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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1810205..1813977- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041633 ID=XLOC_041633|Name=XLOC_041633|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3773bp|location=Sequence derived from alignment at sc0000006_pilon:1810205..1813977- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACATTCACACCGAGGCTTGATCGAATCATTGAAGATGAAGAATC
ATCAAAACATCCAGATGATCCAATCGATTTTGATGATAATATTTTGGAGG
AATATGATTTGCTGACGGAACAAGATTTATTCATTGCTCTTGAGATCAAT
CCGAAGAAATTCAAAGATGGCGAATACTTAAATGGTGTTACTTATAAGAA
AGATGGTGACGATCAAAGTGAAGATGACGATTCGAATTTTACGGAATCCG
GTGATGAATTTGATGGTTGCCATAGCAACGGGCCAAGCACCCTTAGTAAC
GGACATAATGGCGCTGTAGATCACTTTTCGAAATTACATAGTGGGACTCA
GGCTAAGAATTTTGAGATTATGCAACGTTATCAATCACCAATAGACTGTG
TTCGTAATACTTCGAGTAGTGCTGACTCGGCAAATAATGACGAAGTATCA
AGTATGATCAGTGATTCATCCAGTTTATCCAAAATTTCACGACGACGTAA
AATATCTGGTCATTCGAATCCATTTTCACCGATAACGCGTGGTCAAGATT
TGTTGAAAAAATATTTGAGCAATTACGAAGGTTATGAGTTTGATTCGAAA
AACGGCCGTAAAATATTCGTGAAAGCCATTTTGAAAAAATACATGACAAT
GTATTACGTCATTTCCCCGCCCCAGATCACTGCAGCAGATCTTGATAATA
GTGGTGTTTCAACTTTATTGGCGATACGCAACGCCTTGAAAATTAAGGAG
GATAAATTAGTAACGGAACAAAATGGCGGAGATAATAACGACAGTTTAAT
TACGTCATGTCTAATGTTTGACTACCAGAATAACGACGAGTTGAATTTTG
ATGAATTTGCTTGTATCGCGAAATTAAATGCTTTGAATGTTGAAGCTGTT
GTTGCACACTCGGATTCAAACATCAAAGAGTTCAGGTGAGGAAATTTTTA
GGAAGGCTACCAAACCTATGTTAGTAAATATTTTTTTAACAAGAACCTCA
AAAATTTTTCTTATACTGTACTATATTCTGATACCATTATTGATTCATAA
TATTGCACCTCTTTTTCAACAAGGAACCTTTTCTCAAACCAGAGCGCTAT
TTGCACCACTTTTGACAATTTTGATAGACTGATGGATGTCACTTGATACA
ATCGGGATGCTAAGGGACTGGGACTGAGTTTGCCCTTTTTTAAAGAGGAA
CTTGTTTTGAGTAATCAATTTATTTATTCAAATTTCAAGGAGATATTATC
CCCAGCAAGATTTCTTACTAATCTTTCTGGTAGACGGACGGGCTTTACCG
GGGCTGTGACGAATGACTTACAGTATAATTGAGATCCAATATCCTTTAGG
CCTCTCTTCTTAAACTCTTGCAAAAACGAGCTACCATAACTAGTTAGAAA
GAGGGCATCTTTATCATGTCTCTTAAGACATTATGTACGTCATAAATTCG
CTTTGGTTTTTCTTTAATTATATATTGATATAGCCTATAAATCAGTGATT
TCACTGTCTAAAACAATAAATGACTCACAACTCTCTTTTCTAGGAGAGAC
ATCAAGCTCTCTTGTCAAACGGACAGTCGAATATGCGTTTGCTATTACAC
TTCCAACGACCTCTTCCAGTGTTCCGGTTCCTATTTTACATTAGTCGGTG
GATATTCCAAAGAGAAAGATCTGGTCCTGCTTTTTGATGCTTCCAGTCAT
AAAATTCCACCATTTTGGATACCGTTACCAATACTGTTCAAATCCATTCA
AAGCAAACCGATCGATGAGACTAATATAAAAGGTATGTTATGTTTTTGAA
AATGAATCCTTAGTTCTTTGCACCCTTGTACGCCCTCTTCTCACAGACCC
ACTCAGACCCCTTCCCACTGGAAAAAATTGGCCAAAATATCGTTCCATCC
ACATTGAATTTTCTGGCTCGAAAACAATAAAATTCAAATCCGCCCCAGCC
ATAAAAACAAGAGAATATCCAATCCCCATCGAGTGTTTTGATCCGTTATT
TTTACCCCCCACTGGCTGAAAAAATCCCACCGGGTCTGTGAGAAGGGGGT
GTCCTTGTATCCTTATCCTTGGGGTGTCCTTAGCGTTTTTTTGCAGTGTG
GGTAAAAAGAAATACCAACAGGGGTGTAAAATTCGTTTGACTTTAATTTG
CTAATAGTATGCTTTTACGGCATCTAAAGTTTTCTCCATTTAAAGTTCCT
TGATTTAATAGAGAATTAGCTTGTGCAAGAGAGGTTTAAATGTGATATTT
CCAACAAGGGTATTAGTAGGGGGCCAATCCTTAGGATCCGTGACATCTTT
TATGCGACGCAACCGCATGTAGTTAGTTCGAAAGTAGGAAGGTTTTTAAG
ACTTTTTTGAGAGGGGGCCCGCGAATTAGGCCCGGCAAAAGTTTTTATGA
CTAAAAACTGACGTTTACAGGCAAAACTGTAATGGAAAAAAATGAGTAAA
AAATTGACGTTTTTTAAAAGTCGAATTTGAAAAAAATGAATGAGACCATC
GGAAAGAGCATGAAATTCTGAACAAAAAAGTATACTACAACAAGTCTTAC
TCGAACACACATATAGGATACATGCAAGGGTAACCATGACACAGGCAATA
TTTGAGAAAGAAAAGCAGCGTCCGGTGGTGGTCAAAAAGGGCTCTTTTCC
TGGTGTTTTTCTACCAAAAAGGCTGATTTTACCTAAATTTCAGTGATTTC
AGGAGGGGCAGTGTCGGATAACCGGACGCTAAAAGGGCATAAAAAATGGC
CTGTGACAAATAACTACTCATGAGTGATAGGATTATTGTTACTGAAATAA
GACTGGGAGAAACTCAATTAACAGATCTTCATTTACGCGGGGCTTTTAAA
GTGTATATTGTTGTAGTCTTACGGTCTTGTAACCCTGTTTCCACAATACA
AACTCGGTCAGAAACGGAAATTTACTATTCTAAGCCTGAAAAGTAAGGTT
GACTTATTTTAATCTGGATATTTTGTGTTGACAAATGATTTGTTTTCTTA
TTTTCTCTTACTGTTTAGAATTCAAACTGGGTTATTTTCTTTTGGAGAAA
AGTGAAAAGAAAGCTTCCATATTATTGAACATCAACAAAAAGATTTCTGT
CTTGTTAAACGCTCCCGATGAACATTATGAGAAATTATGTAACATGAAAG
ATGATTGGGAAATGTGGTTAATATCTCCACTATCCACATCTAGAAAAGAT
GACATCCTCAGACTTGCGGTTGATAATATTATGGAGATAATAAAGAAACA
AACTTTAAGAACAGTCCGTGTCAAAGAAGAGCAAGCTAAGTTAACGTACA
AACAAGGCAGTTTAGTTGACTCGCTAACAAAAACAAAAATTTTCCCTGTA
ATTGAGAAATTCGTATCGAATATGAATAATGATTCCTTATCGAAACTAAC
AATTTTCTCCGAATGGGTCTTAGAGACCGTCTTCATTATGCGAAAAAGTG
ATAAAAACAAAAACAAATTTGCTGCTCCTACAAAGAAAAAGAAAAAGAAG
TTGGTTCGTACTAACGTTAATATGAACACTTTCAACAACACGACAATGTT
AGCTACCTGGTTGTTATTCTGGCCGTACGCGCATAAGAAATTTGATTCGA
ACAGTACGTCACTCTCTGAATGCATTGAAAACGATTTAAAAATATTTCCA
TCTAAATTGGTAGAGACTTTTCATCATCAAATGGATTTTGTTATCAAAGT
AGTTCAATCTTCTACTATGAATGTTGTCAAAAGGAAAGCCAGAAAAAATG
GAACTTTGCCACATGGTTTATGA Coding sequence (CDS) from alignment at sc0000006_pilon:1810205..1813977- >XLOC_041633 ID=XLOC_041633|Name=XLOC_041633|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3858bp|location=Sequence derived from alignment at sc0000006_pilon:1810205..1813977- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGACATTCACACCGAGGCTTGATCGAATCATTGAAGATGAAGAATC
ATCAAAACATCCAGATGATCCAATCGATTTTGATGATAATATTTTGGAGG
AATATGATTTGCTGACGGAACAAGATTTATTCATTGCTCTTGAGATCAAT
CCGAAGAAATTCAAAGATGGCGAATACTTAAATGGTGTTACTTATAAGAA
AGATGGTGACGATCAAAGTGAAGATGACGATTCGAATTTTACGGAATCCG
GTGATGAATTTGATGGTTGCCATAGCAACGGGCCAAGCACCCTTAGTAAC
GGACATAATGGCGCTGTAGATCACTTTTCGAAATTACATAGTGGGACTCA
GGCTAAGAATTTTGAGATTATGCAACGTTATCAATCACCAATAGACTGTG
TTCGTAATACTTCGAGTAGTGCTGACTCGGCAAATAATGACGAAGTATCA
AGTATGATCAGTGATTCATCCAGTTTATCCAAAATTTCACGACGACGTAA
AATATCTGGTCATTCGAATCCATTTTCACCGATAACGCGTGGTCAAGATT
TGTTGAAAAAATATTTGAGCAATTACGAAGGTTATGAGTTTGATTCGAAA
AACGGCCGTAAAATATTCGTGAAAGCCATTTTGAAAAAATACATGACAAT
GTATTACGTCATTTCCCCGCCCCAGATCACTGCAGCAGATCTTGATAATA
GTGGTGTTTCAACTTTATTGGCGATACGCAACGCCTTGAAAATTAAGGAG
GATAAATTAGTAACGGAACAAAATGGCGGAGATAATAACGACAGTTTAAT
TACGTCATGTCTAATGTTTGACTACCAGAATAACGACGAGTTGAATTTTG
ATGAATTTGCTTGTATCGCGAAATTAAATGCTTTGAATGTTGAAGCTGTT
GTTGCACACTCGGATTCAAACATCAAAGAGTTCAGATGACGACATTCACA
CCGAGGCTTGATCGAATCATTGAAGATGAAGAATCATCAAAACATCCAGA
TGATCCAATCGATTTTGATGATAATATTTTGGAGGAATATGATTTGCTGA
CGGAACAAGATTTATTCATTGCTCTTGAGATCAATCCGAAGAAATTCAAA
GATGGCGAATACTTAAATGGTGTTACTTATAAGAAAGATGGTGACGATCA
AAGTGAAGATGACGATTCGAATTTTACGGAATCCGGTGATGAATTTGATG
GTTGCCATAGCAACGGGCCAAGCACCCTTAGTAACGGACATAATGGCGCT
GTAGATCACTTTTCGAAATTACATAGTGGGACTCAGGCTAAGAATTTTGA
GATTATGCAACGTTATCAATCACCAATAGACTGTGTTCGTAATACTTCGA
GTAGTGCTGACTCGGCAAATAATGACGAAGTATCAAGTATGATCAGTGAT
TCATCCAGTTTATCCAAAATTTCACGACGACGTAAAATATCTGGTCATTC
GAATCCATTTTCACCGATAACGCGTGGTCAAGATTTGTTGAAAAAATATT
TGAGCAATTACGAAGGTTATGAGTTTGATTCGAAAAACGGCCGTAAAATA
TTCGTGAAAGCCATTTTGAAAAAATACATGACAATGTATTACGTCATTTC
CCCGCCCCAGATCACTGCAGCAGATCTTGATAATAGTGGTGTTTCAACTT
TATTGGCGATACGCAACGCCTTGAAAATTAAGGAGGATAAATTAGTAACG
GAACAAAATGGCGGAGATAATAACGACAGTTTAATTACGTCATGTCTAAT
GTTTGACTACCAGAATAACGACGAGTTGAATTTTGATGAATTTGCTTGTA
TCGCGAAATTAAATGCTTTGAATGTTGAAGCTGTTGTTGCACACTCGGAT
TCAAACATCAAAGAGTTCAGGAGAGACATCAAGCTCTCTTGTCAAACGGA
CAGTCGAATATGCGTTTGCTATTACACTTCCAACGACCTCTTCCAGTGTT
CCGGTTCCTATTTTACATTAGTCGGTGGATATTCCAAAGAGAAAGATCTG
GTCCTGCTTTTTGATGCTTCCAGTCATAAAATTCCACCATTTTGGATACC
GTTACCAATACTGTTCAAATCCATTCAAAGCAAACCGATCGATGAGACTA
ATATAAAAGGAGAGACATCAAGCTCTCTTGTCAAACGGACAGTCGAATAT
GCGTTTGCTATTACACTTCCAACGACCTCTTCCAGTGTTCCGGTTCCTAT
TTTACATTAGTCGGTGGATATTCCAAAGAGAAAGATCTGGTCCTGCTTTT
TGATGCTTCCAGTCATAAAATTCCACCATTTTGGATACCGTTACCAATAC
TGTTCAAATCCATTCAAAGCAAACCGATCGATGAGACTAATATAAAAGAA
TTCAAACTGGGTTATTTTCTTTTGGAGAAAAGTGAAAAGAAAGCTTCCAT
ATTATTGAACATCAACAAAAAGATTTCTGTCTTGTTAAACGCTCCCGATG
AACATTATGAGAAATTATGTAACATGAAAGATGATTGGGAAATGTGGTTA
ATATCTCCACTATCCACATCTAGAAAAGATGACATCCTCAGACTTGCGGT
TGATAATATTATGGAGATAATAAAGAAACAAACTTTAAGAACAGTCCGTG
TCAAAGAAGAGCAAGCTAAGTTAACGTACAAACAAGGCAGTTTAGTTGAC
TCGCTAACAAAAACAAAAATTTTCCCTGTAATTGAGAAATTCGTATCGAA
TATGAATAATGATTCCTTATCGAAACTAACAATTTTCTCCGAATGGGTCT
TAGAGACCGTCTTCATTATGCGAAAAAGTGATAAAAACAAAAACAAATTT
GCTGCTCCTACAAAGAAAAAGAAAAAGAAGTTGGTTCGTACTAACGTTAA
TATGAACACTTTCAACAACACGACAATGTTAGCTACCTGGTTGTTATTCT
GGCCGTACGCGCATAAGAAATTTGATTCGAACAGTACGTCACTCTCTGAA
TGCATTGAAAACGATTTAAAAATATTTCCATCTAAATTGGTAGAGACTTT
TCATCATCAAATGGATTTTGTTATCAAAGTAGTTCAATCTTCTACTATGA
ATGTTGTCAAAAGGAAAGCCAGAAAAAATGGAACTTTGCCACATGGTTTA
TGAAATTCAAACTGGGTTATTTTCTTTTGGAGAAAAGTGAAAAGAAAGCT
TCCATATTATTGAACATCAACAAAAAGATTTCTGTCTTGTTAAACGCTCC
CGATGAACATTATGAGAAATTATGTAACATGAAAGATGATTGGGAAATGT
GGTTAATATCTCCACTATCCACATCTAGAAAAGATGACATCCTCAGACTT
GCGGTTGATAATATTATGGAGATAATAAAGAAACAAACTTTAAGAACAGT
CCGTGTCAAAGAAGAGCAAGCTAAGTTAACGTACAAACAAGGCAGTTTAG
TTGACTCGCTAACAAAAACAAAAATTTTCCCTGTAATTGAGAAATTCGTA
TCGAATATGAATAATGATTCCTTATCGAAACTAACAATTTTCTCCGAATG
GGTCTTAGAGACCGTCTTCATTATGCGAAAAAGTGATAAAAACAAAAACA
AATTTGCTGCTCCTACAAAGAAAAAGAAAAAGAAGTTGGTTCGTACTAAC
GTTAATATGAACACTTTCAACAACACGACAATGTTAGCTACCTGGTTGTT
ATTCTGGCCGTACGCGCATAAGAAATTTGATTCGAACAGTACGTCACTCT
CTGAATGCATTGAAAACGATTTAAAAATATTTCCATCTAAATTGGTAGAG
ACTTTTCATCATCAAATGGATTTTGTTATCAAAGTAGTTCAATCTTCTAC
TATGAATGTTGTCAAAAGGAAAGCCAGAAAAAATGGAACTTTGCCACATG
GTTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1810205..1813977 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1177-1929:754 |
| Aaloc | 937-1173:2230 |
| Aaloc | 1-933:3774 |
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