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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1774507..1779614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041632 ID=XLOC_041632|Name=XLOC_041632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5108bp|location=Sequence derived from alignment at sc0000006_pilon:1774507..1779614- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGCGCTCGTCCACCCTCAACTGATGGATATGACCGCCCACCACG
TCCGCCCTCTTCCCTCTCTATGATGTCGACCGCCTCTTCTTTCACTTCAC
AAGCGCTCGATCGTTTGTCCGAAATGAATAAATGTCCGAAATGTAATGAA
CAAATCCGTGACCCTAGAATGTTACCATGTCATCATACCTTTTGTGCTGA
TTGCATTCGTGAAATGATCGGGTGAGAGTTTCATTTTAGCCTGAACGTCA
ATTGTATTACACGTTTTTTTTTTAATAAGGAACCTTATCTTTGCTCTGAG
CCTGGAGTTCCTTATTTTTACAGAGAACTTCAGCCTCAAAGTTCCTTGTC
GAGTTCCTTATTTACATAGCTGCTAAGTTTGAATAACCATCTCTTACTGT
TCCTTAAAACTTGTTTTCTTATTCTCAGCCTGAGTTCCTTAACAATTCCT
TATTTTTTGGAACATTTTCAGCCTCGAGTTCCTTACAAACGTGTTCCTTA
TAAAAAAAACAACGTGTACTTCAAATGACCAATTAGTGAAGTATCTTATA
AAAACTCCAGCTCATCCCGAGTTTGATTTCTCTCCGTTCCTAAAAGTATA
GTTTGAAATCTGGTTTAATTCCTTAGTTAGGAATGAGCAACTTTTCGAAA
TAAGTATAATTTAAAAACCAGAAGGAAATACATGCCAATGGTCACATGCC
CTACGAGGTCTAAATAGACGTAGAGAGTGTCTACTGCACATTTTTTTATA
TTCATAATTGGGCAAACATCTACTCAGAATCAAGTTTGGTAGTTCCTTGG
TCCATCAGAATGTATTTTGAGCAAACAAAAAAACATTGTTTGCTTTATAT
CTCTGAGTGAATAAGTAGTTGTTAGGGTGTCACTTTCTTTCCTCTTTGTC
TCTTATTATAAAACTTTCGAAAGTGAAAGAATTTGATACTTAGTCAATCC
GCACAGCTTGAGTGCTGTTTTTTAGACAGGGACTCATAATTATAGTAGTC
TGGTATGGGGATGAGTTTTAACTTGATATTGTTGGAAACTGTATTTTCTA
CATTGATAAAATGGAACCATTCATTTTAATTCAATAGGCGTTGAACGTTC
TTCTTAATTAGAAAATGGTGAAATTAAGAATATTTTAAGAAGATTTTTAG
GCTTAAAACTCAAAAAGTTAAGAATATCCGTGTACACTTGACCCATTTTA
AGCCTCTAACTCCTCGACAAGAATCAGGACAATTTTTCTAAGATATCGCT
TATTTTGCAACAAAAAGTAAATTCTTTTTTAGTTCTGCTACACGGAACGA
ATTCTTATGTCCACTTGATCGAACCACAATCGCTGTCCCGCCTCTCGGAA
TGGATGCGTTTCCGCCGGATAACCGCATGAAAGAATTGGAAAACATTCGA
ATTGATCTAGAACAAAGTCTTGTTTTGGAAGACCCTGAAACCGCAGATCT
TGACATTAATTTGGAAAGTTTGAATAAGGGAGTCAAAGATATTGAACATT
CATCAGCTATGGCTCAACACGAAGTCAATACCATGTTCGAAGCTATTCAA
AAATCTTTGAAAAAGAAACAGGATTCTTTCATTCAAGATATTCGACGTAA
AAGTCGACGTCAAATCAGTTTGTTAGAATTTGAAAAATTCCGTCTAATCG
AGACAAAGAAATTTCAAAACGAGCAGTTGATGGGTGATTCATCGTTTTAT
GAAGAAGAAATCATTGAACCTTTCAATCGCGGTCAGTCTATAAACACGTC
AACCCCGCCCTCCCCTGTATCATTCCGTAGCCGCAATCACCATTACAACA
GTTCAACATCAAGTGAACCAAGGCTAGCTCTTTTAGCCTGTCACATTGGT
CAACAACATATCGAATTTAACGAGACTGAAGGCGGGTTAACTAGACTGGA
AGAACAAGTGGAGAAACTAGGCAAAGTGACTTGTGACTTCGATTTGAAAG
TCAAACTGGATAGAAATTTGTTAACGTTAGATGAATTTCCATTTGGTATG
AAAGTTGGTGGTAACGATTCCTTTGAGTGGCAACCAAGTCAACCTAAAGG
TAAGAACGGGTTTTTCTATTAATTAAAACCTTATTTTACCGCTATTCTAA
CGGCGTCAAGTTACAACAAGCTCCTTCAAATACAATGGAGTCCAGTGAAA
TCTCTTTAACTCAAACCCCTACAACTCGAATGTGCTCTTTAACTCAAACA
ATTATTATGGTCCCTTAACTTTAAAATGCCTTAAAAACCCTACTTCATAT
CTCGTTTATTTCCTTAATTCGAATAAATTTTATTTCCCGTGTGTGTTCGA
GTTATGAAGACTTCACTGTGCAATAACTTTCAAATGCATTAAAAACAAAG
GTTTCTTTTTCATCAGAAATTTGTCGATTTTTCTGTTGACGATTCGATAA
AGATGAAACTTAGAGTACTATAATTCAAATTTTGTTTTTTCTTGTACACT
GTATGAAGCTCTGGTCCTGATCATCGAGCACTCTTTGATGTAATCACCTA
TCACTTATTGATATAGATTTTTCTGGAAATGATTAAAACGTAATAAAACC
AGGTAAAGACATGCGATTTAATCAAATTCCAATGTTTTGTATTGTATCTT
CTCAAACCTCTATAGGGCTTTGTAGACGATCACCGACTTCCATTCTAATG
GTCAGCAGTGGTAAAAGTGAGGTCATTGAAATGGATAACTCATTCAATGT
CGTCTGCCGTATCTCTGGACGAAACGTTTTCAGTAACAATATATCCGACG
TCGCCTCCTCCAACGGTTATATATATGTCGCTGATGCTGGAGCGTGTCAA
GTTGTCATGTTGAGTAAAGACGGCACACTCGTGAAACGGTTCGGAAAAGC
AGGCACTGGTGCACAAGAATTTAAACGACCCAACGGCCTTTGTGTTGATA
GTAAAGGAAGAGTGATCGTGTCTGATTCACTGAACCACCGTGTTAAAGTG
AGTAATCTCGTGGTCGGCTTGTTATTGTCATTCCACCCTCTATTTCTCGT
GAAAATTTCATTCCGAATTCATGATATTCACGACGTAATGTTTTTTTACG
GAAACGGAAATAACTCGGTTTTAGCCAGTAGTGGCAAATTTAAACTAGAC
AAAAGTTGTATAAAATTTGCCACTACTGGCAAAAACCGGGGTCTTCCCGT
AGAAAACATTACGTCATGAATATCACGTTAATAGTAGTTCTTTGATCCTT
GATTTTCATGAGTAGCTATTAAGAATTAGGAAATTTCACTTTTTCTAACA
AATCTTAAGTTCAAAACTTATTTTTTCGTTTTTTACTGGCAACTTTTCTA
GTCTGGTTATAATTTCGATTGACCTCAATATGTATTGGAACAACGTCAAT
AGTACAGTCCATAGTAATATTCAACACATATTATTTTATTCAGATCTTGT
CACCGGACCTGAAGACCGTTATCCTCACTATCACAAACGACCGGAAAAAG
TATAAAGAAGCCGGGCGCTTCAGTTTCCCGTATGGCGTAGCGTGTGACAA
AGAGGATAATATCTACATCGTGGATACGAATAACAAACGCTTAGTACAAA
TCAGTAAAGATGGCAAATTCTTGAAAGAAATCTACCCAGCAGGTTTGTAC
CTCTCTGTTAAAGTTTGATTTTCAAAGCCAAGGCAACTAAAATTACTAAA
CCTTTCAGGGATTTTTCTAAGCACTTTTGTCCGTATACTGGCTAAATTTA
AGATTGAGTTTTTGAAACTAAATCCAAAATAAATGAGGATTTTTGTGAAA
TTAACCTTTTTCGTTGTTTATGAGCAACAATAACTAATTATTAGTTTTTG
AAAGCTTCACCCTCTGAACACCCACAAGATCCCCAGCTTCATCAATGTAC
AGCTTTGCTGAGCAAGTCCCCTTTCAGGCATATTAGAAATTTAATCCAAG
TTTACAAAAACGGCCCCAGCTCAAAGTGCTTAAAAAATCGCAGTTTTAAA
TTTCTATGGTTGAATAGAGGATTCAAACACTACGAGTCTGAAAGCTTGGT
ACATAAAGGTCTTTTACATTGAACCTATCAACTGCCACCGTTTTAATGGA
CCACGATTGAACAAAACTAAGTGAGTATGTAGCCAGAGGGCCGACAAAGA
ATGTTTTTGCGACTGCAGGCAAGGGCAATAGGAAGGCTTATTTTCGGATA
TCCTTATTTTCTATACTCCTAGGTGCCAAATAAACGGGCCCCCCGCTTGT
TAATTTTTCGATTTTTTCCAAACACCCCCCCCCTTTATTAATTTTTGAAA
AAATTCCCAGCTACAAAAAGGAAAATTCCTTGTTGTACTCTAGAAAGCCT
AAATTTAGTCTATTTTGACCGTTTTTAGGGTTTTTAAGAGGTCCATTTTC
CAACCCCCCCCCCTCCCCGGTAATTAGGTCCCCCCCCCCCCCCCCGTTTA
TTTAATTTGAAAATTTTTTCCAACCCCCCCCCATTTATTCGAACCCCCCC
GTTTATTTGGCACCTAAGAGTAACTACTTTAATGGGAGCTCATTCGCAAA
ATTCAAGGTTTCTCAGGGATTTAATTACGCGAACGGCACTATTAGGAGTG
ATATTTTAAAATTTTGTGCCTTTTACTGCCAACTCATGTATATTTGGATA
TATTTGGACGTATATACGGATGCGTTTCATTGATGCTAAGTAAACATTTA
AAAAATAGTTTGTTTGACACTTTGTTTAAAAATATTTTGCAGATTAGGAC
TTTCCGAATTTCGATTGGGATTTAAATTCGCAGATGACATCCAAATCCGA
AAAATTTTGTCCCATTAATATAGTATATTAGTGCTACTATAAGCTTAGCA
ATAGTGTCGATGCATCAAAGGTATTAAAAAAGAATGATAATTATTTCTTA
TATTTCACTTTCCTGTCAGACATGGCAGATCCTCGTTGTGTGGCCGTCAC
GTCCGACCATCGTATCTTAGTCACCGATCGTGAGAACGCTCAACTATTGA
TCATTGATCTTCACACGAACACGACGACACGCGTGTCGGGAATCACGGAC
AGTCACGGTCGTGAAATCACCTTCAAACAACCGTACGGTGTTGTGGTTGA
TGGTACGGATAAAGTTTACGTTTCGGATATTGAGCGCAATGCATTATTTG
TACTGTAA Coding sequence (CDS) from alignment at sc0000006_pilon:1774507..1779614- >XLOC_041632 ID=XLOC_041632|Name=XLOC_041632|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3516bp|location=Sequence derived from alignment at sc0000006_pilon:1774507..1779614- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGCGCTCGTCCACCCTCAACTGATGGATATGACCGCCCACCACG
TCCGCCCTCTTCCCTCTCTATGATGTCGACCGCCTCTTCTTTCACTTCAC
AAGCGCTCGATCGTTTGTCCGAAATGAATAAATGTCCGAAATGTAATGAA
CAAATCCGTGACCCTAGAATGTTACCATGTCATCATACCTTTTGTGCTGA
TTGCATTCGTGAAATGATCGGATGGCAAGCGCTCGTCCACCCTCAACTGA
TGGATATGACCGCCCACCACGTCCGCCCTCTTCCCTCTCTATGATGTCGA
CCGCCTCTTCTTTCACTTCACAAGCGCTCGATCGTTTGTCCGAAATGAAT
AAATGTCCGAAATGTAATGAACAAATCCGTGACCCTAGAATGTTACCATG
TCATCATACCTTTTGTGCTGATTGCATTCGTGAAATGATCGGTTCTGCTA
CACGGAACGAATTCTTATGTCCACTTGATCGAACCACAATCGCTGTCCCG
CCTCTCGGAATGGATGCGTTTCCGCCGGATAACCGCATGAAAGAATTGGA
AAACATTCGAATTGATCTAGAACAAAGTCTTGTTTTGGAAGACCCTGAAA
CCGCAGATCTTGACATTAATTTGGAAAGTTTGAATAAGGGAGTCAAAGAT
ATTGAACATTCATCAGCTATGGCTCAACACGAAGTCAATACCATGTTCGA
AGCTATTCAAAAATCTTTGAAAAAGAAACAGGATTCTTTCATTCAAGATA
TTCGACGTAAAAGTCGACGTCAAATCAGTTTGTTAGAATTTGAAAAATTC
CGTCTAATCGAGACAAAGAAATTTCAAAACGAGCAGTTGATGGGTGATTC
ATCGTTTTATGAAGAAGAAATCATTGAACCTTTCAATCGCGGTCAGTCTA
TAAACACGTCAACCCCGCCCTCCCCTGTATCATTCCGTAGCCGCAATCAC
CATTACAACAGTTCAACATCAAGTGAACCAAGGCTAGCTCTTTTAGCCTG
TCACATTGGTCAACAACATATCGAATTTAACGAGACTGAAGGCGGGTTAA
CTAGACTGGAAGAACAAGTGGAGAAACTAGGCAAAGTGACTTGTGACTTC
GATTTGAAAGTCAAACTGGATAGAAATTTGTTAACGTTAGATGAATTTCC
ATTTGGTATGAAAGTTGGTGGTAACGATTCCTTTGAGTGGCAACCAAGTC
AACCTAAAGTTCTGCTACACGGAACGAATTCTTATGTCCACTTGATCGAA
CCACAATCGCTGTCCCGCCTCTCGGAATGGATGCGTTTCCGCCGGATAAC
CGCATGAAAGAATTGGAAAACATTCGAATTGATCTAGAACAAAGTCTTGT
TTTGGAAGACCCTGAAACCGCAGATCTTGACATTAATTTGGAAAGTTTGA
ATAAGGGAGTCAAAGATATTGAACATTCATCAGCTATGGCTCAACACGAA
GTCAATACCATGTTCGAAGCTATTCAAAAATCTTTGAAAAAGAAACAGGA
TTCTTTCATTCAAGATATTCGACGTAAAAGTCGACGTCAAATCAGTTTGT
TAGAATTTGAAAAATTCCGTCTAATCGAGACAAAGAAATTTCAAAACGAG
CAGTTGATGGGTGATTCATCGTTTTATGAAGAAGAAATCATTGAACCTTT
CAATCGCGGTCAGTCTATAAACACGTCAACCCCGCCCTCCCCTGTATCAT
TCCGTAGCCGCAATCACCATTACAACAGTTCAACATCAAGTGAACCAAGG
CTAGCTCTTTTAGCCTGTCACATTGGTCAACAACATATCGAATTTAACGA
GACTGAAGGCGGGTTAACTAGACTGGAAGAACAAGTGGAGAAACTAGGCA
AAGTGACTTGTGACTTCGATTTGAAAGTCAAACTGGATAGAAATTTGTTA
ACGTTAGATGAATTTCCATTTGGTATGAAAGTTGGTGGTAACGATTCCTT
TGAGTGGCAACCAAGTCAACCTAAAGGGCTTTGTAGACGATCACCGACTT
CCATTCTAATGGTCAGCAGTGGTAAAAGTGAGGTCATTGAAATGGATAAC
TCATTCAATGTCGTCTGCCGTATCTCTGGACGAAACGTTTTCAGTAACAA
TATATCCGACGTCGCCTCCTCCAACGGTTATATATATGTCGCTGATGCTG
GAGCGTGTCAAGTTGTCATGTTGAGTAAAGACGGCACACTCGTGAAACGG
TTCGGAAAAGCAGGCACTGGTGCACAAGAATTTAAACGACCCAACGGCCT
TTGTGTTGATAGTAAAGGAAGAGTGATCGTGTCTGATTCACTGAACCACC
GTGTTAAAGGCTTTGTAGACGATCACCGACTTCCATTCTAATGGTCAGCA
GTGGTAAAAGTGAGGTCATTGAAATGGATAACTCATTCAATGTCGTCTGC
CGTATCTCTGGACGAAACGTTTTCAGTAACAATATATCCGACGTCGCCTC
CTCCAACGGTTATATATATGTCGCTGATGCTGGAGCGTGTCAAGTTGTCA
TGTTGAGTAAAGACGGCACACTCGTGAAACGGTTCGGAAAAGCAGGCACT
GGTGCACAAGAATTTAAACGACCCAACGGCCTTTGTGTTGATAGTAAAGG
AAGAGTGATCGTGTCTGATTCACTGAACCACCGTGTTAAAATCTTGTCAC
CGGACCTGAAGACCGTTATCCTCACTATCACAAACGACCGGAAAAAGTAT
AAAGAAGCCGGGCGCTTCAGTTTCCCGTATGGCGTAGCGTGTGACAAAGA
GGATAATATCTACATCGTGGATACGAATAACAAACGCTTAGTACAAATCA
GTAAAGATGGCAAATTCTTGAAAGAAATCTACCCAGCAGATCTTGTCACC
GGACCTGAAGACCGTTATCCTCACTATCACAAACGACCGGAAAAAGTATA
AAGAAGCCGGGCGCTTCAGTTTCCCGTATGGCGTAGCGTGTGACAAAGAG
GATAATATCTACATCGTGGATACGAATAACAAACGCTTAGTACAAATCAG
TAAAGATGGCAAATTCTTGAAAGAAATCTACCCAGCAGACATGGCAGATC
CTCGTTGTGTGGCCGTCACGTCCGACCATCGTATCTTAGTCACCGATCGT
GAGAACGCTCAACTATTGATCATTGATCTTCACACGAACACGACGACACG
CGTGTCGGGAATCACGGACAGTCACGGTCGTGAAATCACCTTCAAACAAC
CGTACGGTGTTGTGGTTGATGGTACGGATAAAGTTTACGTTTCGGATATT
GAGCGCAATGCATTATTTGTACTGTAAACATGGCAGATCCTCGTTGTGTG
GCCGTCACGTCCGACCATCGTATCTTAGTCACCGATCGTGAGAACGCTCA
ACTATTGATCATTGATCTTCACACGAACACGACGACACGCGTGTCGGGAA
TCACGGACAGTCACGGTCGTGAAATCACCTTCAAACAACCGTACGGTGTT
GTGGTTGATGGTACGGATAAAGTTTACGTTTCGGATATTGAGCGCAATGC
ATTATTTGTACTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1774507..1779614 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1522-1758:238 |
| Aaloc | 1321-1518:1716 |
| Aaloc | 991-1320:2492 |
| Aaloc | 223-987:3826 |
| Aaloc | 1-219:5109 |
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