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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000542_pilon:91983..97856+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041558 ID=XLOC_041558|Name=XLOC_041558|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5874bp|location=Sequence derived from alignment at sc0000542_pilon:91983..97856+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCAAAAAGCTGTCACTACAGGTGCTTCCATCGCTTGTGACCTTTGTA
ATCAATGGTTTCACCGCAAATGTTCATCAATGAGCGACCAAATTTACAAT
TGTCATGTTAACGAGGAGAGTTTGGAGTGGCTTTGTCCAGGTTGTGCACT
GGCAGATATTTCGAACAGTCTCTTTGACACCTCAATCTCTTCTTGCAGTT
CCGCTTCAAGTATTGAAAACAatcttctaaagaaaaaagtcagtaAGCTT
CGAATTGTTATCTGTAACTTTCAAAGTATttacaacaaaatgaaaatttc
aaattatgcATTACAAATATAGACATTTGATTGGGACTGAAACACATATC
TTGTAACATTCTTAACTCTGAGCTTATCCCAAAAACAGGCTATCAAATTG
TTCATCGGTGTGACCGTAATGATGGGTACGGAGGCGTTATCATCATTGCA
AAGGAATCTTTGATCACTGAACCCATAAAGGCTTCTAACAGTCATCAAAT
AATCGCTGTAAAAGTGGAGACATTCCAGAAGCCCATAATCATCTCATCTT
GCTATCGATCACCAAACAGCTCAATTCAGGAAAACAATGACCTTGTCCAA
TCAATAAACAACCTgtccaaaaaattcaaatcaaacccTCAGTTTATCGG
AGGAGATTTCAATCTACCAGATGTTGATTGGGAGTCATACACAATTACTG
GATCTCAATACCCTCAAGCACTGAATGAGCAATATCTTGAGGCATTTGAC
ATAAACAGTCTTTCCCAAGCTGTCAATTCTCCAACCAGACAAAAATCTAT
CTTAGACCTACTCATTACCAACAGACCGTCCTTCATCAAAAGCTGCAGAC
CAACACCAGGTTTTGGAGATCACCAGACAGCTGTTCTTGCTGACGTTTAT
TGCCACCCTAAAAGACAGCGACCTGTACAACGAAAAATCTACCTCTGGAA
CCGTGCTAACTTCGACCAGATGAAGCAAGATGTAAGACAAGCGTCAGACC
AATTCTTGGaaaaCGaaaCAACCGATACACCGATCAATAACTTGTGGTTA
AAATGCAAAAATATCATTACCACTGCTCAAGAAAGCAATGTACCGtgcaa
aaattcaactaaaCGATACAACCAACGGTGGTTTAACCAATCATGTAGAC
GTGCCGTTCGAAAAAAGCAAAGATTATATCATAGATACAAACGCACAAAG
CAATCAGCTGACTGGAACAAATACATAAAAGCTGCAAAGAAAGCAAGATT
GACTTGTAAACAAACTTGTGATAAATTTATCAAcgacaattttttatcag
aacacaAATCAAATCCGAAAAAAGTTCTACAGTTACATCAAATCTAAAAA
GCAGGATAATATCGGAATCACTTCTTTGCTCTCAAATGGAAATACTTTTA
CTGATGACACTCAAATTGCAAAAATCCTCAATAATCAATTTCTGAGTGTT
TTGTCAGAAGATGACGGCCGAACACCAGATATAAAAGAAATACCTGTCCA
CCCATCAGTGAATTAGAATAACATAAAATGTgttcaaaaattactttcag
agCTCAACCCCAGCAAAGCTAATGGACCAGATCAAATTTCCACCAGAATT
TTGAAGGAGTGTGCTGATATAATAAGTAAACCCCTTACTCTCATCTTTCA
AGCTTCGCTGAAGCAATCAAAAATTCCAGATGACTGGCGCAAAGCAACCA
TTACCTCCGCTATATAAAGGCAACAACAAAAGCAGATCAAACCCTGAAAG
CTACCGCCCTGTGAGCCTAACATCTGTACTATGTAAAACACTCGAACACA
TATTCACAGTCACCTAATCAACAATTTAGAGCAGCAAAACATCCTCACTG
ACCGACAACATGGATTTAGAAAGAAACGATCCTGTGAGACACAATTAGTA
AAAACTGTTAATGATCTAGTCAAGATATTGAATGAAAAAGGGCAAACTGT
GCTATACTTTTGGACTTCAGTAAACCCTCGACAAAGTTTGTCACCGCAAG
TTACTTTTAAAGCTAAGCTTCTATGGAATCAAAAACAATTTGTTGACTTG
GATAGAGGATTTTCTCAGTAACCGAACCCAAAAAGTACTCGTTAGAGGCG
TAGAATCACCAGAGGGAAAAGTAACATCCGGAATCCCACAAGGATCGGTA
CTGGGACCCCTGCTGTTTAGTAGTATAGTATTGTTTAGTATATATAAATG
ACATATCACTAGCAGTCACATCCTCAGAGATAAGTCTTTTTGCTGATGAC
GCTCTACTTTACAAAtccatcaaatcaatcaaagatGCCAGAGATCTGCA
AAATGACTTGAACCACCTTACCCAATGGGAAAAGGACTGGTCCATGGAGT
TTAATGCTGACAAATGTAAAGTCCTGCGATTTAcaaataaacacaaaaac
acTGAAGAAACATATTCAATCCATGGCTACAATCTCGAATTGGTAAAATC
AGCTAAATATCTAGGAGTGATCTTGGATAGCAAATTAACATTCAACAAAC
ATATCACAACAACGTCTGCAAAGGCTCATAACTGTCGACATTTTTTGCAA
CGAAATCTTTGAATGTGTGACAAGGAAGTTAAACTCCAATGCTACAAAAC
CTTTGTACGACCCATAATCGAATATGCATCAATAGTATGGGACCCAGTAG
GAAATCTAAAACTCAATCGACACATAGAGTCTGTACAACGAAAATCAGCT
AGATGGATTTCTAATCAATGGCAACGAGAAGCCTCTCCAACTAGTATGAT
TAAGAACCTTGACCTGCAAACATTGGAGCAGAGGCGTACAGTCAAGCGCT
TAACATCTCTCTACCAGTTTCACCTTGGAATCAAGTTCATGCCTCCTAAT
ACCATTAAACCTCAGAGATGCAATGATCTTCGATTTCAGCCAATCCAAGG
TGCAATTCAACGGTATAAGGAGGCATTACCTACTCCTTACCCATACACAA
TCAAAGAATGGAATATGCTTTCAGCTGGTCTGGTTAATGCTGAGTCGTTA
GATATATTTAATGATAAATTAGTGGCCTTCCTCAAATAGATTATTTTCTT
AATAAGTTTGCTTCAAATCTCAGTGTTAATTAATCTTGTCTTGTCTtatc
aagttttcaaaattctttcagtGATGCGTGAGGTCATATAACTTCTTTCT
GTAGTTTTTTCCTCAATTCAACTTGCaatcttaatttttcaatttatctt
aTGTTTTATATATTAGTTAATAAATGTTTTTACTCAGAATTgtttttatc
cttcacatatttttatcgttcacatttttagccttttagtttgttttCAA
TGTCAATACGGCCATGTAGCTCTTTTTGGTAACCAATTAAATTCCTCAGT
AATCTAAGTTCTTTTTTCTGCAATATTCAATTACCTCTTAATCCAAAGTG
Gttgcctttttattaaattctagattttattatatttagacagattttat
tttattaccattttattttacattcagGAAATTGTACGTATGTACCCTCT
GAATTATTGAATAAAAGTAGAAGAAGAAGTACCGAGCCTACCgatgcgtc
ggcagggtcctgtttTTTAGCTATATCTAACATACATCGTGTACATGAAA
TTTACACCCTTGAAACTCTTGAGATTCAGAAACCCGCTGGAAGGAATTGG
GCCAGTTCCAGAATACACCTTTCCAGTAATTAAAACTCCCCGGAAATAAT
AATGTTACTACTCCACccattgtgtataaaattgtttgcaGTTTGGGGCA
AGATAAACGAATCTGTCTTTGTCTGGGAGCtgaagggaaagtgggttttc
agcttttAACTTGTGATAGCGatctttttttttggcaaaaaatttgttca
ggGTTAGaaatagcctggagatccatgctatgatttcttattctatatac
tgatcgTACGCGCGTTTGGTTTAGCAACGCGAACGCAAACTAccgatgtc
taaacttttcaatatatctccagaactaacagactttttgaaattctgta
aaaaggttcaagttcctgaatagttttactatttTCTGTGAAAAgatcat
aaccatcagtgaaatactcgttcatctatttaagattgaagacaaaaatt
atcgaagaaaaataaaccttgagcacaaatgcttttttaaacactttttt
acaccgaaaaacaaataacctTccccccctcaaacattgaagaagcctct
actaattaaagtaaatgagataagataagataaaaccttaaaatcaacca
gaatttacaaccttttgtccaaagcaaaagacgtgcttttcccGTCGCCA
TCTTGTattagaatgagaattattttcggttccagttcacatggaaattt
tttcatccaatcagattgcgcaatttcacttttgctttctctagtccaat
aagactgcaggatttgagtcatgtgacatctctattgaaaaatagagaaa
aaacccgcacaaaataaaatagaaatacaggggggaCACACTagtggcta
caggaactgaaagcaaacaactaaggccaatatttttgggttttctgaag
gacaaaaggtataggaagctttactgaaggagggataaggctggaactat
ctatttaaaagatatggacaaaaaatggCACTAAatggcacttttttggg
tgataattaagattttacttagaaactttaattctcttacccccgtcctg
cccccccccctgatatgagcaaggaaATCATGTTGAAAATtactactgaa
aatttcagatcaaaacaaacaaaaaaagctggaaaaagctggtttttgac
tgtttctgatcctaaggtgcttatttttatcatttttccaggataaaaac
atttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTACgaaaaaaga
aggaagaaatccttgccaaaaagaaagcacaagaagaacagaaaaagCAG
GGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGggagtttttt
agaaaaattcaaatccatacaaaatcaaaccaaaactccagacattaaaa
aagaaccgcaaaGTACTGCTGCACCGATGGCATTTGCGAATGATGGAAGT
TTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAAGCAGGAGCC
TGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTAAAAAGACAT
CTAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCCCAAATAATG
TCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGGTATGTccag
atttttctttatttgttgttgtttcaGGCTAATATGTGAGATACaagatg
ttgtttttttttgctttgataaCGATTTTAGATAAATTCACTCTTACTCT
TCTAGATACAAAAGCTTTATCTTTGGTATTTCAatcacattttattttaa
ctttccttttactcttttgtgcttagcTGTTATGTGAAGCAGTTTTTGCA
ATCTTCAAATGAAAGTGAACAAGATTAtgagggggggggctaaatcCAAG
TAATTTTGCACTTTTGATGAAGGCTTTGAGGAAGAACTTTTAATGATGGG
TCcatattttgaatgttttcgaTTGCTTGTTCCGTCCTCAAATTGCATTT
TTGTTGAAACCCAATTAGGCACAAAAGAGTAATCATGCATTTCTTCCcat
tcttcttttttgtacTTGATGAAAAGGAGGTATAAGTTTTATTTAGCACC
CACCCAACCGCCCCAAGCCGATGATTACGAAGTAGCACGCGAGTTGGCGG
AGAAAGTTCACAACGAAGGAAAACAAGCTGAAATGATCGCGCGCATCCAA
GGAAGAACGAACCCAAAATACAAG Coding sequence (CDS) from alignment at sc0000542_pilon:91983..97856+ >XLOC_041558 ID=XLOC_041558|Name=XLOC_041558|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1200bp|location=Sequence derived from alignment at sc0000542_pilon:91983..97856+ (Clytia hemisphaerica_ch_hm2_pilon)
ATATCAAAAAGCTGTCACTACAGATATCAAAAAGCTGTCACTACAGgata
aaaacatttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTACgaaa
aaagaaggaagaaatccttgccaaaaagaaagcacaagaagaacagaaaa
agCAGGGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGggagt
tttttagaaaaattcaaatccatacaaaatcaaaccaaaactccagacat
taaaaaagaaccgcaaaGTACTGCTGCACCGATGGCATTTGCGAATGATG
GAAGTTTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAAGCAG
GAGCCTGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTAAAAA
GACATCTAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCCCAAA
TAATGTCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGgataa
aaacatttaaaatgtcTTCGCTGACGGATCAAACTGAATATCTACgaaaa
aagaaggaagaaatccttgccaaaaagaaagcacaagaagaacagaaaaa
gCAGGGAGTAAAACCTGAATCTACGGTTTCCTTTGCTAATGATGggagtt
ttttagaaaaattcaaatccatacaaaatcaaaccaaaactccagacatt
aaaaaagaaccgcaaaGTACTGCTGCACCGATGGCATTTGCGAATGATGG
AAGTTTCATGGAGCGTTTCAAAGCTATGCAGGAGAAGGGTATCAAGCAGG
AGCCTGACTACCAAAAGATGGAGAATGTGAAGCCGGCAATCAGTAAAAAG
ACATCTAGATTCGATCAACGACCTTCATCTACTTCAACATCCGCCCAAAT
AATGTCTTCAATCCAGAGGCCTGCCTCTGTCTTTGAAGATAACGCACCCA
CCCAACCGCCCCAAGCCGATGATTACGAAGTAGCACGCGAGTTGGCGGAG
AAAGTTCACAACGAAGGAAAACAAGCTGAAATGATCGCGCGCATCCAAGG
AAGAACGAACCCAAAATACAAGCACCCACCCAACCGCCCCAAGCCGATGA
TTACGAAGTAGCACGCGAGTTGGCGGAGAAAGTTCACAACGAAGGAAAAC
AAGCTGAAATGATCGCGCGCATCCAAGGAAGAACGAACCCAAAATACAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000542_pilon | genome | sc0000542_pilon:91983..97856 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 475-600:5749 |
| Aaloc | 25-471:4843 |
| Aaloc | 1-21:1 |
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