|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2125264..2132354- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041641 ID=XLOC_041641|Name=XLOC_041641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7091bp|location=Sequence derived from alignment at sc0000006_pilon:2125264..2132354- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTGAAGAGTATGAAAATTGCTTGGATGAATTCCGCACTTACTA
TGATCAATTGAAGAGTGTAGTAAAAAACAAATTACCTAAATTGACTGGTG
GTAAGTGAAAAAATATCATTATACGTTATAACGGATCTGAAAACTTTCTT
TCCATGTCACTGGGTGACGAAATGAAATTGGACAGTTGTATTTTGTCTAT
TATTTTTAGGGCTGGGTAGCTTCAAAAAGCGCAAAAACTGGACAAAATAG
CTGTTTCTGGCTGAAAAACACGGTTTTCAAGGGTTAATATCTCGAGTTAG
GTACAGAAATCACCTATACTTGCAATATATCTCTAATCTTAATTTTTTGA
GAGCTTTCCAAAAATATACAACAGGTCTCCGTTTTCTCGAGCTAAAATTT
TCATTTATTTTTAACCCTATGATTTTTGCCTGAGACCGTCATATTTGTCC
GAAAATCACACCAAAGTGTCCGAAAAAAAATTGGAAACATAGTAATTTCG
ATTCCCCTACCCCTTAGCTTTCCAAAAATGCATAACAAGTGCTTCTAACA
AAACAGTCATGCGATTTTACAAAATGCCCTCTACTATATCATGAAAAAAA
ATTATCAATGAAAAGTATAAATTTCTTGTTGTTATTCCTTATTTTTATAA
AGTTGCTCAGGAATTTTATTCAATAATCTTTATAAAGAATGTTTAGTAGC
AAGAAACCTGTTACTTACTCAGATTTTCTAATTTTTATTTTCAGAAATCA
GAAAAAGAGAATTGAGGAATGCTGATAGACTCTTGGAAGATGCTGAAGCT
CAGGTATTATTTATTAGTATCATTACTTTTATAAAACACTAATTTCTGCC
GATGGACTTTTTTAAAATTGTTAGACCAAAGTCTAGCAATCAAAATTGGT
GATTATTTACTGATGTGAAAGGATGGTTGATTGCATCTTTTTCATTGTCT
GTAAATCAAATTTAAGTTTTGTCTTATATTTATATTATAATTTACTTATT
TTTCATAGCTCACACAAATGTTCGAAGAAGCCCAGTCAGCCCCTGGTGCT
TACAGAACCTCTCTACTTTCACAGACAAGAGGTCATAAAAGCGATCTTGA
GAAGCTGAAGCGAGAACTTGTAAGCTATATTTCTCTTTTAACAGTAGTGG
AAGGAAAGTACCTTTAATTGTTTAAAAAAGGGAGACCAAATTTTTATCAT
GGTTACTTTCGAATAAGCGGGAGAGGAGAGGTTGGAAAAAATCTCAAAAC
TTAATAAGCGGGGGGTTAAATAAAAAGGAGGCTAATACAGCAGAATTAGG
AAAATTTCAAACATTCAAGTAGGATTAGTTTTTAACAGTACCGGGTGACC
CACGAAAAAGTTCAGACGTTTCCCGACGTCTTGAGGCCGAACAAATGTCC
CAAAGTGCTTGGAGTTTTGATATTTAGAAAGTAGATATCCTAACTTAAAA
TTTGAGCCATCACTTTTTAAATTTGACCAACTTGTTTCTACTTATGAGCT
TTTAAAGTCAAAATTCACTTTTCGAAAAGTGTAAAAAACACGTAAAAAAG
AGGTATTAAATTCATGCAATCAATTAGAAAATCACTTACAAATTGACTTA
TTTAACGAGTTTTATGACATTAATAATTAATAAAAACACATTTGAAAGTA
ATTTTTGTTTAAAACAAGACTAGACTAAGATTTTTTTCAAAAACTGTATA
TCAAAAACGTCTAAAAATACCCAATTTGATACCCCTTTTTTACGTGTTTT
TTACACTTTCCGTAAAGTGAATTTTGACTTTAAAAGCTCATAAGCAGAGA
ACAAGTTGGTCAAATTTAAAAAGTGATACACGCTTTTTTTTTATAAGAAT
ACAATTTATAAGAATGTCCATGATGAAAATGGCCAAAAAATTAAGAATAT
GGTAAGATATCACCATCATGGAATTTAGTAACTGAACTTAAGAATGCCAT
TTTTAATGCATTTTAACCTGTAGATTGCCAATTTCGATCTTAACCTAAGA
ATGCCGTAAGAATATTTTTGGATGATTTTCACCAACAAGTTAAGAATATA
CATGATGAAATGAAAAAACACCATTCTTATAAAAAAAAAAGCGTGTAGCT
CGAATTTTAAGTTAAGATATCTACTTTCTAAATACCAAAACTCCAAGCAC
TTTGGGACATTTGTTCGGCCTAAAGACGTCGGGAAACGTCTGAGCTTTTT
CGTGGGTCACCCGGTATTTTCCAAAATTTCTTGTTTTCTAAGCATGGAAA
GGATAAAAATAGTAAAATAGTGCAAAGATATTGCCTCGATTGATTTTAAA
AACTACTTTAGGCGTACAAACTTTTGCGAAAAATCGCGAAATTTGCGACA
TTTACTTTCGCGAATTTGAGGGAAAAACATTTTTCGTGAGCATAAACTTT
CGCGAATCGTTGGATAAAAATGATAATTTTCGAATGAAAATTGCCTTAAA
AGTGAAAAATATCCCTTAAATCCACTAAAGACGGTTGCTCTTTGACTTTA
AAAAATTGCATTAAAAGATCATAATATGCTGAAAATTTGATGTTTATGTA
TTATGATTTCGAGGTTTTAAAGATTTCCAATTTTTTTGAGAATTTTCGCG
AGCATAAACTTTCGCGAATTGCCCTGTTAAGAATTTTCAAAGACATTTAT
TTTCGCGAAAAAGGCCAAAATTCACGAAATTTGCGAAAGTTTCTGCTCGC
GAAAGATTGTATGCCTAAAGGCCTGTTTTCATCGATCGCGCGAGCGTGCA
CGCTAGGCCAAAATTATTAAAATAGATTTGGCCGCACACTCCGCGCAATC
AATGTTTGATTTCCATCAAAAACATACACAATCTGTATCTTTACATTTTT
TTGTTTACTCAGCAGTTTTCTCTTTCTTGATTGGTTGAAAAATTATCAAT
TGAGATGTGCGCTCCTGTACGCTCAAAAAAGTTGAAAATTTTCAGCGTAG
AAAAGACCACAAGAGCGTACACTTTTTGTGTACAAGAAAATTTAATTCGT
GACGTCAATAGGCTATTTTAGGAAATTTTGCCCTAGCGTGCACGCTCGCG
CGATCGATGGAAACAGGCCTTAAAGCATAACAAGTCTCTCAGGCTGGAAA
AAATACGTCATCTCTGCGAAAGCATCCAGCGAGGTCCTTTTTTTAAACAT
CTGTTTCCCAGGCATAGCCTTCCTGGAAAATTTGATCTGTTGGCCAAAAG
TTAGCCCAATTAATCAGAAGAGGAAGGTTTTTAATATCCAAAATATTTCG
GCCCTTACTGTCAGTTACTGTTCATAGAAAGCCTCAAATTACATTAGAAA
CTTTTGCATGATACCATCGCTTTCCAATATTTTCATATAATTCTAGATCA
CGGCTAAATCAACATCAGTCCAGTCAAGCAGCAGCGGTAGTAGAGATGAT
CTTCTTGGCTATGGTGGCACTTCAGCTACCTCTAATTTTGTAAGTCGAAT
ATTTGAGTACCTATCTTTCTTTTGCTGAAACTTCTCACTTGTTGTCAAAG
TATAAGACATGCGGGGTCAACTGAAACCTTCTATGATTCCTTCTAGATTT
AGAACGCCATGCTATGATTGAAATACAGTATTAACGCCTCTGTAACTCGA
ATGACTGTGTCCTTGACTATTCGAAAATATGTTCTCTGCCCTTCAGCTAA
GAATGCCTTATAAACCTTAATCCACGACTCGAAATTTCCTTAATTCAAAC
ATCATCATACAAAATCTGCGTTCCCCGTGCGGGTTGCGGGTTTTCAGTTA
TGGAGACTCCACTGTAGGGAATTTTTTTCAGTCTCTCAAACTATATCTTC
CCTCTCGTTAGAATTTTTGGTGGATTTTGTCTGTCAAGTTAAAAACCTCT
ATTATTTAACTCAAAATGGATCTTTTTATATAGCACGACAGACTTTTTCA
AGGGATTTTTAATGAAACAATTTCTTTTTGAAACCCCTCCTTTATTTTAC
TTTAGGAATCACAGCAGCGTGGTATGATGCAAGAAGGTTTGGACATTATG
AACCGGACAAGCGATAGTGTTGCACGATCGCAAAGGATAGCTGCTGAAAC
AGGTTTGTTCTGATAAATCTTTGTTCTTATATTTCAAATTAAAATTTAGT
ACGTACTTAGGTTAGTACTTAGGTTTTACTAAATCTAGTCTAAATCTTAA
AATCTTAGACGTAATTTTCAGCTGAATTTTCATACTATTGAATATGCTTT
GATATCTATGATCTATTCTACTCAATAAGTGGTAGATGATTCCATCAAAG
CGGGCTTGATGATCCAGACCAGAGCTTCAAAATATGTGCAAGAAAAACAC
AAAATTTGATTACGATAGTACTTCAAGTCTCATCTTCATCGAATCGCTAG
CTATCAAATGAAAAATGGCAAATGCTATGCTTTTATGTTGAAAAATGGTC
ATCTCCAAATTTAATGTTTATGTGCAAAGAAATAAAGTCTTCTCGTTTAT
TTTTCAGACGAATATGGTGTGCAGATATTGGCAGACTTGGATGATCAAAA
GGAATCACTAATCAGAGTGCGGGACAAGGTACGACATTACTTGAGGCGTA
CACATTTTCGCGAGCAGAAACTTTCCCAATTTTCGCGAATTTTAGCACTT
TTCGCGAAAGTAGATGTCTGTGAAGATTTTTGAAAGAGCAATTCGCGAAA
GTTTCTGTTCGTGGAAGTTTGTACGCCTAAATTACTTGATACTCGTTATT
CCTATTCATTTCAGGTGTTTTAGAAGTACATGTTTTAACCCCAGGTACTC
TTGTGTGTTTAATTGTAGGGGGTCATATATTGCAATTTTCGGAAAATCAT
GCCCATATCATTTGATAATGACCCCCCATTTTATGACCTTTATGATACGA
AGTGCCAAAATTGGCCAAAAACCTTCATTTTCCTAGGAATTTTTAGCAAA
ACCAGGTCAATAGCACTTATTTATGAACCCCCCCCCCCAATTTGTTGATT
TTTATTTGGAGTACTGACCCCCTGCTTATTCCACCCACCCCTCCCCCTAC
AATTAAGCACATAAGAGTATAATTAAGTTGCATCAAGAAAAGAGCTCATT
TTATTTCATTCTTATTTTTTTTATATACCGGGTGCACCAAAAAAAAGTAT
ACAACTTTGTCGAGATATTGTGAGCTTCAGGATTTAAATTTTTTGTTCAT
TCTTTTTTTATCACATAGAGGATGCTCTAACTTGAATTTTGAGCTATCAT
ACATTAGGTTTGAAAAAGTAATTCGAAAATTATTTAAAAAAAACTGACTT
TTTTTAATGTCGAAATTTCAAAAAAATCATCAAAAACAGCGAGCAAACTT
TTCTCTTGACACTTACCTTCTTTACACATAAAAATACCAAAAAATGCAAC
TGTGTTCATCAAAACTTGTTACAAATTTAAGAATATGGTAAAACAAGATA
TTCCCATCTGGGATAACATTTTCGGAAAAGCTGAAGATTTTTTTTGGAAA
TCTCCAAGAGAGGTTTTGATTTTATGTGTGTGTGCTATGTGAGAAATTTT
TTGAAAAAATAGATAATTATTCCTCGACTTGTTTCTCAAAGAACTTGGGT
TTGCATTGAGTTTTCTGGTGTTGGAAATGTTTATGACATGCAGATAAGAT
GGACAAACTGTTGGCAAGATATAAGATAAGAGAAAAAAGAACCAAAAAAA
CAATGAAATTATGTTTTTGTCATTTTTGTCTTATTTATAGCGTGATTGCT
GTTTTTAATGATTTTTTAAAATTTAGACATTGAAAAAAAGTCAGTATTTT
GGAAATAACTTTCGAACTACTTTTTCAAATTTTATGTATAATAGCTCAAA
ATTCAAGTTAGAGCATCCTCTATACAATAAAAAAAGAATGGACAAAAAAT
TTAAATCCTGAAGCTCACAATATCTCGACAAACCTGTATACTTTTTTTTG
GTGCACCCGGTATAGTATAGGTAACACGAACAAATAGTACAACACTAAAG
GTTCTTAACCTCCCGCAAAAGGACCACCAGATCATACCGCCAGGAGTTTT
AAACGAGTCCAGCTAGAGGGAGCAGATTTTGTGAGAATCTTCTAAAATGC
TATTAATTTTATTTTTCATTTGTTTTAAGGTTAAACAAACTGATTCGGAC
TTGACAAAAAGTCGAAGGATAATTCAGTCCATTGGAGTAAGGTAGGACAA
GTACTACTACGTGTCGATGGTCCTTTTAGAGACATCTAATTATTTTTTTG
GTATCCTCTAAAATTATCTTCTGCAAAGCTTCTAGTTCAAGACTGAAACA
AATAATCACTACTCGCTTACTCTGATCAGCCTTTTGAAAAACATTACTTT
GACAAACGTTTAAAATCTAAGAATGTAACTTTAAAATTTGCTAAAAGGGA
GTTTTTTATTGAAATAGCCCTTAAAGGTTTTGTTTTTAGATACGACTGAT
GTCGTATACTTACTCGTCAATTCTAATTTACAAGCTTTTTGATATTGAAT
TGACACGGATGTGGAGCAAGATTGGTCAGAAAGAGAAAAAGAAAAACATC
TTATTTTTGCTTATATCAGCACAATATAACAATAGGCAGACACTGTCCTG
ATATGAAACATGTGTCTGATATGAAACGAAAACACGTATGTAAAAACAAA
ACCTTTAAACCATATAAGCCCGAGCAATTTGATCCCCAAATTGTTCCTGC
CTCTTTCAAAGCACCTAAATAAGGCTGGAAAGCCTAGCCTATAACAGACC
CCTATAACAGTCATAGCCCCACTAGAACCCCCACTGGAAAATTTGGCGAA
AATTTCGTCCCCGGTGGGAAAGATACAATTTCAGCCCATTCGAAATTGCA
CTCCAAAACCATCCCCACTGGATATTTTTAACTTGGAACAATATGATTTC
TTTCTATCCAGTAATTTTTGTGGGAAAATGTTTTACTAGGGTTGCAAGAC
AGGGGTGCGAGACTGGGGTGTCCTATTCTATGATGGACTCTGATTTTATG
ATAGTAAAGCTCAGTGTCTGATACATTATATTTTTTTCTTCTTATAGGAT
GATTACAAACAAGCTGTTACTCATTGTCATCATTGTTTTAGAAGTCATCA
TTTTGGGTGCCGTTGTTTACATCAAGTACTTCAAAAAGTAA Coding sequence (CDS) from alignment at sc0000006_pilon:2125264..2132354- >XLOC_041641 ID=XLOC_041641|Name=XLOC_041641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000006_pilon:2125264..2132354- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTGAAGAGTATGAAAATTGCTTGGATGAATTCCGCACTTACTA
TGATCAATTGAAGAGTGTAGTAAAAAACAAATTACCTAAATTGACTGGTG
ATGTCTTCTGAAGAGTATGAAAATTGCTTGGATGAATTCCGCACTTACTA
TGATCAATTGAAGAGTGTAGTAAAAAACAAATTACCTAAATTGACTGGTG
AAATCAGAAAAAGAGAATTGAGGAATGCTGATAGACTCTTGGAAGATGCT
GAAGCTCAGAAATCAGAAAAAGAGAATTGAGGAATGCTGATAGACTCTTG
GAAGATGCTGAAGCTCAGCTCACACAAATGTTCGAAGAAGCCCAGTCAGC
CCCTGGTGCTTACAGAACCTCTCTACTTTCACAGACAAGAGGTCATAAAA
GCGATCTTGAGAAGCTGAAGCGAGAACTTCTCACACAAATGTTCGAAGAA
GCCCAGTCAGCCCCTGGTGCTTACAGAACCTCTCTACTTTCACAGACAAG
AGGTCATAAAAGCGATCTTGAGAAGCTGAAGCGAGAACTTATCACGGCTA
AATCAACATCAGTCCAGTCAAGCAGCAGCGGTAGTAGAGATGATCTTCTT
GGCTATGGTGGCACTTCAGCTACCTCTAATTTTATCACGGCTAAATCAAC
ATCAGTCCAGTCAAGCAGCAGCGGTAGTAGAGATGATCTTCTTGGCTATG
GTGGCACTTCAGCTACCTCTAATTTTGAATCACAGCAGCGTGGTATGATG
CAAGAAGGTTTGGACATTATGAACCGGACAAGCGATAGTGTTGCACGATC
GCAAAGGATAGCTGCTGAAACAGGAATCACAGCAGCGTGGTATGATGCAA
GAAGGTTTGGACATTATGAACCGGACAAGCGATAGTGTTGCACGATCGCA
AAGGATAGCTGCTGAAACAGACGAATATGGTGTGCAGATATTGGCAGACT
TGGATGATCAAAAGGAATCACTAATCAGAGTGCGGGACAAGACGAATATG
GTGTGCAGATATTGGCAGACTTGGATGATCAAAAGGAATCACTAATCAGA
GTGCGGGACAAGGTTAAACAAACTGATTCGGACTTGACAAAAAGTCGAAG
GATAATTCAGTCCATTGGAGTAAGGTTAAACAAACTGATTCGGACTTGAC
AAAAAGTCGAAGGATAATTCAGTCCATTGGAGTAAGGATGATTACAAACA
AGCTGTTACTCATTGTCATCATTGTTTTAGAAGTCATCATTTTGGGTGCC
GTTGTTTACATCAAGTACTTCAAAAAGTAAGATGATTACAAACAAGCTGT
TACTCATTGTCATCATTGTTTTAGAAGTCATCATTTTGGGTGCCGTTGTT
TACATCAAGTACTTCAAAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2125264..2132354 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 595-687:94 |
| Aaloc | 532-591:1013 |
| Aaloc | 463-531:2633 |
| Aaloc | 364-459:3137 |
| Aaloc | 271-363:3746 |
| Aaloc | 160-270:6084 |
| Aaloc | 103-159:6346 |
| Aaloc | 1-99:7092 |
|
