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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:172943..175769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041606 ID=XLOC_041606|Name=XLOC_041606|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2827bp|location=Sequence derived from alignment at sc0000113_pilon:172943..175769- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAAGACTCAAAGACCAATTTTTTATGCAAGATGGGATGTGGTTT
TTTCGGAAACTCTTCTTTTGATGGTATGTGTAGTAAATGTTATAAAGACC
ATCTTAAACGTCAACAACAACCATCACCATCAGCTGGCCGCACTAGCCCT
GGAACTGCAGGTTAGTAAAATTTTAGCTTTTAGTTCATTTTATTCGTATG
TTATTTTTCAGCTTTGCTTCATATTAAAGAGTTGACCTTTGAAAATCACA
TTGTCTTAATTTTGCTAAGGAACTCTTTTAGTTGAACTTTTGCAAAAATT
TACTCTCGAGTTTGACAATGATTCATTTTAAGTCATCTTTAGTATACAGA
TAACTTATTACATATCACCTATTCTGAGAGCATTTTTTTCAATAAAATTT
TATAAGATTCAATATTTGAGAGAACTGTCCTCCCAAAGTGAAGTGTTACA
GTTGTTTTGAATGTCATAGTTTTGTATTTTCGTCACTTCTTTTCGTAAGG
ATTTGTTTTGTTTTGGCTTGTTTAAGTAAATTAATGATTTTTTGTGTTGT
TAAGATGGGACATTTTTCTAATCAATAGAATGTGATTAGACACGATTGAA
ACAGTTATTGAATTCTATTCCTACAGTGTGACAGACTTTTAACTGATTTT
TATGATTGTTATTTTGTATTGAAATATTTCTGTTCACAGCGATTTTTTTC
TTTCTCTCTTGCTTACCAGTCACAACATCAATCCACAGCTCAAAAGCCTG
AATTTCTTTTAGTTAAAAACAGGAGGTTATATGAATTTTTTCTCTCATCC
CACATCACACAAAATGATTTTCATAATTTATCCTACTATCCTCTTTTTCG
TCGTTGATTATGTATACATATTTGAATGAGAAAAGGTTCTGAATAATAGA
TTATAAAGCTTAAATATGGGCTAATATCAGAATCGATCGAATCATAGCTT
GCTTTCATAATCTTAAAAAAGAATTTATTTTCTATATCGTTGTATTGTTC
TCCATGGCATTTCTACTTAATATTTTAAAATCTATTTAGATACATGAAAA
GTTATTTTATTAATTTTTGATTAATATTTTTACATCAATAGGATCTATCG
GTAGCATTATTGCCAATAGTCTACCTACACCATCACCCAGCCTCCCAACC
GAGGTCTCTACAGCTACAACAACTGTTGCCCAGGCAACCCCACCAATCAA
TATTCCATCATCAAGCACTGGTCTAAGAACACCAGAAAAAGGCCTCGCCT
CAGCTTATGTCGAAGAAGATACCTCACCGAACCCAGAATCACCTTTGGGT
GAGAGCCTCGATTCAGCATCCCCTGGTAAATTAAAGAAACGAAATCGATG
CTACTCTTGTCGCAAGAAGGTCGGACTTACCGGTAAGTGACATTTTACTT
CGTTTGATTGGTACTTATTTTACATGAACCTTCATGTTTATCATAATGGT
CAGTTATAAGAAAAAAGTAGTGACAAGTAATATAATGAAAAGTCTTAAAA
GATGGTTAACGCACTTGAAACTTTGATTGAGCCCTTCGTAACGTCCTGGT
GTTTTAGGAAGGGTTCCGTTAAAAGATGACGTCATTGATAATCATGAATT
TATTGTGTAAACAAGGATATCCATGATTTAATAAAATTCATAGTTTTTAT
GTATTTTTTTAACTTTTACACGCAGATTGTTTCACATACAAACAACATCT
CTTGTACATTTGAACAAGTGCAGAAGCACGAAACTTTAAGTTATGTACTT
TTATTGAAAGAAAACTTTAAAATTTTAGTTTTTATGTATTAATGAAAGCT
TTAAACCGTTGAGCCATTTCACTAGATAAAGAATTTGGACACATATTATC
ATTTAGACTAGTTAATCATGCGTACACAAGACACAATAGGAATTAATGAT
AGCATAGCGCAAATAGCCCTCTCTGATTGAAACAGTTATCTTTGCTTGCT
GGCGTGTCAATGTTTACGCTCAATAATGTTACACGTTTTTTTTTTTATAA
GAACGTCAAAAATTTTCGAAGCCTTCGGATGTTCTTAGTTTTTTGGATTT
GAAGCCTAAAAATGTTCTTAAAATGTTCTTATTTTCAGCATTTTTGGAGC
ATTTTGATGTAATTTCTTAAGAAATTGCATGTTTTTAAGTCTCCAAAGCC
TTAGTATGTTCTTAGAATGTTCTTAAATTTTTGGGCCTCGAAGCCTTATG
TTCTTATATAGTTTGTTCTTATAAAAAAAAAACGTGTATCGACTCTACTA
TTGAAGATATGATTTATCCAGCTCTGTTATTTGACGATGAAAATCTTGAT
AAAGCTTGTTTGTTTTTCAAAATTCTATATTTTGGAAACCAAATCAGCCT
TTGCTTGTCAATTGTATATATGAATTTAAATCAATGTTTTGAGTCATGAC
TTTGTTGATCGATGAAAATCTTTATCTCTATATGAACTAAGAATAAATAG
CGACCTCGAAATACGGCGATATATCGTTTAAGACCGCAAGCAAACCATGT
TTTTAGATAAAGAAACTTGTATATGCATGTTATCTGTCATACAAACAGAA
AATTTGTTTGGCATAGACTTCCCACTTTTTAATCTGGTATTTTCACTTTT
TAGAGCTCATATCAACAGTGATTTGAGTGCTTTGTTACCTTAGCAACGAA
CTAATTCATGTTTATGCTTTCGTCATAGGTTTCGAATGTCGATGCGGTGG
ACTTTACTGCGGAATTCATCGATACTCAGATAAACATAATTGTACTTTCG
ATTACAAAGCTGATGCTCGCGAACAACTTACTAAAGCCAATCCAGTCGTC
GTTGGAGAGAAAATCAAAAAGATTTAG Coding sequence (CDS) from alignment at sc0000113_pilon:172943..175769- >XLOC_041606 ID=XLOC_041606|Name=XLOC_041606|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000113_pilon:172943..175769- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACAAGACTCAAAGACCAATTTTTTATGCAAGATGGGATGTGGTTT
TTTCGGAAACTCTTCTTTTGATGGTATGTGTAGTAAATGTTATAAAGACC
ATCTTAAACGTCAACAACAACCATCACCATCAGCTGGCCGCACTAGCCCT
GGAACTGCAGATGGAACAAGACTCAAAGACCAATTTTTTATGCAAGATGG
GATGTGGTTTTTTCGGAAACTCTTCTTTTGATGGTATGTGTAGTAAATGT
TATAAAGACCATCTTAAACGTCAACAACAACCATCACCATCAGCTGGCCG
CACTAGCCCTGGAACTGCAGGATCTATCGGTAGCATTATTGCCAATAGTC
TACCTACACCATCACCCAGCCTCCCAACCGAGGTCTCTACAGCTACAACA
ACTGTTGCCCAGGCAACCCCACCAATCAATATTCCATCATCAAGCACTGG
TCTAAGAACACCAGAAAAAGGCCTCGCCTCAGCTTATGTCGAAGAAGATA
CCTCACCGAACCCAGAATCACCTTTGGGTGAGAGCCTCGATTCAGCATCC
CCTGGTAAATTAAAGAAACGAAATCGATGCTACTCTTGTCGCAAGAAGGT
CGGACTTACCGGATCTATCGGTAGCATTATTGCCAATAGTCTACCTACAC
CATCACCCAGCCTCCCAACCGAGGTCTCTACAGCTACAACAACTGTTGCC
CAGGCAACCCCACCAATCAATATTCCATCATCAAGCACTGGTCTAAGAAC
ACCAGAAAAAGGCCTCGCCTCAGCTTATGTCGAAGAAGATACCTCACCGA
ACCCAGAATCACCTTTGGGTGAGAGCCTCGATTCAGCATCCCCTGGTAAA
TTAAAGAAACGAAATCGATGCTACTCTTGTCGCAAGAAGGTCGGACTTAC
CGGTTTCGAATGTCGATGCGGTGGACTTTACTGCGGAATTCATCGATACT
CAGATAAACATAATTGTACTTTCGATTACAAAGCTGATGCTCGCGAACAA
CTTACTAAAGCCAATCCAGTCGTCGTTGGAGAGAAAATCAAAAAGATTTA
GGTTTCGAATGTCGATGCGGTGGACTTTACTGCGGAATTCATCGATACTC
AGATAAACATAATTGTACTTTCGATTACAAAGCTGATGCTCGCGAACAAC
TTACTAAAGCCAATCCAGTCGTCGTTGGAGAGAAAATCAAAAAGATTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:172943..175769 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-600:148 |
| Aaloc | 163-450:1735 |
| Aaloc | 1-159:2828 |
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