|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:186246..190957- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041605 ID=XLOC_041605|Name=XLOC_041605|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4712bp|location=Sequence derived from alignment at sc0000113_pilon:186246..190957- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAACGAATATGAATTCAAAGTGATTATGGTTGGGGATGCAGGCAT
AGGCAAGACAACCATGATAGCAAGCTTGATGGGTGATCCTCTCCCTCATA
CTTACGTACAAACTCAAGGTATTGAAATACTCTCTGTTTTCCTTCCTTGG
ACTTAAAATAATGTAACAATTAAGAATAACAATCTTTCCTTATTTGATTG
TTTTGACTCCCATTATACTGTTCATAGCCCTTATAACGTTATTTCCGCAG
GGTTGTGAATGGTACTAAAAGCACAAAAATAATGCAAGTAAAAGCTAAAA
TCAGTGCATTCAGAACAAAACAAGGGACTTTCATTGTTTCAATAAGATCG
ACATATTGAATAAACAAAATGGCATTATTCCACTATCAATTTTAACTTTT
ACATGAATTTTGTTTTGCTTTTGACATAATATATATCATTTTCATTTTTA
GGGACTAAGGTTAGCAACTATGTAACAGAATACAGAGGGAAGAAAGTTAC
ACTAAAACTATGGTAAGAAAGTCTCCCCTTTTCATTGAGTCTCATCGATC
AAAAAAATCATTGTCTGTTGAATTACATTTCCAATTAAGTATGAATTTCA
AATCTGCAAGATAGGACATTTTGTGTGACCCTCCTGTTTTTACACTTGTT
ACCTGCATGACAATAGTTTCGAATATAAAGTCTCCACATACTATTGAAAC
AGATTGTAGAATTCTTCAAACACATTTCGGATAGACCTTAGATAGTAAGA
TTGTTTACTTTTCTTTTCCAGGGATTTGTCTGGTGGGGATACATATAGAA
CTTATGTAGCCGGTTGCTTTGGTGGTGCTCATGTAAGTCAAATATTTATA
CTTTCTCTTATAAATTTTGTATGTAGAAGGGAAGAGAGCTACAGTGCTAA
TGTATAATAATCGTTATATTTTTCCCTAATGTTTCACTCAGGATTAACAC
ATTTCATCCAGAAGCTATGTATATTGCAAGCTGGCAGAGAGTATAAACCT
TTCTGTAGACCTTTCTAGGGAGAAGACCCTCTCAAAAAACTACCTGACAT
CTTTTGTAAAAGAGTAGATGGCCATCAGCCTATGTAACATAATTATTTGT
TTTAATTTTAGGCAGCTATAATTGGATACAGTATGACAGACAGTGAAACA
CTGCTCCATTTGAGGGATTGGCATGATATGATGAAAAATGTAAGTAAATA
ATTGATAATGATAATTGAAATCTTTCCATTGATTAAATGTAAAACAATCT
ATATTATAATCCGAACTCTCACATAAAGCTTTTTCGCTAGCTGTTTTTAG
CACACGGCAACTCTTTTTTGCGCCTTTTCTATATTTGATCTTTCAATTGG
CAATTTCAACATGTATTTTCTTTTCATTTTTTCTAATCTTCTTTTTTGAA
CATTTTCAAGAGCACTTTGAAATTGAACAATCATTCTCTTTTTCTTTTTC
ATTAAAATCAAATATCCAACTTTCAAATTTTCAAAGCTATTCAAAGTCTT
TCAAAATCACTGTCGAATGCCAACCCAGGATGGCTAGCCACGATGGCTGA
ACTGCTCGCATAAGAATTTTACATGGTACTCTTGCTTGTGGTAGATTTTA
GCAATACAAGATATTTTTCCTTGTCCCTAAATTAAAAAATATGGCAGTTT
CCATTCGATATGCTTTCAAAATAACTCCATTTTTTACCTTTCTTGCAAAA
TCAGCTTGGTGAAAGTAGCAAAAAATTAATTTAGACAATTTTCTTGAAAC
ATATCAAAATCATCTTATCTAATTTTTTCCTTGGAAAATGCAAGAAATTG
TCTTGGTAGATTTTCCTTAAGAAATACAAGAATCTGCTTTAGGTTGTTTC
TATTACCAAAAAAAAAAGAAATGTGTTTTTCAGGAAATTATTTTAATTAA
TGTTCCATTCGATATACAAGAAAATATTGTAGTTCTTTTTGGAACTACCT
GGAGGTCCTATAAATTAACCTGTGTTCGTCCGTTCGTCTGCTGCCAACTT
TTCTCGGGATTGAAACATAGGAATTCTGTGATTTTTGGTACAAAGGTGCA
AAATGGTGATTATCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAGAAT
TTTTGGGCCAATTTGGGACCAAAAATTGGGTTTTTTGGACTTTGTGAAAA
ATCTGTTCATTAGTTTTTCCTAATCTTTTGTACAAAGACGTAAAATTAAA
TTGTGCTAAATATGAAAAAGGTCATTTTTCGAAAAAAAACATTTAGGCAC
CAACTTGCAAAATTTTAAATTATTCAGTTTTTGTTTCTACATGGCTTTCA
TTAAACAGGTAGGTCCGTAAAAGTATCGCTTGTTTTCCTTGGAAAATACA
AGGAATCATTTACATATTTCTCATAAGGAGAAAATACATTTAGTTTCTCA
ATAATTACAGCGAGCGAAACGAGCTTGATTATCATAGTAAAGAGCCGTTT
AAGACGACGCCATGACGGCTAGTAAGTTTAGATTTTGCTTTGAGCTGAGC
TCGAGTGCAGACGCATTAGATTAAAACAAACACTCAAGCCTTTAATTATT
TGAACACAATTATTGGAAGCACAACTTTTGAAACGATGCAAACTTTTTCC
TTTATTCTTAGGTGTATGATATAAATGGACCAGACTCATTTGAGAGTTTA
CAAAAAGTTGTTGTTGGTTTCAAATGTGAAAGTAAAGTTGTCACTGTGTC
TTCATCACAGGGAGAAGATGTAAGAGAAAATCACTGAACTTTATAAAAAC
TTAGATGATCCTATCGTCTACAAAAGGTCACTAAGAAGAGAATAATTTAG
GAGGAAGGATAAATTTGAAAATGTAGTTTAGGGGTGGAGTAAGCAGTGGC
GGAGGTGTTTACAGTGTTTGCTCCAGACCCTACCGCCACTATTTTTCCCT
TAACCCTATTCAAACTAGGCTTTTAGGGGCGGTTCAGAACTAGGGGGGGG
CTTTTCCTGTACCACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGGATG
AAATTTGGCACACAAGGTCCTTGTCACGTAAGGTAACTTTTGACAAAAAT
TTTTTGTGATGACGTCACTCATCATGCCCAAAGTGAGCAAAAACAAAAAT
TTTCCATTGTTCTTATAAATAGCTATTGTATTCTAACAAAGGCTTTAGAA
AAAAGTTGCCTGAGTTTAAAATGCTTATTTTATCCTAAATATTCAATAAA
TTACGGTTTAAACGATATATTTGACATTAAAAATAAATTTGTATTGGAAA
AGTGTCAATTTTTGTGACACCTTACTGTCAGAAATGTCATCATGCTCAAG
GTGTGAAAATATTTAGGTGTCAAATTTTTTTTTATTTTGAAGCAAAATAA
AAGTTAAGAATTTACAGAAAATTTCACGGTAAAAGCTCTATTATTTCAGG
AGCTATTACCAATAGTTTGACTTCCGAACAGAAAGAGCCCCCCCCCCCCG
TAGTACGAATAGGGTTAAACCGCCGTGATGGCTGTAAACTGTGTGTATAT
GTATTTCTCGCGTTTACTATCCCTCTAACGGACGATAGCATCGTCTAGTT
TTTCATAATCCCTGAAACCCGAAATCTTTGATTGGTTTTTTTTTTGAAAA
TACCTTAATTGTACCACTACTCAATGTGGGTGTGAATGAACCTAGAACAC
TAGATCTAATTTTCTTGAATACTTGTGAAGTAGCGCTGCTAGATGTTTCA
CAAAGTTTTAACATTGCAATTTTCAAAAGAACTCACGATCAAAGATGGCG
TATTAATTTAGCCTGACCTCTCTAGTGGAGGAAATGTTATCGCTTGCACC
GTTTCAAGTACTATTTTCTTAGTAGCTTTCACCTCCTTTAGACTTCTTTT
TGTTTTCGAATATAGAAGCAGAATTTCTTTCTTTCCTTTCTCTTTCGTAT
CATCAATCAATAAGTTATTTTCGCCGTGATACTCCTCTTGGTTGGAAACA
ACCAAACTGTCTAATTAACATATGTCAAAGATTATGCCACACCATATTTC
ATTTTCCACTACTTTTCAAAGTTGCACTTTTCTTTCTTTCAGTGTGCCAA
GTCACTTAATTGCCCTTATTTCGAAGCAACAAAAGTCGACGATAAATCAT
ATAAAGACGTAAGCCATATGTTCATCTTCCCAATGTCTAGAAATTTTGTT
GTTATGTATTGATGATTCATTTTTTAAGACAATCAATGTTATTACCGAGG
CTGGCAAGTTCTTTCAGATTTTGGTAAAATTATAACATAAGTTTCTTATT
ATTTTCCTTGAAGATTCTTTGGAAGATCCTGGACGCACTTTTTGCTCGTA
CCTCTGTTAAAGTAAGTCTATTGTTATCTTTCTTTGTTTGAAATAATTAA
CATCTTCCCTCGTTGTGCAGATCTTCAGATATTGAAAATAAATATTCGGA
CATCATTTTGAGAATCTAAGGACAACTCGGGTAATTATTTTTAAGGTACA
ATTTATTGGAACACCTGGTAAGCATTGTATTTATTGTGACAGTGAATGAT
GTAATTTTGGTTTTCTTCAGAACTTGATATATGTTCATAATTTTGCGTTA
TAGGATAGAAATAAAGAAAAACTATACTCTGAGCGCAAGAATACACCTCG
AGTCGTTGATGATGATCCTTCACAACCCTTACTAAATAAAAATAAAGCAG
CTCCTCCTCAAGAGAAGCAAACACCAAGTATTTGTGGCTGTGGATCTTGT
GTTATATCCTAG Coding sequence (CDS) from alignment at sc0000113_pilon:186246..190957- >XLOC_041605 ID=XLOC_041605|Name=XLOC_041605|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000113_pilon:186246..190957- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAACGAATATGAATTCAAAGTGATTATGGTTGGGGATGCAGGCAT
AGGCAAGACAACCATGATAGCAAGCTTGATGGGTGATCCTCTCCCTCATA
CTTACGTACAAACTCAAGATGTCAAACGAATATGAATTCAAAGTGATTAT
GGTTGGGGATGCAGGCATAGGCAAGACAACCATGATAGCAAGCTTGATGG
GTGATCCTCTCCCTCATACTTACGTACAAACTCAAGGGACTAAGGTTAGC
AACTATGTAACAGAATACAGAGGGAAGAAAGTTACACTAAAACTATGGGA
CTAAGGTTAGCAACTATGTAACAGAATACAGAGGGAAGAAAGTTACACTA
AAACTATGGGATTTGTCTGGTGGGGATACATATAGAACTTATGTAGCCGG
TTGCTTTGGTGGTGCTCATGGATTTGTCTGGTGGGGATACATATAGAACT
TATGTAGCCGGTTGCTTTGGTGGTGCTCATGCAGCTATAATTGGATACAG
TATGACAGACAGTGAAACACTGCTCCATTTGAGGGATTGGCATGATATGA
TGAAAAATGCAGCTATAATTGGATACAGTATGACAGACAGTGAAACACTG
CTCCATTTGAGGGATTGGCATGATATGATGAAAAATGTGTATGATATAAA
TGGACCAGACTCATTTGAGAGTTTACAAAAAGTTGTTGTTGGTTTCAAAT
GTGAAAGTAAAGTTGTCACTGTGTCTTCATCACAGGGAGAAGATGTGTAT
GATATAAATGGACCAGACTCATTTGAGAGTTTACAAAAAGTTGTTGTTGG
TTTCAAATGTGAAAGTAAAGTTGTCACTGTGTCTTCATCACAGGGAGAAG
ATTGTGCCAAGTCACTTAATTGCCCTTATTTCGAAGCAACAAAAGTCGAC
GATAAATCATATAAAGACTGTGCCAAGTCACTTAATTGCCCTTATTTCGA
AGCAACAAAAGTCGACGATAAATCATATAAAGACATTCTTTGGAAGATCC
TGGACGCACTTTTTGCTCGTACCTCTGTTAAAATTCTTTGGAAGATCCTG
GACGCACTTTTTGCTCGTACCTCTGTTAAAGATAGAAATAAAGAAAAACT
ATACTCTGAGCGCAAGAATACACCTCGAGTCGTTGATGATGATCCTTCAC
AACCCTTACTAAATAAAAATAAAGCAGCTCCTCCTCAAGAGAAGCAAACA
CCAAGTATTTGTGGCTGTGGATCTTGTGTTATATCCTAGGATAGAAATAA
AGAAAAACTATACTCTGAGCGCAAGAATACACCTCGAGTCGTTGATGATG
ATCCTTCACAACCCTTACTAAATAAAAATAAAGCAGCTCCTCCTCAAGAG
AAGCAAACACCAAGTATTTGTGGCTGTGGATCTTGTGTTATATCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:186246..190957 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 541-699:160 |
| Aaloc | 493-540:450 |
| Aaloc | 427-492:671 |
| Aaloc | 319-426:2102 |
| Aaloc | 241-318:3602 |
| Aaloc | 181-240:3941 |
| Aaloc | 121-177:4260 |
| Aaloc | 1-117:4713 |
|
