|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:2067358..2072229+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041621 ID=XLOC_041621|Name=XLOC_041621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4872bp|location=Sequence derived from alignment at sc0000006_pilon:2067358..2072229+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTCGATGATACATCTGAGAACAACAACACTGTCGATAGTAGCGATGG
ACTTTTCAATGATGCGATCACAAATTATTTGAACGCTTTGAAAGTAAGCG
AACGACGTGCCGAGAGTGTTTTACAAGAGTCAAAAGAAAtcgtttctttt
gttgaaaattgtaAGCCATTCGTACTAGTTTTTGATTAATTGAAATATTG
ACATTCTCATCTCCTGATGCTGTTAAAATGCCTTCTGAGTAGAGTCTTTC
ACAAACAGTCAACTCTTTcttattcgaacctctattattatTTTACCCGC
TTTATTATTTTGTCCGCTCAGCTGGAAGGTCGTATAAACACTCTCCgtat
ttcgaatttttctcttattcgaaTGAAATTTATTGgtctcttgaagatcg
aattagagagagtcaactgtatctTCAAATCTGCGCTATTCAGAGTCTTT
TGAGTCTACTAGATGTTCCTACTAATGTTTTAACTtctattattatatac
ctgtaggcaaaaacagccattgaataattcctaatataccatggctatta
taccacggtagaatttttggacctaccctggtgggctgtaggtcctataa
attaacctctgttcgttcgttcgtccgttcgtccgttcgtccgttcgtta
ctagcttttctcgggattggctcattagtttttcctaatttttggcacaa
agatgcaaaatggtaatgcccaaaatgtgacggagcccgattttcgaaaa
aaattcattttcggccgaaaatgccggaaatatgccggaaaaaccggttt
tttggcattttctcgagatttcatcattagttttttctgattttttgcac
aaagatgcgtattagcaatgcctaaaacatggattagtccgattcttgat
aaaaattctattccggctgaaaatgccggaaatatcccggaaatcgccgt
ttttgcagattttcattggactttttccttatatttcgttggtttttttt
ttcacacaaaaacatatttgtagcaatgcccaccatcaagcatggttttt
AATTGTcattaaaagtgatttttgaagccggaactttctaaaaatcgccg
gaacagcctattttcgccggaaaaacggtatttcttgaatttctcgagct
gtactttatattttttcatgaaattttgcacactgatgcaaaatggcaat
acctaaaatatgacagagcctgattttcaattaacgtacttttccggccg
aaaatgccggaaatatgccggaaaaaccggttttttggcattttctcgag
atttcatcattagttttttctgattttttgcacaaagatgcgtattaaca
atgtctaaaacatggccgagttcgatttttgagaaaaattctattctggc
tgaaaatgccggaaatcgccgtctttgcagattttcattatatgttttcc
ttgtatttctatgttcttcacacaaaaacattattgataacaagttcacc
atcaagcatgattcaattgtcaataaaactgatttttgcgaccagaactt
tctattaatttttccctacaacccttccctgtcccccatcaacaatcaat
gatgaatttattgcgttatgcattttcgctaaacgatatattttctgact
gatttttttctcctcgcattgctatctaactttcatcatcaggtaggtcc
attcagcatctagcttgttttttcaaattttgctttcaaagtttgatttt
ttttgtcgtttttgttgttatatcaaagaaattcattaaaataaatctat
tgcaATTTCATGAACAcattttatgactcaaagtaatcaagaaaatcatt
aaaaaataaaaacattcgaacgttcgattatatgggagtgttttatgtga
aaCGTTTAACAATTGACATTTATTATATatctgtaggcaaaaacagccat
tgaataattcctgatataccatggctattataccacggtagaattttgtt
ttcaaattttgagttttttgttgctttggttgttatcaaagaaattcatt
aaaataaatctattgtcaatttcataaacaaattttatgacttaaaGTAA
TTAAGGAAATcattaagaaagaaaaacattcgaacgttcgattatagGAG
TGTTTTAAGTGAAACGTTTAGCTATTGACAtaattaatgttttatttttg
cctctaggtatataataaaacatatattcaataggttttcgttggttatt
ggatttattaaccctcggtgatgtatattcaactcggcttcgcctcgttg
aatattacatcacctcgggttagtaaatctcaataaccaacttttaccca
ttgaatatctgcttattatttgTCGAACTCCACATTAAGAATAATATTGT
GCAATTTCACATACCGAATTTAGGAAAGAAAGGTCATATATATTGATGAG
AAAGGCTTTGTCAGTACGATTCAAGGTCTGCCTCAACCTTTTTAAACGtt
tcagaaaatgaagatgaaaaatgaagaagaattgCTAGAAACTTCATCTT
TCGTACAGGAGAGGTACCTTAAAGTATCCTTCTTGGATTGGTGTTGTATA
AAACTCTATTAATTGAACTATTGGTGACTTTTAAAGGTTTGCTTTTCACA
TCATCTTCTTGAGCTTCCCTTTGTACATCTAGCGAACAGAAAGACATCAA
CAGAGGAATTGCTGAAGAGAAAATTGCAAGAAGAATTATACatcgaaaat
gaagatttaattTCATTACGTAACACTGTAAGTCAATCATTGAAGAGGGT
TGCGCCAATGAAATCTATAGCCCAGTGTGGAAACGATGTAAAGTCCACGC
CGAATTGTTATTTGTTTAAAATGAGGTCTACaacaaaaaaatccgaaatt
gCAGGGGGGCTGTAAGCCCTCCAAACGGGTCCAGGGCTGAGAAGCCCCCC
AAAATCACCATTTCCACGCTGGTCTATAGCTTATTTTATTTATCCTGATA
GAGATTTTATATCTATCTTATTAGTTGGCTAAAAATAGGCTAGAGTATGT
ATGACTCAAATGGTCAGagtgaaaaagaaatctttcttttgtcatggaga
cattcgagttatagaggttctaCTGTAGTACCAAAGCGTAATGAACTAAA
TTTTTGGAAGGATGACTAAATTTCATGTCGATTCATCTCAAAGGAGGGTT
ACGCATAATACCGCGTCCTTACCTAGCATGATCAAACTTTCCACAGCTCC
CGATGTCCAATTGTGGTTGGAAATTTTTCCTTTAGAGCAGCCTGTATCAT
CTCTCAGTAGTTGATTGATGCTTAGGTTTTGCAATGGCCACCACGTCATC
TTTTTCTCAGTAGAAGGTTCCAATTAAAGTTCTACATTTATTAGTATGGT
CCGCCAAGATTCACTTGAGATTCTTTAGCATAGTTATAGttaatagcgag
attatgtatctggaattctctacggctacggttagagtggcgagggaaat
ggcgagtaaggcaagtaatggcgggtgaaagcaagttcgatatttaacgt
acggcattatgtcgactttgcttgtacggtgttttggtgtttttcccgta
cagagcaaagtagacaacgacatgtcacctttggtgacgacccgtatggg
tagccccgcaaccgtagtcgtagaatatctccgatacataatctctctAA
TGCACTCTTATCAGACGTTATACTCTTCAATACGCTCATTtgtgaaagtc
accgtcaacaagaactTCTCATAAACGACACCCCTTTAAAATCGAATAAA
AGAGAGCGCCAACTGTATTTCTAAATGCATTTTTCTTTGCAGGTTTTGAA
AGACTTGGAgaaagaagaggaagaagagAACCACGTGGCTGTCAAACAGG
AGAAGAATGATGATACCGTTACTACCGCTACAAGTGAGGAAGAAACTATT
GATGAGATCaaaacattggaagaacaaacagaaaaagaactgaacgagtt
gacggaaaaacaaaatgaagaagCTGAATCTAAAaggttgattttctttt
tttctagtgAATGATTGAATGTACATTTGATAATAATATTTCTGTCAATT
TAACTATTTGTCAATGCATCAGGAAGCTAAGCAAACAACTTACGTTTATA
GCTTAAACTTGACACTATAGTATATATACACATTTGGTTGAGCATCCACC
TTGCAGTCTAATGGTTATAAGTACGACTGCCGCCAACATAGAGATTGGGT
TGGTTgtattgggtaatctgatctacaATCAACCTCTAAATATATTGATA
ACTATGGGTATTTTAAAGTCGTTCAGAATTTAAATGGTCGGGCAAGAATT
GCAATTTCAGTATGTCCTTTTCATAGGCTTTGTGAAGGGGTTTAGTGGCT
TCTCATCCTTATTCCCTCATATTTGAACTTCTGGATCTCGAGATCCTTAG
TTCCATAGTCCAATGTTAAATCTCAGAATTCAAAATCTACCTTCCAGAAT
TATATTGGAACtttttgcagtttttaaaatttttcagggaatttcccttt
tttcaaatattatgactttcatTACTGTAGCAGTAGCAGAGCTAAAAAGT
ATGTGCGGAGCTCCACTTCGAATTCGATTCCCAGGTCTAGCGCGAAGAGA
AATTGGGATAGATGCTCTCACTTCCTGCTATGtagacagccaccagatga
agaATATTTTACAGCCTGActttattttttcctctttcatCAACCTCGCA
GGAAAGTCACAGAAAAGCTTCGTAAAGAGTCTATCGTCAACGACCTTCTA
AACGAAGAAAAAAGACGAAAACATCAAAGCTTGATCGAGATATTTCGCAC
GAAGCAGGAGGAAGAGCAACAG Coding sequence (CDS) from alignment at sc0000006_pilon:2067358..2072229+ >XLOC_041621 ID=XLOC_041621|Name=XLOC_041621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000006_pilon:2067358..2072229+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTCGATGATACATCTGAGAACAACAACACTGTCGATAGTAGCGATGG
ACTTTTCAATGATGCGATCACAAATTATTTGAACGCTTTGAAAGTAAGCG
AACGACGTGCCGAGAGTGTTTTACAAGAGTCAAAAGAAAtcgtttctttt
gttgaaaattCAGGTCGATGATACATCTGAGAACAACAACACTGTCGATA
GTAGCGATGGACTTTTCAATGATGCGATCACAAATTATTTGAACGCTTTG
AAAGTAAGCGAACGACGTGCCGAGAGTGTTTTACAAGAGTCAAAAGAAAt
cgtttcttttgttgaaaattCGAACAGAAAGACATCAACAGAGGAATTGC
TGAAGAGAAAATTGCAAGAAGAATTATACatcgaaaatgaagatttaatt
TCATTACGTAACACTCGAACAGAAAGACATCAACAGAGGAATTGCTGAAG
AGAAAATTGCAAGAAGAATTATACatcgaaaatgaagatttaattTCATT
ACGTAACACTGTTTTGAAAGACTTGGAgaaagaagaggaagaagagAACC
ACGTGGCTGTCAAACAGGAGAAGAATGATGATACCGTTACTACCGCTACA
AGTGAGGAAGAAACTATTGATGAGATCaaaacattggaagaacaaacaga
aaaagaactgaacgagttgacggaaaaacaaaatgaagaagCTGAATCTA
AAagGTTTTGAAAGACTTGGAgaaagaagaggaagaagagAACCACGTGG
CTGTCAAACAGGAGAAGAATGATGATACCGTTACTACCGCTACAAGTGAG
GAAGAAACTATTGATGAGATCaaaacattggaagaacaaacagaaaaaga
actgaacgagttgacggaaaaacaaaatgaagaagCTGAATCTAAAagGA
AAGTCACAGAAAAGCTTCGTAAAGAGTCTATCGTCAACGACCTTCTAAAC
GAAGAAAAAAGACGAAAACATCAAAGCTTGATCGAGATATTTCGCACGAA
GCAGGAGGAAGAGCAACAGGAAAGTCACAGAAAAGCTTCGTAAAGAGTCT
ATCGTCAACGACCTTCTAAACGAAGAAAAAAGACGAAAACATCAAAGCTT
GATCGAGATATTTCGCACGAAGCAGGAGGAAGAGCAACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:2067358..2072229 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-570:4753 |
| Aaloc | 256-447:3843 |
| Aaloc | 163-255:2685 |
| Aaloc | 1-159:1 |
|
