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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1290662..1294320+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041458 ID=XLOC_041458|Name=XLOC_041458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3659bp|location=Sequence derived from alignment at sc0000090_pilon:1290662..1294320+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATCCTTCATCACCATGAGATTGTCATCGATTCTTTTGATCGTTTTGTT
TGCAATCAATTTCTATGATATTCATGCTGCCTCTGGAAATGTCATCAAAA
GTAAGAACGAAACCATAACCCTGTATAACTGAGTAAGGGAataaaaacac
ccctgtttcactaGCCTGACGAGaaaaaaaCAGTCTTGTCTCATTGACTT
GGTGATCGCCAAAAGAACACCCCTATCTTGCTGACTTGATGAAAGACAAA
AAATAGCCCCGTCTTATTGACTTGATGATAGACTAAAAAACACCTCTGTC
TCATAAACTTGATGAGAGAAAAGAACAGAGCTGTCTAATTGACGGGGATA
TAGAAtttaatttaagatttttttgtaTCGCTAATATAAGCCAAGCAAAA
GTGCTACTTGTATTGTGACCAAAGAAGTATACGCCCGAAgagctagaatc
gaatctttaacctttctcaagcaagaaaaagtgaagccttaaatatgcgc
cgtatttttgatgacggattgaaccTAGCAAtgcctttgttttcgagtga
tatatttttcgaaatttagctgtaaattttagtttcaatctgttatttgt
gtaaaaaccataTGAACCGTGCTAGGCCGCGcaattttggtaggatttgg
taggcttcaaatcctaccaaggagattcgattctagtccttcgggcttat
acttcattgatttTGACGCACCGGAACAAGGACCTCGGGAATTCAATTAA
TTTAATGtagaaatacacctttcccgtaattcaaacttctcagaaatttG
CCGGGAAAATATGCACTCCGCCGTtctgtataaaattgtttgggaggtaa
acgaacGGGTTTTTGCTtgtgaggggttagggaaagtagGTATTTAGCTT
CTAGCTTTTGATTGCGATCTCtgtttggcaaaatattttcagggtggtat
aataaatagaaagaatacacgtttttttttaggaAACTAGTtctaccaag
cagcctcaatgtttcttaagaaattggacTTTTGAGCCTTacatgtttct
tacatgtttctaaactttttgacataatcagcctcatggaaggctggatt
ggaaggttcttaaaaaaaacgaattaaaaaatgttatattctcattctca
gcctcagcatgtttcttagtttttaggcattctgagcctcatgtttctta
aaaatgtgtttcttaaaaaaacaaacgttaTACCAAGATCTGAGAGGGTT
CTGTTCAACagaacttaagggctctgaccatagtgaatttttaacatttg
ccatatacaaaatatgaatttctgcctgatgtagcggacaaaactttgac
atgttatacattttccgtgagtctgaaaattaaaaattgcaatgaaataa
tttgatgaagaagaagatgaagacttttgcgaagaagagcatttcaactt
tgaagagcttagtttcggcgaagaaaaaacattttgaaaatatttttgcg
gtAGATAGTGTATCCTTTGTCgaactaaaaatttttttcctgaaaatagt
gctttttgaccaattttccatcccaatttttcatagaaaaacaaccataa
cttttgatgcattaatttagaaaatttttccaaaaaattaaaacagttta
attctttgtggacagtttgaaaaaactttgaaacaaaaaggttaattacc
cattaaaacttagcactttttataaaagaaggtgatgcaacatattatta
atgtcttttttaaagttcctaacgtcatttttgcaattaagttcttaaat
actcttaagggatttgatcaaaaagcaatttataaaggcaattctttgtt
aaaagtgttaaagaatctaaaacataacttttatattcagatactaaaat
caattttccgactatgatggtcagagcccttaagaaaagctcaaaaaact
aACTTTCCCCAAGGAAACGCAGGCAATAAAAGTGTTGTTTACCTCAACCA
AaaaccaaacggtggagagcaacAAAACAACGCGCGCGCATCTGTTTTGC
AAATAACGAGAAAGATGTATACAGATAAATCACTTATGAACGTTATGAAC
CAATGAACCTAGACGTTCCCCGCGTATTTTTCTACGCAATCAAACAGCAT
AACATTCCCTGTTATTTGGTTGTTAGTGAGGTACTGGCTATTACCCAATA
AGAGTTTATTAAAAATATTCCATTTCATCCtatcttaaatttttttcaaa
tctgcTATTcatacaatcaaggtcataatatttgaggaaaaagggaaatt
caccgtgaagttttgaaaccacaatcggtTTGCGaatgctctaaagtagg
ttggaagggtagatttttatttctgagttttaacgctagacttaagactt
ctaaagtccaaaaatagtccaataaggatcagaatatagcctggaagtct
gccaacgcctcccaaattgaaatattcgattaaattaaagagataaccca
aaatcgactttctctccggaactttaaatcttgaaaaacgttaaaataac
cgaaattttcaatatatttcaaccatgattgtagaatgCCGTGATGTGAT
GGGCGCAGGGTATTGTGGGATACCAGGGATGTGTGGCGTTTACAAGGGCG
CTTGTGCAAAGACTTGTGGCGGATGTGGTGGGCGGAAGAGGATTGTTGGT
GAAAATGAAGAGGGGGATATGAACGACCAAAATTACAATAGTAAGTGAAA
TTATCAAGCAAATGAAAGCATACCCCGCTggaacacaacgttgttttaac
gtttgtctaacgttcacagcgtccatataaccttagatgaacgttgaaac
aacgttgtcgTGTGCCAGTTGGGTATCTTGCATGTTCACACCCCTGTGTC
GCAGACCAGCTGGaacccagccccactggaaaatttagcgaAAATTTAAT
CCCCAGTGGGAAAATTTTGCTGGTCCCCGGTGGGGAAATActcttgaatt
tcagccccactggaaattcaatatttaaaaattgtactccaaaaccaacc
ccactggatttttaaaccttgaaacaatagaattgaTATCCCCactggga
tttcaataggaatttttatccccactgaggaaaagaGTTCGGCCTGGGCT
TTGAGACAAAGGTTTGTATATCCTGGAGAGTCTTCATAGCGCGAAAACGC
ACGAGGAACTAGGATTTGTTCGACTAATGGGAAATTCAAATCAAACATAG
AGATTTCTTTCTATATGGGTTTCTTCTTCCAGACAACAAGATTTTCATGT
TGTAaagattcgagttatggagattttATATGGCTAAATGGTAAAATTTT
GATAagggaaattgtacttctgaaaacccaaagaTAAGGTAAATATTGGC
TAAAATCAGgatttttggagcaaaataaggccACTTCCTCTTTGCTaact
gaaaattttcgaaaaattaacatgAAATTAACaagcgtttatttggcacc
taagagaaGTTAGCCATGCAGCACTACTTACCAAGACTCatgccaaaatt
tttttttcatttttcagtgtTGAACTATTGGCGAAGACGTGATTTACTTC
GACAAAAAGATTTCTTACAACAATTGCGTGAAAATGACGAAAAAACTTTA
TACAAAATG Coding sequence (CDS) from alignment at sc0000090_pilon:1290662..1294320+ >XLOC_041458 ID=XLOC_041458|Name=XLOC_041458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000090_pilon:1290662..1294320+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATCCTTCATCACCATGAGATTGTCATCGATTCTTTTGATCGTTTTGTT
TGCAATCAATTTCTATGATATTCATGCTGCCTCTGGAAATGTCATCAAAA
CCATCCTTCATCACCATGAGATTGTCATCGATTCTTTTGATCGTTTTGTT
TGCAATCAATTTCTATGATATTCATGCTGCCTCTGGAAATGTCATCAAAA
aatgCCGTGATGTGATGGGCGCAGGGTATTGTGGGATACCAGGGATGTGT
GGCGTTTACAAGGGCGCTTGTGCAAAGACTTGTGGCGGATGTGGTGGGCG
GAAGAGGATTGTTGGTGAAAATGAAGAGGGGGATATGAACGACCAAAATT
ACAATAaatgCCGTGATGTGATGGGCGCAGGGTATTGTGGGATACCAGGG
ATGTGTGGCGTTTACAAGGGCGCTTGTGCAAAGACTTGTGGCGGATGTGG
TGGGCGGAAGAGGATTGTTGGTGAAAATGAAGAGGGGGATATGAACGACC
AAAATTACAATAtgtTGAACTATTGGCGAAGACGTGATTTACTTCGACAA
AAAGATTTCTTACAACAATTGCGTGAAAATGACGAAAAAACTTTATACAA
AATGtgtTGAACTATTGGCGAAGACGTGATTTACTTCGACAAAAAGATTT
CTTACAACAATTGCGTGAAAATGACGAAAAAACTTTATACAAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1290662..1294320 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 259-348:3570 |
| Aaloc | 103-255:2587 |
| Aaloc | 1-99:1 |
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