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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1166822..1169541+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041463 ID=XLOC_041463|Name=XLOC_041463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2720bp|location=Sequence derived from alignment at sc0000090_pilon:1166822..1169541+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTGATGATGGAgtcattaaaatatttcttgtactATGCACTTATTCT
AATCTTCTACAACGAGAGTGTTTGCAGTCAACAACGACACATGTTTTCAC
CGAATATTCGTTACCAAGGCTCTCACGGCAACGCGTCATTCAACTATAGT
TATATCAATCTCAAATATCTGAAAGGATATAAATTGGATATTGCACCTTT
GGCAACATACAACGTCCATAACAAATCACAATGCGCCaaagaatgcctaa
aaactaaagGTGATTGCAAGAGTACAAATCTCCGAGAAATGAGCGCTGGA
TTTGAATGTGAAATCCTTGGGGAAGACATTTACACATCTGACTTTCGATT
GGTAGAAGACAGCTCCATAACACATTTTATTATAGCCGTAAGTTCTTTAA
CCTCTAACCACCCCCGCCCCCTTATTAAACACGATTAATTGTCCCCAATG
GGAGAAACATCCCGGAATTTCGTCTCCTTTGCCTACTTTGCAGGCCCGTT
Agaacaaccgttaaagtggggagactgaaggctcaaaatgagataaattt
TCTAGTAATTCTGAAATCTCATTTGATCAAAATCTCCCCAGTCTCCACAC
TTCCGCTGGGCCTGTTTTGATATCTTTGAAACGTGTCGTTTCCTTCTGTT
TCTTTAGAATAAGTGCTTACAGAATCCATGCAGACGAGGATCCAAATGTG
TTCCCATTTATCAGAACAATAGTTATTATTGTGCAAGtgagtacacgctt
tttttttataagaatggtgtaagggggggAGTTGagcttttacggtgtga
cggtataacttttttaggaaaatcattattagatttaacatttagtacat
acgtcttaagcctaaaatggcatttttgggaaaggagtgagccttacttg
ggggtaattgacaatttatagttgaaaatgctctaaaaatggcattctta
gcttgagtagaaAGTTCCAagatgatattcttagcattattcttgaattt
ttggccattttcatcatggacatttttataaagtgtattcttattaaaat
aaAGCGTGttacacgattttttataagaacatccaggaTTTTTGAAGCGG
TCGgattattttactttttgagttttaagcccaaaatgttcttagaatgt
tcttattttcacgtaGATTGGAGAGCTTTTGCATGAAtttttttAcgcat
ttatgacgttctaagattgaagaatttgtGTTACAAAAATTGAGTACGAG
GCAAGtaatgttcgtaacgtaatttatgaaaaggtctatttctctttttt
tagatTCGAGCTGTAGAATAATGAAGAAAATTGAGCCTCGTTTATCTACT
GGTTATTATGATGTGTTAATTGCTGGAAAATGGAGAAAAGTCTTTTGTGA
TATGGACGAAGACGGGGGTATGACATTTCTTATTCAAATCAAGCCTGGCG
GAAATAGAGAAGCTGGGGTGGGGTTAAAGCCTCCCCACTTTTTAGCATAA
TAGACTTTTTTCTCTAATTCCTGGCgaatttatctcattttgagccttta
gCCCCATctacttttacggttgttccacaATAATCTACTTCAATCATGTC
CCTTAAAACGACCCTTTGTCACATCACAGATCCAAAGGAAGTTTATTTTG
AGAtaccggcgtaaaaggggctaTTTCATCTGATTTCATACGATTTGCGT
ATCTGTTATGCTATATCTAAAGGGAAAAAATGCACAAATCTGCGCATATT
TCCTTTCAAGAAAGACATTGAAAAAATGCCAtcattcaccaaaattcaag
AGCTCTTGTCGTTGTCTTTGTAAAtcttatatctcaattcacaaaagagt
gctcaaCCATAAATAGTTGATTACTTCAGTGATGTAGAAAAATTTCATGT
actaaaaacacccccttctcacagacccggtaggattttttcagccagta
gggataaaaataacagattgaaactcgatggagattgatattaGCGGAAA
TATCTAActaaacgacgtttgatagcttgaacggtcaacttgattttctt
tatgatgaaacatatagatgaacccatagtctgcggccgggtcagaaaat
ttttctttctaaCCCGgtcggtttccggaaacactacatttgttTACTTT
CGCCTCATAACAAAGTAAACTCATTTAATCATCTTAGGTGGTTGGATGTT
GGTCGGAAATTACTCAGTCCCATCAACACAAGTTGGACCGGAAATCAATT
ACGGTGATCTAGATTCATTCGCAGAGCTTTCCACTGGAAACTTTCTTCTT
GATTCGAACATCTATCTTCCCGTCATCGATTCTTCATCACCAATCAATGA
ATTCAGATTCAACTGTTACAAACCGTCAACGAATAGAGTTGTGGATATCA
CTACAGATCCTAGCACTCATTGGGGAGCTTACATCAATCGTTATATCTTA
GGACGGGAAATGAGAACGTCTTGTCAACCACCATGCGGAATTCGAGCTTT
AACCAAcgataaaagtgaaatttcaacCAAAGTGAACCGTATTGGTCACA
GTACTATTGTGCAGCTCTTCTACGGACCAGCTGTTTTCGAACATGCGACG
AGGCACATCTATCTCCAAGACAGTTTGAACTACCATGATTGTGATGACAC
AACTATTCCTGGTAATATAGATCAAAACCCTTGGCATGAGGGGTATTGGA
AGTTTTTCGTGAGGTGTTAG Coding sequence (CDS) from alignment at sc0000090_pilon:1166822..1169541+ >XLOC_041463 ID=XLOC_041463|Name=XLOC_041463|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000090_pilon:1166822..1169541+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTGATGATGGAgtcattaaaatatttcttgtactATGCACTTATTCT
AATCTTCTACAACGAGAGTGTTTGCAGTCAACAACGACACATGTTTTCAC
CGAATATTCGTTACCAAGGCTCTCACGGCAACGCGTCATTCAACTATAGT
TATATCAATCTCAAATATCTGAAAGGATATAAATTGGATATTGCACCTTT
GGCAACATACAACGTCCATAACAAATCACAATGCGCCaaagaatgcctaa
aaactaaagGTGATTGCAAGAGTACAAATCTCCGAGAAATGAGCGCTGGA
TTTGAATGTGAAATCCTTGGGGAAGACATTTACACATCTGACTTTCGATT
GGTAGAAGACAGCTCCATAACACATTTTATTATAGCCGCTTTGATGATGG
AgtcattaaaatatttcttgtactATGCACTTATTCTAATCTTCTACAAC
GAGAGTGTTTGCAGTCAACAACGACACATGTTTTCACCGAATATTCGTTA
CCAAGGCTCTCACGGCAACGCGTCATTCAACTATAGTTATATCAATCTCA
AATATCTGAAAGGATATAAATTGGATATTGCACCTTTGGCAACATACAAC
GTCCATAACAAATCACAATGCGCCaaagaatgcctaaaaactaaagGTGA
TTGCAAGAGTACAAATCTCCGAGAAATGAGCGCTGGATTTGAATGTGAAA
TCCTTGGGGAAGACATTTACACATCTGACTTTCGATTGGTAGAAGACAGC
TCCATAACACATTTTATTATAGCCAATAAGTGCTTACAGAATCCATGCAG
ACGAGGATCCAAATGTGTTCCCATTTATCAGAACAATAGTTATTATTGTG
CAAAATAAGTGCTTACAGAATCCATGCAGACGAGGATCCAAATGTGTTCC
CATTTATCAGAACAATAGTTATTATTGTGCAAatTCGAGCTGTAGAATAA
TGAAGAAAATTGAGCCTCGTTTATCTACTGGTTATTATGATGTGTTAATT
GCTGGAAAATGGAGAAAAGTCTTTTGTGATATGGACGAAGACGGGGatTC
GAGCTGTAGAATAATGAAGAAAATTGAGCCTCGTTTATCTACTGGTTATT
ATGATGTGTTAATTGCTGGAAAATGGAGAAAAGTCTTTTGTGATATGGAC
GAAGACGGGGGTGGTTGGATGTTGGTCGGAAATTACTCAGTCCCATCAAC
ACAAGTTGGACCGGAAATCAATTACGGTGATCTAGATTCATTCGCAGAGC
TTTCCACTGGAAACTTTCTTCTTGATTCGAACATCTATCTTCCCGTCATC
GATTCTTCATCACCAATCAATGAATTCAGATTCAACTGTTACAAACCGTC
AACGAATAGAGTTGTGGATATCACTACAGATCCTAGCACTCATTGGGGAG
CTTACATCAATCGTTATATCTTAGGACGGGAAATGAGAACGTCTTGTCAA
CCACCATGCGGAATTCGAGCTTTAACCAAcgataaaagtgaaatttcaac
CAAAGTGAACCGTATTGGTCACAGTACTATTGTGCAGCTCTTCTACGGAC
CAGCTGTTTTCGAACATGCGACGAGGCACATCTATCTCCAAGACAGTTTG
AACTACCATGATTGTGATGACACAACTATTCCTGGTAATATAGATCAAAA
CCCTTGGCATGAGGGGTATTGGAAGTTTTTCGTGAGGTGTTAGGTGGTTG
GATGTTGGTCGGAAATTACTCAGTCCCATCAACACAAGTTGGACCGGAAA
TCAATTACGGTGATCTAGATTCATTCGCAGAGCTTTCCACTGGAAACTTT
CTTCTTGATTCGAACATCTATCTTCCCGTCATCGATTCTTCATCACCAAT
CAATGAATTCAGATTCAACTGTTACAAACCGTCAACGAATAGAGTTGTGG
ATATCACTACAGATCCTAGCACTCATTGGGGAGCTTACATCAATCGTTAT
ATCTTAGGACGGGAAATGAGAACGTCTTGTCAACCACCATGCGGAATTCG
AGCTTTAACCAAcgataaaagtgaaatttcaacCAAAGTGAACCGTATTG
GTCACAGTACTATTGTGCAGCTCTTCTACGGACCAGCTGTTTTCGAACAT
GCGACGAGGCACATCTATCTCCAAGACAGTTTGAACTACCATGATTGTGA
TGACACAACTATTCCTGGTAATATAGATCAAAACCCTTGGCATGAGGGGT
ATTGGAAGTTTTTCGTGAGGTGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1166822..1169541 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-1113:2190 |
| Aaloc | 469-579:1306 |
| Aaloc | 388-465:658 |
| Aaloc | 1-387:1 |
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