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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:2157595..2159679+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041475 ID=XLOC_041475|Name=XLOC_041475|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2085bp|location=Sequence derived from alignment at sc0000003_pilon:2157595..2159679+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTGAAAAGTTTCAGTATCTAAAAAGTTATTTAATCGATGAAGCCGCTGA
CGCTATAAAAGGACTTAGACTTTCTGCTgaaaattatgataaagcgaGAG
AGATGCTGGAGCAGAGATTTGGCGATACACAAGTTTTAATTTCGCATCAT
ATGTCGCAGCTTTTAGATATACCACCTTGTGCAAATGTAGAAAACTTAAA
AGAACTGCGAAAACTTCATGATTCAATCGAATTTGCTATTCGAAATCTTG
AAACTTTGGGCTTAGATCAAAAGGAATATGGTCCAATGCTATCACCTATT
TTGCTGAACAAGATTCCTGTAGAAATCAAACTGATCGTTTCGAGAACTTT
GGAAAAGAATCAAAAATGGGACATTTCCAAAATAATGAACACTTTTTTGA
CAGAACTAGAAGCGAGAGAGAAAGTCAGCACCTCATATACGGAGGAGGGT
GCATACGCGTGTTCTGGTGCATCCCTACATGTTAGTTCAAAGTTCGAAAA
CAAGCAGAGACGAGAATTTCATAGAAAGGAGGATAATCAAAAActgattt
gtattttttgtcgGAGAGGTCACAGATCTAGAGATTGTGATATTATAACG
AAACCGGAAATTCGTAAAACTATTTTACAAAAGGAGAACCGTTGCTTTAT
TTGTATGAAAATTGGACATCGtgctcaaaaatgttcaaataaaatgaaat
gttttaatTGTAAAGGCAGACACCACGTTGCTGTTTGCACATACAAAAGT
GATTCTTCTCAAAGTAATTCACCAAATGCAAACTCCTCCCATcaaaaaga
ggagaagaaagaagagaaagatcAACACCCTATTGTTCCAGTCACAACAA
GTAACTTTGTCGATGTAAATAAAGTGAATTCGGTTCTTTTGAAAACTGCT
CGAGCGGAAATCTTTACAATAGatgaaaaacattcaaaaaacgtTAGACT
TTTATTTGATGATGGTTCAATGTCCAGTTACGTAACTAAAGAATTGTGTA
AAGAACTTTGTTTaaaaccaattgcaaaacaaaaggttgcgatcaaaacc
tttggtcaaaacaaaacaatcaaagAGCTCGATGTTGTTGAATTGTGTAT
CAAGTCGAAAGATAATAGAGAAAGTTTATACATTGAAGCTTTCGTGAACG
ACATTTGTTTACCGATTGAAAATCAAGATATTTCTTTAGCAAAGGAACAG
TATGAACCTTTGAACTTCGTTGATCTCGCTGATAGTAATCCACGTAATTT
ACCCATGACAATAGACATTCTTATCGGTTCAGCGCACTATTGGAACTTTA
TTGGTAACAAACAGATCAGATGCCCTGATGGTCCTACTGCTTTGGAGTCA
AAACTCGGTTACGTTTTGAGTGGTCCAATCGCCTCGAATGATACATCGCC
GACAACCTCGAATTTATTCGTTACTACACATGCATTGAAAGTCGCTTCAG
AATTCGTTGACCCAAGACATGAGATTCGAGATCACCTACACCAAATCTAT
GATACCAATAATGAAATTCCATCTGACCCAGAcgttttaaaaacttttga
tgaaactACGAAATTTCGTGACGGTCGTTATGAAGTTCAACTACCTTTCA
AATCTGAATCAATCGATACGTTGGGAGACAACTACAACACTTGCAGAAAA
CGTTTGAGAAATCTAACCAAAActtttaagaacaatcctgatTTACTTCA
AGAATACGCGTCAATTCTTGAAAACCAAGAGTCGTTAGGTGTTATCGAAC
GTATCGAACCTAATGATTACAAAGTCGGAGAAACTCATTACTTACCACAC
CGTGCAGTTGTTCACGAACAGAGAGAGACTACCAAAGTTCGTGTCGTTTT
CGATGCCAGTTGTAAGAGTGGAAAGGATGCTCCATCATTAAACGACGTTT
TAGAATCTGGTCCTTCGCTGACACCATTGCTCCAAGACGTGCTTATGCGT
TTTCGTTCGTTCAATTATCTAGTCGTTGCTGACATTGAAAAAGCATTCCT
GAATATCGCACTTGCTAGAGAGCATCAAGACTACGTTCGGTTCCTGTGGT
TTCGAGATATTTCGAATATTaactttgaacatttt Coding sequence (CDS) from alignment at sc0000003_pilon:2157595..2159679+ >XLOC_041475 ID=XLOC_041475|Name=XLOC_041475|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4170bp|location=Sequence derived from alignment at sc0000003_pilon:2157595..2159679+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTGAAAAGTTTCAGTATCTAAAAAGTTATTTAATCGATGAAGCCGCTGA
CGCTATAAAAGGACTTAGACTTTCTGCTgaaaattatgataaagcgaGAG
AGATGCTGGAGCAGAGATTTGGCGATACACAAGTTTTAATTTCGCATCAT
ATGTCGCAGCTTTTAGATATACCACCTTGTGCAAATGTAGAAAACTTAAA
AGAACTGCGAAAACTTCATGATTCAATCGAATTTGCTATTCGAAATCTTG
AAACTTTGGGCTTAGATCAAAAGGAATATGGTCCAATGCTATCACCTATT
TTGCTGAACAAGATTCCTGTAGAAATCAAACTGATCGTTTCGAGAACTTT
GGAAAAGAATCAAAAATGGGACATTTCCAAAATAATGAACACTTTTTTGA
CAGAACTAGAAGCGAGAGAGAAAGTCAGCACCTCATATACGGAGGAGGGT
GCATACGCGTGTTCTGGTGCATCCCTACATGTTAGTTCAAAGTTCGAAAA
CAAGCAGAGACGAGAATTTCATAGAAAGGAGGATAATCAAAAActgattt
gtattttttgtcgGAGAGGTCACAGATCTAGAGATTGTGATATTATAACG
AAACCGGAAATTCGTAAAACTATTTTACAAAAGGAGAACCGTTGCTTTAT
TTGTATGAAAATTGGACATCGtgctcaaaaatgttcaaataaaatgaaat
gttttaatTGTAAAGGCAGACACCACGTTGCTGTTTGCACATACAAAAGT
GATTCTTCTCAAAGTAATTCACCAAATGCAAACTCCTCCCATcaaaaaga
ggagaagaaagaagagaaagatcAACACCCTATTGTTCCAGTCACAACAA
GTAACTTTGTCGATGTAAATAAAGTGAATTCGGTTCTTTTGAAAACTGCT
CGAGCGGAAATCTTTACAATAGatgaaaaacattcaaaaaacgtTAGACT
TTTATTTGATGATGGTTCAATGTCCAGTTACGTAACTAAAGAATTGTGTA
AAGAACTTTGTTTaaaaccaattgcaaaacaaaaggttgcgatcaaaacc
tttggtcaaaacaaaacaatcaaagAGCTCGATGTTGTTGAATTGTGTAT
CAAGTCGAAAGATAATAGAGAAAGTTTATACATTGAAGCTTTCGTGAACG
ACATTTGTTTACCGATTGAAAATCAAGATATTTCTTTAGCAAAGGAACAG
TATGAACCTTTGAACTTCGTTGATCTCGCTGATAGTAATCCACGTAATTT
ACCCATGACAATAGACATTCTTATCGGTTCAGCGCACTATTGGAACTTTA
TTGGTAACAAACAGATCAGATGCCCTGATGGTCCTACTGCTTTGGAGTCA
AAACTCGGTTACGTTTTGAGTGGTCCAATCGCCTCGAATGATACATCGCC
GACAACCTCGAATTTATTCGTTACTACACATGCATTGAAAGTCGCTTCAG
AATTCGTTGACCCAAGACATGAGATTCGAGATCACCTACACCAAATCTAT
GATACCAATAATGAAATTCCATCTGACCCAGAcgttttaaaaacttttga
tgaaactACGAAATTTCGTGACGGTCGTTATGAAGTTCAACTACCTTTCA
AATCTGAATCAATCGATACGTTGGGAGACAACTACAACACTTGCAGAAAA
CGTTTGAGAAATCTAACCAAAActtttaagaacaatcctgatTTACTTCA
AGAATACGCGTCAATTCTTGAAAACCAAGAGTCGTTAGGTGTTATCGAAC
GTATCGAACCTAATGATTACAAAGTCGGAGAAACTCATTACTTACCACAC
CGTGCAGTTGTTCACGAACAGAGAGAGACTACCAAAGTTCGTGTCGTTTT
CGATGCCAGTTGTAAGAGTGGAAAGGATGCTCCATCATTAAACGACGTTT
TAGAATCTGGTCCTTCGCTGACACCATTGCTCCAAGACGTGCTTATGCGT
TTTCGTTCGTTCAATTATCTAGTCGTTGCTGACATTGAAAAAGCATTCCT
GAATATCGCACTTGCTAGAGAGCATCAAGACTACGTTCGGTTCCTGTGGT
TTCGAGATATTTCGAATATTaactttgaacattttATTGAAAAGTTTCAG
TATCTAAAAAGTTATTTAATCGATGAAGCCGCTGACGCTATAAAAGGACT
TAGACTTTCTGCTgaaaattatgataaagcgaGAGAGATGCTGGAGCAGA
GATTTGGCGATACACAAGTTTTAATTTCGCATCATATGTCGCAGCTTTTA
GATATACCACCTTGTGCAAATGTAGAAAACTTAAAAGAACTGCGAAAACT
TCATGATTCAATCGAATTTGCTATTCGAAATCTTGAAACTTTGGGCTTAG
ATCAAAAGGAATATGGTCCAATGCTATCACCTATTTTGCTGAACAAGATT
CCTGTAGAAATCAAACTGATCGTTTCGAGAACTTTGGAAAAGAATCAAAA
ATGGGACATTTCCAAAATAATGAACACTTTTTTGACAGAACTAGAAGCGA
GAGAGAAAGTCAGCACCTCATATACGGAGGAGGGTGCATACGCGTGTTCT
GGTGCATCCCTACATGTTAGTTCAAAGTTCGAAAACAAGCAGAGACGAGA
ATTTCATAGAAAGGAGGATAATCAAAAActgatttgtattttttgtcgGA
GAGGTCACAGATCTAGAGATTGTGATATTATAACGAAACCGGAAATTCGT
AAAACTATTTTACAAAAGGAGAACCGTTGCTTTATTTGTATGAAAATTGG
ACATCGtgctcaaaaatgttcaaataaaatgaaatgttttaatTGTAAAG
GCAGACACCACGTTGCTGTTTGCACATACAAAAGTGATTCTTCTCAAAGT
AATTCACCAAATGCAAACTCCTCCCATcaaaaagaggagaagaaagaaga
gaaagatcAACACCCTATTGTTCCAGTCACAACAAGTAACTTTGTCGATG
TAAATAAAGTGAATTCGGTTCTTTTGAAAACTGCTCGAGCGGAAATCTTT
ACAATAGatgaaaaacattcaaaaaacgtTAGACTTTTATTTGATGATGG
TTCAATGTCCAGTTACGTAACTAAAGAATTGTGTAAAGAACTTTGTTTaa
aaccaattgcaaaacaaaaggttgcgatcaaaacctttggtcaaaacaaa
acaatcaaagAGCTCGATGTTGTTGAATTGTGTATCAAGTCGAAAGATAA
TAGAGAAAGTTTATACATTGAAGCTTTCGTGAACGACATTTGTTTACCGA
TTGAAAATCAAGATATTTCTTTAGCAAAGGAACAGTATGAACCTTTGAAC
TTCGTTGATCTCGCTGATAGTAATCCACGTAATTTACCCATGACAATAGA
CATTCTTATCGGTTCAGCGCACTATTGGAACTTTATTGGTAACAAACAGA
TCAGATGCCCTGATGGTCCTACTGCTTTGGAGTCAAAACTCGGTTACGTT
TTGAGTGGTCCAATCGCCTCGAATGATACATCGCCGACAACCTCGAATTT
ATTCGTTACTACACATGCATTGAAAGTCGCTTCAGAATTCGTTGACCCAA
GACATGAGATTCGAGATCACCTACACCAAATCTATGATACCAATAATGAA
ATTCCATCTGACCCAGAcgttttaaaaacttttgatgaaactACGAAATT
TCGTGACGGTCGTTATGAAGTTCAACTACCTTTCAAATCTGAATCAATCG
ATACGTTGGGAGACAACTACAACACTTGCAGAAAACGTTTGAGAAATCTA
ACCAAAActtttaagaacaatcctgatTTACTTCAAGAATACGCGTCAAT
TCTTGAAAACCAAGAGTCGTTAGGTGTTATCGAACGTATCGAACCTAATG
ATTACAAAGTCGGAGAAACTCATTACTTACCACACCGTGCAGTTGTTCAC
GAACAGAGAGAGACTACCAAAGTTCGTGTCGTTTTCGATGCCAGTTGTAA
GAGTGGAAAGGATGCTCCATCATTAAACGACGTTTTAGAATCTGGTCCTT
CGCTGACACCATTGCTCCAAGACGTGCTTATGCGTTTTCGTTCGTTCAAT
TATCTAGTCGTTGCTGACATTGAAAAAGCATTCCTGAATATCGCACTTGC
TAGAGAGCATCAAGACTACGTTCGGTTCCTGTGGTTTCGAGATATTTCGA
ATATTaactttgaacatttt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:2157595..2159679 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2085:1 |
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