCAAAAGAAATGAA
ATGAAAAATCAACGGGGGATCTTTCTAACGAGCATAGTGAGCAAGATCTT
TGAGAGAATCCTTCTCAATAGAAACAAAACGACGATTGAAGAGAATATGT
CTCCTTTCCAGTGTGGTGGAAGGAGCGGCAGGGGAATTTGTGACCATCTC
TTTACGATGCGAGCACTAATTGATGACGCGAAATATTACAACAAAAATCT
TTACTTGTTCTATGGTGATTTGGAGAAATGTTTTGACAAACTCTGGCTTC
GCGATTGTATAGTGGAAGCGTGGAAGGCAGGAGTACCTGCTAACGAGGCG
ATGATCATTTTCGAAATGAACAAAGAAGCGAAAATAGTGGTAGACACGCC
ACACGGGAGAACAGCAGAGATAACAACCAAGGAGATTGTACGTCAGGGAA
CAATTTGGGGGCCAACATTATGTGCAGTATCCACAGAGAAGGTGAACAAA
GTCGGCGAAAAAGTGAGTACCTTATATTCAAATTTAAATGTAGAGTCACT
CACCTATGTAGATGATATTTGTGGAGCAGGAGGCAGAGAAACCGTCTCCA
AAACCATTGATAACTGTGCGAGGATGGAGGAAAAGAAGAGAATGACCTTT
AATGAAACTAAAAGTAACTATCAAATTTTAGAATTTGGCGAAAAAAAGAG
ATCGAGTAGAAATTAAGAAAAGGGTTAAAAAAGGCCCTATTATCAAAACC
GATAAATATAAGTACCTAGGAGATTACGTCAACAACAAAGGTACATATAA
AGATACGATCCAAAACAAGGAGAAAAAGATATACGGAATTACGAAGGCAA
TTATAAAAGATGCAGATTGTACTGGAGAAAGTTACGGAAAAGTAGTTAAC
AAGCTATACTTAACGAAGGCACTTCCATACGTGACGTCGAACATGGAAAC
TTGGAGTGTGATTTCAAAAAGTGAAATGGCAAGCATTGAAAAAATGCAAA
AAGATATGCTATTGAGAATATACGGAATGCCAAAAACAACACCGTACGAG
CCATTCCTAAGTGAATTAGGCATTTGGCCTATAAGACACTACATAAATTA
TAAAAAACTTCTACTGTTACACAACCTAATCAATTCTCCAGATGAAAGGG
TAGCAGCAAAGATTCTAAAGGCCCAAATGGAGAATGAAATACGAAATTGT
TGGTACAGTGAACTGAAAGAACGATGTGACCAATACGAAATCGACACAAC
GAGCGTGAAAGATATATCAAAAAACGAGTGGAAAAAAAGAATACGAAAAG
CCATCACGAAAAGTATTGAAAACGAAGAATGGACGAAACGAACAAAATCC
AGAAACAGTAAGGGGTTCGAAAGAAAGAAGTACTTAGACGAAACTGACAA
AGCCACAATGAGAAACATATTAAGTATGAAAGTAAATATGATAGACGTCA
AGATGAATTACAAAGGAAAGTACAGA Coding sequence (CDS) from alignment at sc0000038_pilon:1138226..1141301- >XLOC_041655 ID=XLOC_041655|Name=XLOC_041655|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6152bp|location=Sequence derived from alignment at sc0000038_pilon:1138226..1141301- (Clytia hemisphaerica_ch_hm2_pilon)
GGAAAAAGAAACAAAAAACATTACAAAAATTTTAAATTCTACTATAATAA
TATCAGAGGCATGACATCAAAACTAGAACAACTAACTGAAATAATACAAG
ATAACGTAAAACCAACGATGTTCTGCATAGTTGAAACCCACCTACAACAA
GACGAGGCAGTCAAGGAGATCGAGGAAAAATTTCCGGAGTACAAGATTCT
GAGAAACGACAGAACTAAAGCAGATACAGGAGGAGGGATACTGATAGCAG
TAAGAAAGGAGATCGGAAAGAATATGATAGAGGTAGATAGACAAGCGGAC
GAAGAAGAAACATTATGGGTAAAAATTGACAACAAACAAACGAAAATCCG
AATAGGAGTGATCTACGCCCCCCAAGAATCAAGAACAGACTTAGAACAAC
TTAAAAATATGTATAACAGAATACAACAACAAGTTAAAGTAGCAAAGCGG
CAAGGTGAAGAACTCCTTATATTAGGAGATTTCAACGCAAAAATATACGA
GCAAGTCACAAAAGGTGGCAAATTACTTAAAGAACTAGTCAAGGATAACG
AGATATACATTGTGAACGATGATGCAGAGGGGAAATGGACTAGAATTCAA
GGTGATGAAAAATCGACCATTGACTACGTAATGACGAACAACTATCGAAA
AGGAGGTGTCAAGATGACGATAGACGAAACTAAAGCACTAACCCCGTATT
ACATCAAAGACAAAGAGGCAAAGTACACCGATCATTGTGCAATGATTGGC
ACCGTCAACTGGAAAACAACAGCATCGGTAGAGAAAAAGAAAAAATATAT
ATCAAACATAACAGTGAAAACGAAAGCAGCGTACAAGATCGTAACAAATA
GTGAAAAACTCACATCGATAGCGACAGAAAAGTCACTACAACTTAACGAC
AGATACGAGAAATGGGAAGATGAGATCATCAAAATGAGTAAAAAATGCTT
CACAAAGTGCAAAGTGAACAAATACACCAAAACCAGCCCAAAAAGAAGAA
AACTGATGAAAAAAAGGAGGGACCTGATAAAGATAGAGAAAGGTAACGAA
ACTAACGAAAACAGCATAGAGAAAACAAGAATCAAGCTGCTAAACCAGCA
CATAGAAAGTGAAACGAAAGAAGAAAGAATGAAAACGACACGTAAAAAAG
TAGAGCAAATCGAGAAAGCGGGAGGAGTCAACAGTCCAGACTTCTGGAAG
ATCATTAAGCCAACAAAAGATAAGACACAGAAGAAAACGTCAATGATAGA
TGAACGAGGAGAGGTGAAGGAAGATCAAGAGGAGATTAAGAATGTATACA
AGCAATGGTACCAGAATCTACTGATGGCATCACCGGCAACGACAGAGGAG
GAAAGGAGATCGGAGGAGAGAGTCAATGAATGTTTTGAGATGATAAAGAG
GGAAGCAACTAAATGCGAGATAAGAGAAATATCCAGGGAAGAACTGGATA
AGGTTATAAGAAACCTCAGCACGAAAAAGGCTGAGGATTTCAGTGAAATA
AAAAATGAGTTTATAAAGTACGGAGGAGAGAAATTAAAAACGAGTCTCCT
CAAGTTATTGAATGAAATTTTATTGAAAGCTGAAATTCCAGATAGATGGA
AACATATGATTATAAAGTCAATTTATAAAAATAAAGGCAAAAGAAATGAA
ATGAAAAATCAACGGGGGATCTTTCTAACGAGCATAGTGAGCAAGATCTT
TGAGAGAATCCTTCTCAATAGAAACAAAACGACGATTGAAGAGAATATGT
CTCCTTTCCAGTGTGGTGGAAGGAGCGGCAGGGGAATTTGTGACCATCTC
TTTACGATGCGAGCACTAATTGATGACGCGAAATATTACAACAAAAATCT
TTACTTGTTCTATGGTGATTTGGAGAAATGTTTTGACAAACTCTGGCTTC
GCGATTGTATAGTGGAAGCGTGGAAGGCAGGAGTACCTGCTAACGAGGCG
ATGATCATTTTCGAAATGAACAAAGAAGCGAAAATAGTGGTAGACACGCC
ACACGGGAGAACAGCAGAGATAACAACCAAGGAGATTGTACGTCAGGGAA
CAATTTGGGGGCCAACATTATGTGCAGTATCCACAGAGAAGGTGAACAAA
GTCGGCGAAAAAGTGAGTACCTTATATTCAAATTTAAATGTAGAGTCACT
CACCTATGTAGATGATATTTGTGGAGCAGGAGGCAGAGAAACCGTCTCCA
AAACCATTGATAACTGTGCGAGGATGGAGGAAAAGAAGAGAATGACCTTT
AATGAAACTAAAAGTAACTATCAAATTTTAGAATTTGGCGAAAAAAAGAG
ATCGAGTAGAAATTAAGAAAAGGGTTAAAAAAGGCCCTATTATCAAAACC
GATAAATATAAGTACCTAGGAGATTACGTCAACAACAAAGGTACATATAA
AGATACGATCCAAAACAAGGAGAAAAAGATATACGGAATTACGAAGGCAA
TTATAAAAGATGCAGATTGTACTGGAGAAAGTTACGGAAAAGTAGTTAAC
AAGCTATACTTAACGAAGGCACTTCCATACGTGACGTCGAACATGGAAAC
TTGGAGTGTGATTTCAAAAAGTGAAATGGCAAGCATTGAAAAAATGCAAA
AAGATATGCTATTGAGAATATACGGAATGCCAAAAACAACACCGTACGAG
CCATTCCTAAGTGAATTAGGCATTTGGCCTATAAGACACTACATAAATTA
TAAAAAACTTCTACTGTTACACAACCTAATCAATTCTCCAGATGAAAGGG
TAGCAGCAAAGATTCTAAAGGCCCAAATGGAGAATGAAATACGAAATTGT
TGGTACAGTGAACTGAAAGAACGATGTGACCAATACGAAATCGACACAAC
GAGCGTGAAAGATATATCAAAAAACGAGTGGAAAAAAAGAATACGAAAAG
CCATCACGAAAAGTATTGAAAACGAAGAATGGACGAAACGAACAAAATCC
AGAAACAGTAAGGGGTTCGAAAGAAAGAAGTACTTAGACGAAACTGACAA
AGCCACAATGAGAAACATATTAAGTATGAAAGTAAATATGATAGACGTCA
AGATGAATTACAAAGGAAAGTACAGAGGAAAAAGAAACAAAAAACATTAC
AAAAATTTTAAATTCTACTATAATAATATCAGAGGCATGACATCAAAACT
AGAACAACTAACTGAAATAATACAAGATAACGTAAAACCAACGATGTTCT
GCATAGTTGAAACCCACCTACAACAAGACGAGGCAGTCAAGGAGATCGAG
GAAAAATTTCCGGAGTACAAGATTCTGAGAAACGACAGAACTAAAGCAGA
TACAGGAGGAGGGATACTGATAGCAGTAAGAAAGGAGATCGGAAAGAATA
TGATAGAGGTAGATAGACAAGCGGACGAAGAAGAAACATTATGGGTAAAA
ATTGACAACAAACAAACGAAAATCCGAATAGGAGTGATCTACGCCCCCCA
AGAATCAAGAACAGACTTAGAACAACTTAAAAATATGTATAACAGAATAC
AACAACAAGTTAAAGTAGCAAAGCGGCAAGGTGAAGAACTCCTTATATTA
GGAGATTTCAACGCAAAAATATACGAGCAAGTCACAAAAGGTGGCAAATT
ACTTAAAGAACTAGTCAAGGATAACGAGATATACATTGTGAACGATGATG
CAGAGGGGAAATGGACTAGAATTCAAGGTGATGAAAAATCGACCATTGAC
TACGTAATGACGAACAACTATCGAAAAGGAGGTGTCAAGATGACGATAGA
CGAAACTAAAGCACTAACCCCGTATTACATCAAAGACAAAGAGGCAAAGT
ACACCGATCATTGTGCAATGATTGGCACCGTCAACTGGAAAACAACAGCA
TCGGTAGAGAAAAAGAAAAAATATATATCAAACATAACAGTGAAAACGAA
AGCAGCGTACAAGATCGTAACAAATAGTGAAAAACTCACATCGATAGCGA
CAGAAAAGTCACTACAACTTAACGACAGATACGAGAAATGGGAAGATGAG
ATCATCAAAATGAGTAAAAAATGCTTCACAAAGTGCAAAGTGAACAAATA
CACCAAAACCAGCCCAAAAAGAAGAAAACTGATGAAAAAAAGGAGGGACC
TGATAAAGATAGAGAAAGGTAACGAAACTAACGAAAACAGCATAGAGAAA
ACAAGAATCAAGCTGCTAAACCAGCACATAGAAAGTGAAACGAAAGAAGA
AAGAATGAAAACGACACGTAAAAAAGTAGAGCAAATCGAGAAAGCGGGAG
GAGTCAACAGTCCAGACTTCTGGAAGATCATTAAGCCAACAAAAGATAAG
ACACAGAAGAAAACGTCAATGATAGATGAACGAGGAGAGGTGAAGGAAGA
TCAAGAGGAGATTAAGAATGTATACAAGCAATGGTACCAGAATCTACTGA
TGGCATCACCGGCAACGACAGAGGAGGAAAGGAGATCGGAGGAGAGAGTC
AATGAATGTTTTGAGATGATAAAGAGGGAAGCAACTAAATGCGAGATAAG
AGAAATATCCAGGGAAGAACTGGATAAGGTTATAAGAAACCTCAGCACGA
AAAAGGCTGAGGATTTCAGTGAAATAAAAAATGAGTTTATAAAGTACGGA
GGAGAGAAATTAAAAACGAGTCTCCTCAAGTTATTGAATGAAATTTTATT
GAAAGCTGAAATTCCAGATAGATGGAAACATATGATTATAAAGTCAATTT
ATAAAAATAAAGGCAAAAGAAATGAAATGAAAAATCAACGGGGGATCTTT
CTAACGAGCATAGTGAGCAAGATCTTTGAGAGAATCCTTCTCAATAGAAA
CAAAACGACGATTGAAGAGAATATGTCTCCTTTCCAGTGTGGTGGAAGGA
GCGGCAGGGGAATTTGTGACCATCTCTTTACGATGCGAGCACTAATTGAT
GACGCGAAATATTACAACAAAAATCTTTACTTGTTCTATGGTGATTTGGA
GAAATGTTTTGACAAACTCTGGCTTCGCGATTGTATAGTGGAAGCGTGGA
AGGCAGGAGTACCTGCTAACGAGGCGATGATCATTTTCGAAATGAACAAA
GAAGCGAAAATAGTGGTAGACACGCCACACGGGAGAACAGCAGAGATAAC
AACCAAGGAGATTGTACGTCAGGGAACAATTTGGGGGCCAACATTATGTG
CAGTATCCACAGAGAAGGTGAACAAAGTCGGCGAAAAAGTGAGTACCTTA
TATTCAAATTTAAATGTAGAGTCACTCACCTATGTAGATGATATTTGTGG
AGCAGGAGGCAGAGAAACCGTCTCCAAAACCATTGATAACTGTGCGAGGA
TGGAGGAAAAGAAGAGAATGACCTTTAATGAAACTAAAAGTAACTATCAA
ATTTTAGAATTTGGCGAAAAAAAGAGATCGAGTAGAAATTAAGAAAAGGG
TTAAAAAAGGCCCTATTATCAAAACCGATAAATATAAGTACCTAGGAGAT
TACGTCAACAACAAAGGTACATATAAAGATACGATCCAAAACAAGGAGAA
AAAGATATACGGAATTACGAAGGCAATTATAAAAGATGCAGATTGTACTG
GAGAAAGTTACGGAAAAGTAGTTAACAAGCTATACTTAACGAAGGCACTT
CCATACGTGACGTCGAACATGGAAACTTGGAGTGTGATTTCAAAAAGTGA
AATGGCAAGCATTGAAAAAATGCAAAAAGATATGCTATTGAGAATATACG
GAATGCCAAAAACAACACCGTACGAGCCATTCCTAAGTGAATTAGGCATT
TGGCCTATAAGACACTACATAAATTATAAAAAACTTCTACTGTTACACAA
CCTAATCAATTCTCCAGATGAAAGGGTAGCAGCAAAGATTCTAAAGGCCC
AAATGGAGAATGAAATACGAAATTGTTGGTACAGTGAACTGAAAGAACGA
TGTGACCAATACGAAATCGACACAACGAGCGTGAAAGATATATCAAAAAA
CGAGTGGAAAAAAAGAATACGAAAAGCCATCACGAAAAGTATTGAAAACG
AAGAATGGACGAAACGAACAAAATCCAGAAACAGTAAGGGGTTCGAAAGA
AAGAAGTACTTAGACGAAACTGACAAAGCCACAATGAGAAACATATTAAG
TATGAAAGTAAATATGATAGACGTCAAGATGAATTACAAAGGAAAGTACA
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1138226..1141301 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2293-3075:784 |
| Aaloc | 1-2292:3077 |
|
