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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000113_pilon:309819..314107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041603 ID=XLOC_041603|Name=XLOC_041603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4289bp|location=Sequence derived from alignment at sc0000113_pilon:309819..314107- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTTCCACCGCGTGGTGGACATCCTTTTCAATCTTCTCAAAGTTTCG
GAAGGACGTTTCGCTGTCTCAAGTTAAATTTTATACCTTTTCTGTCAATA
TCATGGCACATTGCTGCTGCTGCTCAGTTGATTCTTTGGTGAAAACTCTG
TCAAGTAGCTGGAGATCTGAGGGCAACAAGTACTTTTCACAGGCTCATCA
AGATGGTCTTGCACCAATCATAAAGGAAAGTAGATTACAAGAAGCCATCA
AATTTTATCACAGAGCACTTTCAGCAGCTTGTGAAAACAAAGATGATGCA
GCCTCAGCTTGCAAAAACTTGGCAAAATCTAATTTTGGCTTGATATGCCT
TACTGATGACACAGAGGCTGAAATTAAACTTTTCAAAGAGTGTTTTCAAT
TTTGCAGCAAATCCCTTGAATATGGGCGTGATTGTAAATCACTTGATTGG
CTAATGGATGTAGATGCCCTTTACCGGACAGTATACTTCCTCATCTGTGA
CCAATTTGATGTATTGAGCACAGAACTAAAGATAAATCTTTTTGAATCTT
TGGCATCTGTAGTTTCTGAAAAGGATCGACTCTATCCTGATATAAACCAT
CATTTGGCAGAAGCTTGGCTTAGTGAAGCATGTATGGCTTTAAATGATAA
TGATTTTAAAACAAGTCTTAATGCATTAAAAGAAATGTATAGACCTGTGG
AAGAAGTCAAACGTTACGGAAAACATAGAGATCAATTGATGACAGATATT
GAATGTTTTGAATGTGACATTACAATTCAAATGGCACGCACTGAATCAAT
GCAAGCAATTTCAACAGGTATGAATGTTCAAAACCTATAGCCAATTATCC
ACAATTTAGGCTCTGAAAATTGCCAATTTATACTTCATCATATTGTGTAC
TAAGGGATCCTCGACAAAAAACTTTCGAATTTTTTATCGGCATTGGGCCG
ATAAGGGGGTGGGGGGGGTCCAGCTACATACCGATAAAAAAACAAGTATT
GGGACGAAAATCTTTTCAGCCTATTTCTTTCTGATTTCGTCACAAACTCC
ACTGAAAGCATACAATTTCACTTGCTTTTACCTTCGCGCACAAATTTGCA
ACTTTAAAAGTACAGTTTTGAATTAGCTTTGATGAAAAAACTATTTTTTC
ATTGGCCAGCGTGTTGCCGTTTCCTTCGAAATGTTGCGACTTTATCGTGT
TTTTTTGACTTTCGTTTTGATTTAACAATATCAATGCGGGTATGAAAAAA
CTCAATGTTGGTGCAAAAGAGACACAAATGCGACGATGACGGGTGGGAAG
GCGAGATCAACGTGATGGTTGACATGATTGGAGAAAATTGTGTTTTCGAA
GATGTAAAAGTTGGTTTCGAAAAATTTTGGCCAATAAGAGCAAGGGGGGG
AGGGGGTCTGAAGCTTATCGGCCCAATGCCAATAAAAAATTCAAAAGTTT
TTTGTCGAAGACCCCTAAAGTGAGGTCTGGTAGCATATAAAAACATAAAA
ATACTTCAGATGGTGATAAAAGCGTGAAATTTGGCACAGATGATCCTTAG
AGGGTCTAAAACTTAATTTTAAACAGTAACACCAAATTTTGCCACCTGGC
CACCTGCCAGATGACGTCATCAGGTGCCTGGGCAAGAAAAATATTTTTTT
GAAAATATTCAAAATCTGATGGTTCCAGCGGAAAGAGCATGAAATGCTGA
TGAAAATCGAGGTATAAAACATGCCTTGAAAATTTTCGAGTCTGGAAAAT
TGCGTGGGTTGCGTGGGTCAATATTTTTACGTGGGTCCGTGGGTCAAAAT
ATTGTTTGAGTGGGTCAAATTTTTTGCATGGGTCAAATTTTTTGCTTGGG
TCATATTTTTTGCGTGGAAAATTTTCAAGGCATGTTTTATACCTCGATTT
TCATCAGCATTTCATGCTCTTTCTGCTGGAACCATCAGATTTTGAATATT
AAGAAAAAATATTTTTCATGCTTTTATCACCATCTGAAGTATTTTTGTGT
TTTTGGATAATTTTCAAAAAAAAGTTGAGAATATCCAAATGAAAATTCAC
CATTCTTTTTTAAAAAAGGCTAGTATCTCATGATACACAGCTGAGTTGAT
GTTTTTGTTGCCTAAGATTTAATATCTGCAAAAAATTTCCTTAAATAATT
TTCAATATCCAATAGTTATCGGATAGTTGCGAGTACAATATGAGAAATAT
TTAACGAGTTCCGAGATTTGTCCGTACGATATTTTCTGAGCCTTCAGGCG
AGGAAAATATACGGAAAAAAATCCAGAACGAGTGAAATATTTCCATATTG
TACCAATCAGATTGCTGATATTTTTTTGGATCGCCGATAAGGTTACTTAA
GGAAGGGTAGAAGTAGAAGGGTATATTTTTTAGCATTCAGGAATCAAAGA
TTTTGTGGCTGTAAAGTTGTAATGCACTTAAATTTATAAAATGAATTGTT
GTAGCTTAATTTACAAAATACTATGAAAGTAATTTCAGTTTTTGTTTCAA
AAGAATTTATATTGCAACTTTGTTCTGAGGTTATCAACACTTCTATTATA
AGGTGATACATTGTTGGAGAATCACTTGCTTGAAGATGCTGATTTGAATA
TGGATTTGATTTACACAGTCATCGATTATTACAGACATGCTATGGTCCTC
ACTCGAGGTGTTGAGGTTAGTAAATCTCTCTCTTCTTTAGTTTGCTGCAG
TGTAGTAAATAAGATTGGATGAATTCTTGACTCGTATCTATATATCCAAG
ATGTATTATTAATTTTGGTGGGATAAACTTTCGCTGGAATTAAATTTCAC
AGATTTGGGTGTCATCTGCAAAAATCTGTGAATTATGTTCCAATGGAGAT
TTGGAAGGGCCTCATCCGCAAAATATTTTTAAACAAAACTCAAAATATGT
GAAATAAATACTATTTGAATGATAACTTACATCAAAGTGGCGCAAATAAT
GTGTAAAAGTCACCGAATCATGAAAATATTGCCAATAGTGCCACCTGCGA
AATTAAGTCCCTGCCAAATTTTTGAATTTTGCGGATAGGCCTTTCTGCGA
AATTTAATCCCTGTGAAAGTTTATCACATTAAAGTAATATTTTCAACAAT
ATTGCTTGAAACCAGAGTTCTTTACTACATTAAACTTCATCATTTCACAG
ATTGAATTGGAAGCTATGGCACTCAGCAAATTGGGAAAACTTTACGATCA
GGTTTTGAAGATCAAGCATCGTGCTTCTGATTGCTTCCATAAATGTTTGC
AACTTGCAGCTACACTCGTCCCAAGAGTACTAACGTCTGAAGGTGATTTT
TAAAGTGTTTTAGAAAAGTTTAATAAGAGTAGTGTACTTTGGCTGAGGGT
GAGCATTATTCTTATCTTTGTATTGTTCTAAACAATAGGCCTATTGTTCT
AACTCCGAAATCTCATCCTTATTCTTATAAGAAAAAGCGTGTATAAACCC
TGGACGAAGCAAAATCTAATGATGTGGATGCAATTGCTTCAGGAGCGTCA
TATCTATTATTCCTTTAATACTTGTGATTATATAATGCGTTTTATGTATG
CAAAAAATACTACTTTGCTTTACTTTTGAAAAAAAACTTATCAAATATAT
GTAGATCAGTTTGTCAAACTAAATTTCTGATTTAAGTAATTATCAATTAT
TGGATTTTCTCTTTCTTGTTAGCTTGGTACAAAGTTGCAAATGAAACCCT
TATGAAGTATCAAATGGAAAGCTACTCCCACCAAGAACGAGAAAGACAAA
AGGAACGTCAAAAATATCTCGATGTAAGTTTGTTATCATCATCATCCAAC
GTTTTTGGACCTACCTCGGAGGTCCTTAAAAGACAGTACAGTTTAAAAAA
AAGTTTAAGCTAAATTGCGGCCAAATTAAGATATTCTCCTTGACATGCTA
TGGAGACTGGGCTGATTATATCTAATCACTAAAAACTTGTTTTTATACAC
ACACAGGAGCTGAAGACTGAGCTGAAGGAGATTTCTGAAGCAAAGAAGAA
ATGGAAAGAGCAAGGTGGAGAATTCCTTATGTTCATTTACGAAAAGTTTC
CACCAAAAGTAACGTGTACGATACCTAAGAAAGAAGATGTTGTTGGTAAA
GAAATGACAAGTTTAAAGAAATTGTTTCAAAAGGCTGTCATTTATTACCA
CCCTGACAAACAAGATGTCGAAAGGTTTGGAATGAAGTGGAAAGTTTTAA
GTGAAGAAATTACAAAAGATTTGTCAACCTTTTACGAAATCACCAAAGGT
CTTCCACAACCGACAGAAACTGAAGAAACTGAAGAGTGA Coding sequence (CDS) from alignment at sc0000113_pilon:309819..314107- >XLOC_041603 ID=XLOC_041603|Name=XLOC_041603|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3012bp|location=Sequence derived from alignment at sc0000113_pilon:309819..314107- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTTCCACCGCGTGGTGGACATCCTTTTCAATCTTCTCAAAGTTTCG
GAAGGACGTTTCGCTGTCTCAAGTTAAATTTTATACCTTTTCTGTCAATA
TCATGGCACATTGCTGCTGCTGCTCAGTTGATTCTTTGGTGAAAACTCTG
TCAAGTAGCTGGAGATCTGAGGGCAACAAGTACTTTTCACAGGCTCATCA
AGATGGTCTTGCACCAATCATAAAGGAAAGTAGATTACAAGAAGCCATCA
AATTTTATCACAGAGCACTTTCAGCAGCTTGTGAAAACAAAGATGATGCA
GCCTCAGCTTGCAAAAACTTGGCAAAATCTAATTTTGGCTTGATATGCCT
TACTGATGACACAGAGGCTGAAATTAAACTTTTCAAAGAGTGTTTTCAAT
TTTGCAGCAAATCCCTTGAATATGGGCGTGATTGTAAATCACTTGATTGG
CTAATGGATGTAGATGCCCTTTACCGGACAGTATACTTCCTCATCTGTGA
CCAATTTGATGTATTGAGCACAGAACTAAAGATAAATCTTTTTGAATCTT
TGGCATCTGTAGTTTCTGAAAAGGATCGACTCTATCCTGATATAAACCAT
CATTTGGCAGAAGCTTGGCTTAGTGAAGCATGTATGGCTTTAAATGATAA
TGATTTTAAAACAAGTCTTAATGCATTAAAAGAAATGTATAGACCTGTGG
AAGAAGTCAAACGTTACGGAAAACATAGAGATCAATTGATGACAGATATT
GAATGTTTTGAATGTGACATTACAATTCAAATGGCACGCACTGAATCAAT
GCAAGCAATTTCAACAGAAAATTTCCACCGCGTGGTGGACATCCTTTTCA
ATCTTCTCAAAGTTTCGGAAGGACGTTTCGCTGTCTCAAGTTAAATTTTA
TACCTTTTCTGTCAATATCATGGCACATTGCTGCTGCTGCTCAGTTGATT
CTTTGGTGAAAACTCTGTCAAGTAGCTGGAGATCTGAGGGCAACAAGTAC
TTTTCACAGGCTCATCAAGATGGTCTTGCACCAATCATAAAGGAAAGTAG
ATTACAAGAAGCCATCAAATTTTATCACAGAGCACTTTCAGCAGCTTGTG
AAAACAAAGATGATGCAGCCTCAGCTTGCAAAAACTTGGCAAAATCTAAT
TTTGGCTTGATATGCCTTACTGATGACACAGAGGCTGAAATTAAACTTTT
CAAAGAGTGTTTTCAATTTTGCAGCAAATCCCTTGAATATGGGCGTGATT
GTAAATCACTTGATTGGCTAATGGATGTAGATGCCCTTTACCGGACAGTA
TACTTCCTCATCTGTGACCAATTTGATGTATTGAGCACAGAACTAAAGAT
AAATCTTTTTGAATCTTTGGCATCTGTAGTTTCTGAAAAGGATCGACTCT
ATCCTGATATAAACCATCATTTGGCAGAAGCTTGGCTTAGTGAAGCATGT
ATGGCTTTAAATGATAATGATTTTAAAACAAGTCTTAATGCATTAAAAGA
AATGTATAGACCTGTGGAAGAAGTCAAACGTTACGGAAAACATAGAGATC
AATTGATGACAGATATTGAATGTTTTGAATGTGACATTACAATTCAAATG
GCACGCACTGAATCAATGCAAGCAATTTCAACAGGTGATACATTGTTGGA
GAATCACTTGCTTGAAGATGCTGATTTGAATATGGATTTGATTTACACAG
TCATCGATTATTACAGACATGCTATGGTCCTCACTCGAGGTGTTGAGGTG
ATACATTGTTGGAGAATCACTTGCTTGAAGATGCTGATTTGAATATGGAT
TTGATTTACACAGTCATCGATTATTACAGACATGCTATGGTCCTCACTCG
AGGTGTTGAGATTGAATTGGAAGCTATGGCACTCAGCAAATTGGGAAAAC
TTTACGATCAGGTTTTGAAGATCAAGCATCGTGCTTCTGATTGCTTCCAT
AAATGTTTGCAACTTGCAGCTACACTCGTCCCAAGAGTACTAACGTCTGA
AGATTGAATTGGAAGCTATGGCACTCAGCAAATTGGGAAAACTTTACGAT
CAGGTTTTGAAGATCAAGCATCGTGCTTCTGATTGCTTCCATAAATGTTT
GCAACTTGCAGCTACACTCGTCCCAAGAGTACTAACGTCTGAAGCTTGGT
ACAAAGTTGCAAATGAAACCCTTATGAAGTATCAAATGGAAAGCTACTCC
CACCAAGAACGAGAAAGACAAAAGGAACGTCAAAAATATCTCGATCTTGG
TACAAAGTTGCAAATGAAACCCTTATGAAGTATCAAATGGAAAGCTACTC
CCACCAAGAACGAGAAAGACAAAAGGAACGTCAAAAATATCTCGATGAGC
TGAAGACTGAGCTGAAGGAGATTTCTGAAGCAAAGAAGAAATGGAAAGAG
CAAGGTGGAGAATTCCTTATGTTCATTTACGAAAAGTTTCCACCAAAAGT
AACGTGTACGATACCTAAGAAAGAAGATGTTGTTGGTAAAGAAATGACAA
GTTTAAAGAAATTGTTTCAAAAGGCTGTCATTTATTACCACCCTGACAAA
CAAGATGTCGAAAGGTTTGGAATGAAGTGGAAAGTTTTAAGTGAAGAAAT
TACAAAAGATTTGTCAACCTTTTACGAAATCACCAAAGGTCTTCCACAAC
CGACAGAAACTGAAGAAACTGAAGAGTGAGAGCTGAAGACTGAGCTGAAG
GAGATTTCTGAAGCAAAGAAGAAATGGAAAGAGCAAGGTGGAGAATTCCT
TATGTTCATTTACGAAAAGTTTCCACCAAAAGTAACGTGTACGATACCTA
AGAAAGAAGATGTTGTTGGTAAAGAAATGACAAGTTTAAAGAAATTGTTT
CAAAAGGCTGTCATTTATTACCACCCTGACAAACAAGATGTCGAAAGGTT
TGGAATGAAGTGGAAAGTTTTAAGTGAAGAAATTACAAAAGATTTGTCAA
CCTTTTACGAAATCACCAAAGGTCTTCCACAACCGACAGAAACTGAAGAA
ACTGAAGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000113_pilon | genome | sc0000113_pilon:309819..314107 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1174-1506:334 |
| Aaloc | 1075-1173:616 |
| Aaloc | 931-1071:1140 |
| Aaloc | 820-930:1736 |
| Aaloc | 1-816:4290 |
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