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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000653_pilon:16523..19231- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041580 ID=XLOC_041580|Name=XLOC_041580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2709bp|location=Sequence derived from alignment at sc0000653_pilon:16523..19231- (Clytia hemisphaerica_ch_hm2_pilon)
TTTACAGGGATGACATCTGAGGAGTCTGCAGCATTGACATCAGCCATGAA
GAAATCAGGAGATGTTTTGGACTGGCCAGCTGAATGGAAATATCAAGTAG
TTGATAAACACTCAACAGGTGGAGTGGGTGATAAAATCAGTTTGATTCTA
GCTCCTGCTGTAGCCTCTTGTGGACTAAAGGTATGGAAAACGATCTTGAT
TTATATGTTGAATTGAAATTACTCCTTTCACTATTACGGAAATGAAGATT
GACTTCAACCGCTTTGGACTTTATTGCAGGACACAAAAAAAGATACAAAA
TCAAAATTCTCAAATCCAGAATCGTTGAAGAAGATTCGACCTAATTTTTA
CATGCCTCATTTAATAGATATACTTCCTCAACATTACACAGTACACTTTT
TATGTTTTGTATAATGAATTTAGTGTGATAATGTTATCGAGGTGATTAAA
CGAATATTAAAGTGTACTTGCCAATGCTACGCAGCGATACAACTGAGTGG
TGTTAAGCACCAAAGCCACACCAACCACCCAACTACGTTAAACATCAGTT
AACCTTATCAAATAGAAAAAGAAACTGGAAAAAAAAATACCTAAGAAAAT
TTATCATTTATTTAGCTACCAATGATATCTGGTCGATCTTTGGGATTCAC
TGGAGGAACATTGGACAAATTAGAATCCATCCCAGGATTCAATATCAAAT
TCTCACCAGAAGACATCACCAAGGCTTTGGAGACTGCTGGTTGTTGCATC
GTTGGGCAGACGGCAACATTGGTACCTGCAGACAAGATTTTATATTCCAT
TCGTGATATCACATCAACTGTTGGCTCATTCCCTTTGATCGCAAGTTCCA
TCGTCTCCAAGAAAGCTGCTGGTATAACAAAAATATACGTTTACTCTCTT
TGAATTTGAAGCGATAACATCTTTACACCCATAAGTTAAGTGAATTTAAA
GTACATAGAAATGGGATGAGAGGAACAAGGATGTCAGTCTTAAGGCTTCG
CCCTTGATCCCAGGACTAACATAATCGACGTTATATCAGGATGTTACTTG
ACGAGTTTTGTAGTCAGCTATCATAATTTATAGCTAGCAGACCAGAAGAG
GCGGTAGTGTGACAGTGATTATCATAAACGAATTCAAGGAAGAATTAGAC
TTCTGTGCTCTTTATCTTTAAAAAGCAACTTTAGCAATGGAAAAAATGGC
CTTTTCCCACATGCCATCAACGAACTTAATATAGAAATCAAATGCAAAAT
GTGGATTATTGACTGAAAAATCATACACCAGTGTCTGATCTGAGGGGAAT
TCAAGATTTATGAAGGAGAGTGTCTCTTTTATCCATACTCCTTATAAGGA
AATGAATACTCTCCTCCAAAGAATAAATTTTGAACCCCCTCAGATCCACC
AGCTTCATATGTTAAATTGTCTTTTTTTAACTTTTAGAGGGTATCTCAGC
GTTGGTGTTGGACGTTAAATACGGAAGTGGAAGCTACCAAAAAACCCTAT
TTCAAGCTGAAGAATTAGCTTCTCTTATGGTAGACATTAGTTGCCAACTT
GGTATCAAAACATCTGCTGTTATCACTCACATGGATCATCCTATTGGAAA
GATGGTAGGCAATGCTGTGGAAGTCATTGAATCTATTGAATGTTTACAAG
GGAAAGGACCGAATGATCTGATGGAATTGGTCACCACTCAAGGTATTAAT
ATAACTGAATATCTATATTAGCCCCTCCCCCCAGCGGTTACCCAGAATGC
GCGAATGGGCTATTTCAGTTACGTGAATGCGTGAAAATTGAAAAACTTTG
CTTGAACGGAAATTGCGTGTATTGCAGAAAAAACATTGCGTGAATGCGTG
AATTTGGAGAAAAAAAATTGCGTGATTGCGTGAATTTTGAAGGACGTCTG
GGTGGCCCCTATATCAAATGCTTAGCAGGATTTTAGAACTTGCAATTACA
ATATCAACAAATTACTCATTTCTAAAAGTTAAAGTTTGAAAGGAAATCGC
CACAAACCGAATTTGTTTGTCATGTTTGGCCACGCTGTCATAAATATTTG
TGGTATGTGTGTTATAAGGCTATTGGGTATCATGTAGCAAATTTATAGAG
CTACTTCTATAGAGAACAAAGGCTTTTTTAATTGAAACAACAATGGTGCA
ATGATTTGTTTTCTGTTCGTTTCCAGGTGGAGTTCTCTTATATCTGAAAG
GAATTTGCGAGAGCCCTGAAAAAGGAAAGGAGGAGATAGAACGACGAATT
AAGAATGGAGACGCGTTAAAAAAATTTGAAGAGATGGCCATCGTACAAGG
TGTTGATAAAACTGTTGCTGAGAATCTCTGTAAAGATCCTTATTCCGTTC
TCTCGTTATCATCAAACAATACTATTCTACATGCATCATCTTCAGGTTTC
ATTTCTGATATGAAGGCTATTTCGTTTGGAGAAGTATCTTCAAGATTAGG
TAATGGACGTCAAGTTCCAACCGATGACGTCACTTACGATACCGGTATAC
AGATTCTCCGACACGTCGGTGACGAAGTTAAGTCAGGCGACCCCATACTG
AAAGTATACCATAAAGAAAAGACACTAGATGCAGGTTTCAAGAGTAAACT
TGAACAAGCTGTCACTGTTTCGTCTACCAAACCAAAGCCTAGAAATCGTG
TCGAGAAGGTTATTCATCGTTCTTCTTCGTCAAGTCGTATTTTTATGGTG
TCACAATAG Coding sequence (CDS) from alignment at sc0000653_pilon:16523..19231- >XLOC_041580 ID=XLOC_041580|Name=XLOC_041580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000653_pilon:16523..19231- (Clytia hemisphaerica_ch_hm2_pilon)
TTTACAGGGATGACATCTGAGGAGTCTGCAGCATTGACATCAGCCATGAA
GAAATCAGGAGATGTTTTGGACTGGCCAGCTGAATGGAAATATCAAGTAG
TTGATAAACACTCAACAGGTGGAGTGGGTGATAAAATCAGTTTGATTCTA
GCTCCTGCTGTAGCCTCTTGTGGACTAAAGTTTACAGGGATGACATCTGA
GGAGTCTGCAGCATTGACATCAGCCATGAAGAAATCAGGAGATGTTTTGG
ACTGGCCAGCTGAATGGAAATATCAAGTAGTTGATAAACACTCAACAGGT
GGAGTGGGTGATAAAATCAGTTTGATTCTAGCTCCTGCTGTAGCCTCTTG
TGGACTAAAGCTACCAATGATATCTGGTCGATCTTTGGGATTCACTGGAG
GAACATTGGACAAATTAGAATCCATCCCAGGATTCAATATCAAATTCTCA
CCAGAAGACATCACCAAGGCTTTGGAGACTGCTGGTTGTTGCATCGTTGG
GCAGACGGCAACATTGGTACCTGCAGACAAGATTTTATATTCCATTCGTG
ATATCACATCAACTGTTGGCTCATTCCCTTTGATCGCAAGTTCCATCGTC
TCCAAGAAAGCTGCTGCTACCAATGATATCTGGTCGATCTTTGGGATTCA
CTGGAGGAACATTGGACAAATTAGAATCCATCCCAGGATTCAATATCAAA
TTCTCACCAGAAGACATCACCAAGGCTTTGGAGACTGCTGGTTGTTGCAT
CGTTGGGCAGACGGCAACATTGGTACCTGCAGACAAGATTTTATATTCCA
TTCGTGATATCACATCAACTGTTGGCTCATTCCCTTTGATCGCAAGTTCC
ATCGTCTCCAAGAAAGCTGCTGAGGGTATCTCAGCGTTGGTGTTGGACGT
TAAATACGGAAGTGGAAGCTACCAAAAAACCCTATTTCAAGCTGAAGAAT
TAGCTTCTCTTATGGTAGACATTAGTTGCCAACTTGGTATCAAAACATCT
GCTGTTATCACTCACATGGATCATCCTATTGGAAAGATGGTAGGCAATGC
TGTGGAAGTCATTGAATCTATTGAATGTTTACAAGGGAAAGGACCGAATG
ATCTGATGGAATTGGTCACCACTCAAGAGGGTATCTCAGCGTTGGTGTTG
GACGTTAAATACGGAAGTGGAAGCTACCAAAAAACCCTATTTCAAGCTGA
AGAATTAGCTTCTCTTATGGTAGACATTAGTTGCCAACTTGGTATCAAAA
CATCTGCTGTTATCACTCACATGGATCATCCTATTGGAAAGATGGTAGGC
AATGCTGTGGAAGTCATTGAATCTATTGAATGTTTACAAGGGAAAGGACC
GAATGATCTGATGGAATTGGTCACCACTCAAGGTGGAGTTCTCTTATATC
TGAAAGGAATTTGCGAGAGCCCTGAAAAAGGAAAGGAGGAGATAGAACGA
CGAATTAAGAATGGAGACGCGTTAAAAAAATTTGAAGAGATGGCCATCGT
ACAAGGTGTTGATAAAACTGTTGCTGAGAATCTCTGTAAAGATCCTTATT
CCGTTCTCTCGTTATCATCAAACAATACTATTCTACATGCATCATCTTCA
GGTTTCATTTCTGATATGAAGGCTATTTCGTTTGGAGAAGTATCTTCAAG
ATTAGGTAATGGACGTCAAGTTCCAACCGATGACGTCACTTACGATACCG
GTATACAGATTCTCCGACACGTCGGTGACGAAGTTAAGTCAGGCGACCCC
ATACTGAAAGTATACCATAAAGAAAAGACACTAGATGCAGGTTTCAAGAG
TAAACTTGAACAAGCTGTCACTGTTTCGTCTACCAAACCAAAGCCTAGAA
ATCGTGTCGAGAAGGTTATTCATCGTTCTTCTTCGTCAAGTCGTATTTTT
ATGGTGTCACAATAGGTGGAGTTCTCTTATATCTGAAAGGAATTTGCGAG
AGCCCTGAAAAAGGAAAGGAGGAGATAGAACGACGAATTAAGAATGGAGA
CGCGTTAAAAAAATTTGAAGAGATGGCCATCGTACAAGGTGTTGATAAAA
CTGTTGCTGAGAATCTCTGTAAAGATCCTTATTCCGTTCTCTCGTTATCA
TCAAACAATACTATTCTACATGCATCATCTTCAGGTTTCATTTCTGATAT
GAAGGCTATTTCGTTTGGAGAAGTATCTTCAAGATTAGGTAATGGACGTC
AAGTTCCAACCGATGACGTCACTTACGATACCGGTATACAGATTCTCCGA
CACGTCGGTGACGAAGTTAAGTCAGGCGACCCCATACTGAAAGTATACCA
TAAAGAAAAGACACTAGATGCAGGTTTCAAGAGTAAACTTGAACAAGCTG
TCACTGTTTCGTCTACCAAACCAAAGCCTAGAAATCGTGTCGAGAAGGTT
ATTCATCGTTCTTCTTCGTCAAGTCGTATTTTTATGGTGTCACAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000653_pilon | genome | sc0000653_pilon:16523..19231 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 694-1224:532 |
| Aaloc | 439-690:1271 |
| Aaloc | 181-435:2095 |
| Aaloc | 1-180:2710 |
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