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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000437_pilon:98265..101944+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041574 ID=XLOC_041574|Name=XLOC_041574|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3680bp|location=Sequence derived from alignment at sc0000437_pilon:98265..101944+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTACAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGTAGATAC
ATCAAAAAACACTGACAAGGTATCGATTTATATGAATAAGCCTAAGTTAC
ATCCTTTATGGCCTTTTCGTAAAAGTAACATGAGTTTACTCCCGTTACAG
ttatagttatgaattttatgGATTTGCTCTGCTTAGAATCTTCGATGTAT
AATTTGCCACTCGATGCTAGGGATTAACAATTTTGACTTAGTTCATGCAA
AGTTTGACCTCTCCTGTAAATCTGATATCAGCTTAAAGCCAAGTCTCCAA
GGCACTTAAACACGCTTTGCAGGGATCCATTCATTAATGAGTCAAGTAGT
CTAACAAGAATAAAAGCTTTCCTACACCTAATGCAAATTCTTGTATAAAC
ACAAAGCATGTTCCTTTTAAGAAATGTTACGTATACATATACCACTTATg
atttatatctttttttgacaaaaatgatttttcagcGCATGAGATTTAAT
TGCCAAATTTTGTTAGTATGACTTGGGTTAACTGCGATTCCTGTTAATGG
GGAACTTTTGgtaatttgttgattttcttgtaCTGACTCTTTCAACTTAT
CAAATATCCATGTCAGGCAATACCCGTTAAAAAGaacatgcttataaaaa
cattgtTACTTTTGTTAATTGTTTAACCGCACTAATGAGTTGACAAATGG
TTTGTTTGAGTGATCGTGATAAGACTTTAGGAGACTATGCTAATCCTCTC
ATCGTTTGTGACAATTTTTCCCTTTTCTTTCTTCGTGCTGTATGTTAGCC
ATTTAAAATAAGCCCTCATCCCTCCCTACCAAGAAAGGTTTTATCAGGTC
CACTAAGAAAGCCTATTGCCAATATGCTGACACATTTCTTATGCATTCTG
TTCCCTCTGTAGGTTCCTTCACCCTCTTCATCAATCAAATCACCACGGAT
GAGATATGGCTGCTACTCTGAAAACCTCAGCAAGGTAGAGTTCTTATTTT
CTCTTTGCATATTTTTCACTCAGAACTATCTTGATATAATTGTAATGCAT
ATTGGATATCTCATCCTTAGAAAGGAAATGTTTATCTTAAAATGTTATCA
GTCAAGAATagagacaaatttattttccgatactcggagtttcgtgccgt
ttcaggcagtcttcagtGTCTTCAGTCAGATGGTATAGAGCACTGTCTTG
AATCGCAAGTCAGATTTGcaaatatcttaaaatgttACGTGACTCCTTAA
GCcacatctttcttctttttttttctaaacttgtaTCCAGCTCCTTTAGT
TGACGCAGATTgataaaatcaaattaataactgaTGAatactagactgga
gtcgtttataatgtgtgtagtagtagtagtataggcgttatatgataata
cgattattgttacgggatttagtttgtataaacgactggaagaatcggGT
GTTCCGGCCTTTTAGaatccccggctagctacgcagaaacttgcgtagcg
agaaaacaatatatcaagcaacaacaaactctcaaaCAAAATCAACTAAA
ATGAAACATTTTTAACACACGAATCCACACACATTTTCTTTTTCAAGAAT
TTTTTTTGAGCGGGAGAAAATTAtaattgcaatattgacacttttctttt
gtttggagttagtgcacaaaggtttctagacgactaaaattgtccCCTCC
ATTaccttttgctttatttctactatgttcGAATtggtcgtctagcttgc
tagactagatGAATACAGAAGCCACTCATTGCTTGAAGCATATTATATAG
AGGCAACAAAACAAGCAGTAAAATTCATAGCCAGTTAATCATAATATCTT
CGCGACCTCAAATCAGTGAATCACAAATAAAAACTAAAGTTTCATGATGA
GTTATTACCACACTCCATCCTTAGATTTTCAACAATAACTTGATAAAGTA
TAAACTTTCTTGTATTTTCTattcagggctcgaaataacggtcggacatc
ggacattgtccgacccaaaaatcacaattttcaagctaaagcaaccctga
tcggacattttgtccgacccacttgaaatcgttatttcgagccttatATG
CTTGATACAGTAAGTCAACCAGAATCAGACATTTCATTTATATCTTTCAG
CTTATTTTATTGCATGATCACGGTATCGGAAGCCCTTGTCTTTACTGCCA
ACATTGTAGTGGATTGGAATTACATTTCTGGAGGTATGATATCAATCTTT
CTTTTATCTTTGATAATGAAAATCTCTCAGAGCTCTTTTATTGAACACCT
GTCTCTATTTTCCAGACATGTAGGGATAAATAAAGGTTCGGTTAAATGCC
AATGATGACTTTCTCAAGGACAAGGGCTTTTATGAGGACGAGAATTCTCC
AATGATAGTGATGACACTCAGTGTAATTTTctagtgttttttttcttttc
acttgggACGATTTTGCAGTTGGTAGGGGTCTTACGGAATTGCCTTTTCa
tttacacgttgtttttttattagaacacctaaaatttggctgagcctgga
tgtgcttattttttagcaatttccAGCCTACAAtattcttaaatgcgttc
ttaatttttcagactactctaaatcgacaatatcatgcaaaaataaagag
cacttaaaattggtaaaatctgGAGAATATTTGATtcttgattttagaaa
atccatctctaagttcggttaaaactgcttgaaaagaggaaaaaattgtt
gtttcttgtcattttttttccaaactgaggctgggcgtgttcttacgatg
ttcttaatttttcgacgaatttcagcctgattgttcttatagactgggtt
ctaataaagaaCAGTGTAGCAGCACTGACTCAGACTTTGAAGATAAGAAA
ATCAGTATGAATCCTACGAGCTGTCTTATCTTTTAGCACAAAACCTTTCT
TCTTATCGACTTCCCTGTCGTGCTGTAATTAAgtcaattttattaaatta
ttttaattggTCTTTTACGGGATCAGTCATAACGGCATCTTTACcttatc
aaaataaacaaattgatTATCTTTTGAAATCTTATTTGAACCTATTTACA
TAACAAATgttaatttattaatttatcttttatattctttaaaactttaa
gcACCGAAAAAAGTGTGGCCTTACTCGCTAGGCAAATTATATTGAACACT
TAATTGATCGAGTGAGGCCATTCTCGACAGCGTGCTTTGTAAAAGGACCT
TAATAGGAAAAACATGAGAAACTCGTATTAAGGAATCATTCCTAATTTGG
TGTGTGTGTCTATccttttaattttgatgaacaGAAAAACATGCAAGAAT
TGTGGATGTCGAGCAGAAGATCATGAAGTACAAATCAATGAAAGTATCCA
TGATTCGTTAGTCGATTCTCTCCTACACATGAATGAGGACGACCTTTCAG
CTTttatcgaaatcgaaagtgaaaatgaagatCTACAATCTCATCCAATA
TTGAAAGAGTTTGTTGGAAAGAGCAGTCAAGTTAAAGAACGAAAGACTTC
CCGCTTATTACCACCACCGGTTGCTAAGAAACCATCCGGAGAGAACCAAT
CTACTAGCAGTATGACGGAGCATAAAGAAACACCTGATGAACGACAAGAG
GCCACTGAGGATTGCCAGTACCGAGAGAAg Coding sequence (CDS) from alignment at sc0000437_pilon:98265..101944+ >XLOC_041574 ID=XLOC_041574|Name=XLOC_041574|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000437_pilon:98265..101944+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTTACAAAAGCAAGATTTCAAAATGGAGGAAGAAGTCGTAGATAC
ATCAAAAAACACTGACAAGATGGTTTTACAAAAGCAAGATTTCAAAATGG
AGGAAGAAGTCGTAGATACATCAAAAAACACTGACAAGGTTCCTTCACCC
TCTTCATCAATCAAATCACCACGGATGAGATATGGCTGCTACTCTGAAAA
CCTCAGCAAGGTTCCTTCACCCTCTTCATCAATCAAATCACCACGGATGA
GATATGGCTGCTACTCTGAAAACCTCAGCAAGCTTATTTTATTGCATGAT
CACGGTATCGGAAGCCCTTGTCTTTACTGCCAACATTGTAGTGGATTGGA
ATTACATTTCTGGAGCTTATTTTATTGCATGATCACGGTATCGGAAGCCC
TTGTCTTTACTGCCAACATTGTAGTGGATTGGAATTACATTTCTGGAGAA
AAACATGCAAGAATTGTGGATGTCGAGCAGAAGATCATGAAGTACAAATC
AATGAAAGTATCCATGATTCGTTAGTCGATTCTCTCCTACACATGAATGA
GGACGACCTTTCAGCTTttatcgaaatcgaaagtgaaaatgaagatCTAC
AATCTCATCCAATATTGAAAGAGTTTGTTGGAAAGAGCAGTCAAGTTAAA
GAACGAAAGACTTCCCGCTTATTACCACCACCGGTTGCTAAGAAACCATC
CGGAGAGAACCAATCTACTAGCAGTATGACGGAGCATAAAGAAACACCTG
ATGAACGACAAGAGGCCACTGAGGATTGCCAGTACCGAGAGAAgAAAAAC
ATGCAAGAATTGTGGATGTCGAGCAGAAGATCATGAAGTACAAATCAATG
AAAGTATCCATGATTCGTTAGTCGATTCTCTCCTACACATGAATGAGGAC
GACCTTTCAGCTTttatcgaaatcgaaagtgaaaatgaagatCTACAATC
TCATCCAATATTGAAAGAGTTTGTTGGAAAGAGCAGTCAAGTTAAAGAAC
GAAAGACTTCCCGCTTATTACCACCACCGGTTGCTAAGAAACCATCCGGA
GAGAACCAATCTACTAGCAGTATGACGGAGCATAAAGAAACACCTGATGA
ACGACAAGAGGCCACTGAGGATTGCCAGTACCGAGAGAAg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000437_pilon | genome | sc0000437_pilon:98265..101944 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 226-570:3336 |
| Aaloc | 142-222:2151 |
| Aaloc | 70-141:913 |
| Aaloc | 1-69:1 |
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