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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1235946..1239101+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041461 ID=XLOC_041461|Name=XLOC_041461|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3156bp|location=Sequence derived from alignment at sc0000090_pilon:1235946..1239101+ (Clytia hemisphaerica_ch_hm2_pilon)
caagcaagaaatAAACCAAAAATGAGGATTGGACTCCAACATTTGCCCCT
GGCGACTGTAATCCTTTCACCCTTCATAGTTTCATACAATGGATATGGTT
TATTCATGACAACATTCACAATGCTTTTATGctttttgatttactttgtC
ACCAATTATTACTTGACTTTGTGAGtattagtttttttcattttgtgttt
tttgagaTAAAAAGATTCAACAATggtataattttcatttttataatata
ataaaaatgataCAAATGTTGCATCTGTTTTATCTCAAAATTGTTCACTT
GCaacaatgttttgtttttggccAATTACTTTGTTGTTCTTTCTAGAAAA
CTTTCTTGAAGACTTTTCGAAGTTCTATTGTTCTATAacataaataaatc
tattgttttTCAAGCCAAGACCCTACCCTCATTTTGTTCATGTATTTAAG
TACAATAAATAAGTAAGAAAAGATCGAAGTGTGTAAAGATCGAATTTGAT
GTTTACCTCAAGTGGATTAATTTACGCAAGGATTATATTTTCGtaagttt
ttctaaaaatttgcgaaatttaatgctcgtgaaaattttgaaaccagGGT
TTTTGCCAATTACGCTAGTTATTTTGCTAAAATCCcgaggaaaatgaaag
aaatgagtTTAAAAAGGGGTCAATTCAAGAAAGTAAATCCCATTATTagt
tagattttttttgaaaaaaaatgtctcgCAAAAAATATCTgcttgtgaaa
atttaaaatccacTTGAAACGTATCTCATGGaagctaaaataaaatttgt
tctCTATGTTGcagatatttatttttctaatccAAAAAATGCATGAACTG
GGAATAATTTGACCATCTATCACTTTCAGTAAAAGAGTTGGAGCAAAGGA
AGATCGTATTGTTTTGAATACGTTTCCTATATCTCACTATGTGGAAAAAG
CAAGATGGTGTTTAGATAAATCAGGTACTTTTTATTATGTTTAagttatt
tgatgaaaattaagATCTTTCAATTTAAATCActgcttttcaaaaattct
tgcTTGTATATAATTCTTAACTGTTTCTTGAACTGTTTCAATTTATCTGT
TTATTGGACTGTTCTattaaaaatccatacagggggtggacaaacctttt
tcgaatccaaaacaaacttggaaatgtgtggatgCCCCCTCCTGGAATCT
AGATGGGAAAGTTTGCAATGAAACCCTTGGAAAAACACTCCTTATgaacc
cctggaaattcttcccAGATTAACCCTTGGAAGTATTCGTccacccctgt
atggatataaaatggaaaggTCCGAAGTGGTCCAAATAGAACTTGACATA
AAAAGTAtttcttcattcgtttttgTTTAAGTATTTTTCGATTGAAATAA
CCTGTTTTGGACATTATCCTTTAGGCATTCCTTATACTGAAGAAAAGGAC
ATTGGAGTCTTTTGGTTCATACTGACTGGACGAATGTTACCAACTCTTCG
AAATGAAACTCAAAGTCAGTATTTTGTTACTCTCTCGATTTTCttgttca
atttttatttaaggGACCTTTGatattagcgagattatgtatcgaaaata
ttctacggctacggtcgCGGGGCTGTCCATATGGGTCGccaccaaaggcg
acatgtcgttgtctactttgctctgtacggaaaaaaacactaaaactgta
taagcaaagtcgacataatgccgtacgtcaaatatgaAACTTGCGTTCAC
CCGCGATTAATttccttactcgccatttccctcgtcacattaaccgtagc
cgtagagaattcgaGATGGATAAACTCGCTATATTCTTCGCCAACACGTA
GTCCAAAAGTGTATAACAACATTCATTTTCTATTTGGAAATCCTGTTGGG
TTAATGTCTCTAAcaactacaatcaaggtcataatatttgagaaaaagtt
aTTCGCctggaagttttgaaaccacaatcgatttgtaagtgctctaaagt
aatttagaagggtagagttttaactctgagttttaacgctaggcTTAGAT
agaaccttaggatctgaggatccaaaagttcaaaaatagtctaacgaggc
tcagaatatatagtctggaagtctgccaacccatcCCATTAGATTCGTGA
ATAGATTCTTTTTCAACAACTTTCtttaattgtaaattttttgaatgaCT
ATTTAGTATTAGAAATTTGTGGCACAGGAAATTTAATATTATTACTTTTT
CGTTTGCAGCAAATGCTGGGTCGGTtgcgcccgtagaacaacaaatcaaa
ttggtctcacctaaattgttttttaaatattgatatCAGTATATTTTAGT
TTCCTGTTAAggtcgctacccactcagcattttatgttCGGCGAGCATGG
CGCACGGCTCGAGCGTTTTGGTCGCTAAACGCTTTTCTCATTCCACTGAT
CCAAAATAAAGGGGAGATATGCtgcaaatgttttcttttttcatttgttg
aaaTTCTTTTGCACACGGTACAAGAAAGTTAAATGTCTATCCTGGTTGGC
TAATTCAAAAAGAACGATATGGAGCTGCACAGCCTAGCgaaaaaggttga
aaagtttcaactcttgttgAGCTCAAAGCGAAACCTTTGAAGGCTTGgtt
tatgtaatttatgcaataattaagccgtgcgccttgttcgccgaccataa
aaaaccgagtttatgtatcggaggatatcgagggcaacggtaagtgaaat
cgatacaaaacaaagtcgatagtggACGTACGGCTTTATATCGcttttgc
tcacctaaacagacgacggaattttggtgtttttaccgtcgtcgagcaaa
gtggacgatGATTtaggagacatgtcaactttgctttatataGTCCCCCT
ctatttatctcgaatacataaactcgctaatgctgagtgggtagcgaccT
TTAaaggatttattttttatttttcagatatcACTATTCCCAACACGTCC
GATATTTGTAAATACTTGTACGGACACACGGTACAAACGCAAGGGGAAGA
AAAAGCAGAGTTTCTGAAACCTTCCACTAAAGGATTTGAATTAGAGAAGA
AGATTGATCGAATCGGTTTGTTGTTGAGAAGATATGCTTATTAtcatgta
agaata Coding sequence (CDS) from alignment at sc0000090_pilon:1235946..1239101+ >XLOC_041461 ID=XLOC_041461|Name=XLOC_041461|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1068bp|location=Sequence derived from alignment at sc0000090_pilon:1235946..1239101+ (Clytia hemisphaerica_ch_hm2_pilon)
caagcaagaaatAAACCAAAAATGAGGATTGGACTCCAACATTTGCCCCT
GGCGACTGTAATCCTTTCACCCTTCATAGTTTCATACAATGGATATGGTT
TATTCATGACAACATTCACAATGCTTTTATGctttttgatttactttgtC
ACCAATTATTACTTGACTTTcaagcaagaaatAAACCAAAAATGAGGATT
GGACTCCAACATTTGCCCCTGGCGACTGTAATCCTTTCACCCTTCATAGT
TTCATACAATGGATATGGTTTATTCATGACAACATTCACAATGCTTTTAT
GctttttgatttactttgtCACCAATTATTACTTGACTTTTAAAAGAGTT
GGAGCAAAGGAAGATCGTATTGTTTTGAATACGTTTCCTATATCTCACTA
TGTGGAAAAAGCAAGATGGTGTTTAGATAAATCAGTAAAAGAGTTGGAGC
AAAGGAAGATCGTATTGTTTTGAATACGTTTCCTATATCTCACTATGTGG
AAAAAGCAAGATGGTGTTTAGATAAATCAGGCATTCCTTATACTGAAGAA
AAGGACATTGGAGTCTTTTGGTTCATACTGACTGGACGAATGTTACCAAC
TCTTCGAAATGAAACTCAAAGCATTCCTTATACTGAAGAAAAGGACATTG
GAGTCTTTTGGTTCATACTGACTGGACGAATGTTACCAACTCTTCGAAAT
GAAACTCAAAatatcACTATTCCCAACACGTCCGATATTTGTAAATACTT
GTACGGACACACGGTACAAACGCAAGGGGAAGAAAAAGCAGAGTTTCTGA
AACCTTCCACTAAAGGATTTGAATTAGAGAAGAAGATTGATCGAATCGGT
TTGTTGTTGAGAAGATATGCTTATTAtcatgtaagaataatatcACTATT
CCCAACACGTCCGATATTTGTAAATACTTGTACGGACACACGGTACAAAC
GCAAGGGGAAGAAAAAGCAGAGTTTCTGAAACCTTCCACTAAAGGATTTG
AATTAGAGAAGAAGATTGATCGAATCGGTTTGTTGTTGAGAAGATATGCT
TATTAtcatgtaagaata
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1235946..1239101 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-534:2980 |
| Aaloc | 268-354:1427 |
| Aaloc | 172-264:881 |
| Aaloc | 1-168:1 |
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