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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1848087..1850466+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041616 ID=XLOC_041616|Name=XLOC_041616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2380bp|location=Sequence derived from alignment at sc0000006_pilon:1848087..1850466+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAAC
GCGTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGAC
CGCGATCAAAGAGACAGAGTCCAACAAGCTCGACtggtatttatatttta
ttcttCTTTAACTTGGGAAAACTATTTGGAAACTATAGTTTGGTCTATTT
GTAGCTGCCACTGCATATGTCAGCTATTTTTTCCTAGTCGATTCCTCCTA
CAAGCTTCTATTGTTTCTTGTTCACGTTCAAGATTTGGCAAGGTTTTTAG
TTTGAACTAAATTCATCTAAGAAGCATGAATATGAACGAGTAAAACAATC
TTGACCTCAGATAAGGTCAGGAAATATAGTCACAGTTCAAGGTCTGTGTC
TACATAAAAGTCAGCAAGATGATCTTATAACTGATTACAGAAGTTATGAA
TGCTGCGTTAATTGAATTATCTGGATAATGGGTACCTAATCCAATAAAAT
TATGTCTTTGATTCCGTATTAAAACCTATTAGAATTGTCATGTTGACCAT
CAAAGTATAAAATCAAACTTTAAATTGATAGATTTAAActtaattttctc
aaattttgctcAACTTTTCCGAATTACTTGAAATCATCGATATGCTAACA
ATAACAAGGGaaggaaaatattcttatttctcACTGAATTACGAATTCTA
GGTGCGGCCTGTAGGGCAGCTTTTATCTTTGAATAGCAGATTGAACAATA
AGCTAAATTCTTTGGCAGTAAGAGGTTTTCTGATCAATGTTTTGAAGCTT
AAAGAGAATTATTGctctcttttttttcattttggttaGAAAATAGTGTC
TTTCTCTCAATCAAatcattcaaaaattgaataaaatcacaaaatcgTGC
AATTATATTTTACATCATGCAATTTTATGTGGACAGGTTTTTATGCACGG
CATAAATTAAAGGATAATTTACAGGTCATTCTATGTAGGCTCATCTACCT
AGATGGAATGATCATCAATGAACCTTATAAAACGATATTAACTTCCGTCA
CTCATTCTAATTTATTTGCATTAGTTGTCTTGATTTGTCACTTTCTATTA
AATCCTAGTCAAAATTGGTCGCTGCTAAGTTGAAACCTTGTCGTAACAGG
ATATTAGGCCTTCCACAATATTTATCTTAACTGTTTCAATAACTTTTTCA
TCCCAATAACTTGTTTTTCCTACTTAACTTCAATTCCTTCAATAAATAAA
catcattcttttgttttctttcctttacAGAAGCGCTACCATTACTGAAG
ATTTTGATCCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGAGGCAC
AAACATAGGTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTTGTCGC
CGAGCAGAGAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTTTAACT
GGCGAAGTCAATCAAATTATCGACCTGAATAACTACATTATTGATAAAGT
GCACATTGACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGAAGAAC
GCggacaaaaagtcaaaatagtcGTTCCGAATGCCACAGCTGGACTTGTG
ATCGGCCGAGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACGGGAGC
TAAAATAATGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGAACGGA
TTATCACGATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGCAGAAA
GTTGTTGCCAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAGAATTT
GACGTATTCTTCGACGCAAGTACGTAACGGATACGGTAATAAACATTTGG
AAATGGGTCCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAGTTATC
GGAAGTTTGCAAAGTCAACATTCGATGAAAACAAGTCAAAATATCTTATC
GTCAATTGCTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACTTGCCA
ACCAATTAGGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGATACCA
GGCACTACATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGTAGCCT
AGTAGCAAGTATTAAAACTCAAGTCACAATACAAATGGAAATCCCTGACA
TCCTAGTCGGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACGAATTT
ATCCAGTTCAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGATTTTGC
ACCGGGAACTACAGATCGTATTTTGACCATTCAAGGCGATGTAAATCAAA
CTCAGATTGCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGGAGAGT
GAGCTCGCTTCAGGAATACAAAGGCATTGA Coding sequence (CDS) from alignment at sc0000006_pilon:1848087..1850466+ >XLOC_041616 ID=XLOC_041616|Name=XLOC_041616|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000006_pilon:1848087..1850466+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAAC
GCGTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGAC
CGCGATCAAAGAGACAGAGTCCAACAAGCTCGACtgATGAACTTACTCAA
CATGGCTGACGTCTTGGAGAATAATGTGTTTTCAACGCGTAAAAGATCAC
ATACAGAAAGTACAGagacaaatgaaaatgacaGACCGCGATCAAAGAGA
CAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTACTGAAGATTTTGAT
CCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGAGGCACAAACATAG
GTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTTGTCGCCGAGCAGA
GAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTTTAACTGGCGAAGT
CAATCAAATTATCGACCTGAATAACTACATTATTGATAAAGTGCACATTG
ACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGAAGAACGCggacaa
aaagtcaaaatagtcGTTCCGAATGCCACAGCTGGACTTGTGATCGGCCG
AGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACGGGAGCTAAAATAA
TGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGAACGGATTATCACG
ATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGCAGAAAGTTGTTGC
CAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAGAATTTGACGTATT
CTTCGACGCAAGTACGTAACGGATACGGTAATAAACATTTGGAAATGGGT
CCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAGTTATCGGAAGTTT
GCAAAGTCAACATTCGATGAAAACAAGTCAAAATATCTTATCGTCAATTG
CTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACTTGCCAACCAATTA
GGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGATACCAGGCACTAC
ATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGTAGCCTAGTAGCAA
GTATTAAAACTCAAGTCACAATACAAATGGAAATCCCTGACATCCTAGTC
GGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACGAATTTATCCAGTT
CAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGATTTTGCACCGGGAA
CTACAGATCGTATTTTGACCATTCAAGGCGATGTAAATCAAACTCAGATT
GCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGGAGAGTGAGCTCGC
TTCAGGAATACAAAGGCATTGAAAGCGCTACCATTACTGAAGATTTTGAT
CCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGAGGCACAAACATAG
GTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTTGTCGCCGAGCAGA
GAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTTTAACTGGCGAAGT
CAATCAAATTATCGACCTGAATAACTACATTATTGATAAAGTGCACATTG
ACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGAAGAACGCggacaa
aaagtcaaaatagtcGTTCCGAATGCCACAGCTGGACTTGTGATCGGCCG
AGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACGGGAGCTAAAATAA
TGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGAACGGATTATCACG
ATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGCAGAAAGTTGTTGC
CAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAGAATTTGACGTATT
CTTCGACGCAAGTACGTAACGGATACGGTAATAAACATTTGGAAATGGGT
CCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAGTTATCGGAAGTTT
GCAAAGTCAACATTCGATGAAAACAAGTCAAAATATCTTATCGTCAATTG
CTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACTTGCCAACCAATTA
GGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGATACCAGGCACTAC
ATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGTAGCCTAGTAGCAA
GTATTAAAACTCAAGTCACAATACAAATGGAAATCCCTGACATCCTAGTC
GGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACGAATTTATCCAGTT
CAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGATTTTGCACCGGGAA
CTACAGATCGTATTTTGACCATTCAAGGCGATGTAAATCAAACTCAGATT
GCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGGAGAGTGAGCTCGC
TTCAGGAATACAAAGGCATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1848087..1850466 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 139-1236:1283 |
| Aaloc | 1-135:1 |
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