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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000119_pilon:89284..92886- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041437 ID=XLOC_041437|Name=XLOC_041437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3603bp|location=Sequence derived from alignment at sc0000119_pilon:89284..92886- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGGATTGGAAGTTTGAAAGTCGATTATCAAGTCTATGGAACCGAGGA
AGTTAACAATGAAACATTGAACGATGCATTGACGAAAGCTTTCACCTCTG
AACCCAATGTTCAATCTTTCACTGCAACTGATTCATTTACTGGTCAAATT
GATCCAGCAAGTCAAACACTCCAAGGTACAAGCATTATTTTTGTGAAGCC
TGGGGTTTACCGCATTGGATTCTCAGGCTAATAGTGTGTATCAATCCGGG
GAGGGGGCAGTTAGGCAAAATTGGGTACGGGGACATGGCCCCCGGCGTGC
AAATCGAATTGAGGGGGCCAAAAAAATGTGTCCACCATGGTTGGGCGACG
AAGAAAATTTTCGACTTTTTACCCTTATTTCACCCCTCTAAACGGTATAT
ATAAGATTTTTTAAAGTAAAAAAAAATACTTTGCAAAATATTGGGGGGGC
CATGCGGGGACGTGCCGCTGGTCAGGGTCCCTTTTTTAGGTTCTGACGAT
GTGGGAGTGTATAGCATAATATCACGACTATAGAACTGGTAAAAAACACA
GGAAGAAATCTTTAACCGACGTTGTAAAAACTCCAGATCATCTGCATTTC
AACGGATAATTTCTCATATTTACAGCTTTTAAATCCTCATTTTTTAGCTA
TTGATCATTGTTCGACAAACCCATGCCACGTCAATGCAACCTGTGAGAAC
AATGCATTAAAAAACACCTTCACTTGCAGATGTAAGGACGACAGTATCGG
AGATGGCTTTTCATGTTCCTACATCATTCATGTGAAAGTCAAGGAACAAG
TCACAGACAATGAATGTAAGTTCTAAATTTTATCATGAAATTATCATTCG
CTTTTGCTTGAATATCGCTTGTATCACTTTCAGCATATATTTTATTCCAC
ATTTGATGATATCCTAACAAAATAATCAGCGTATCATTAGCATTAAATGA
CTAAAGGACATTATTGAACGTATCTACCGTTTGCTTTCACATCATTTTGG
AACTCCAGCGCTGCACCAGCAAAAAAATCTGTGGAAAATCTATTGTTTAT
TTCTATGTCAAGCAAGCGTAGTGAGCGTAAGGCAACGAACCGTTAGCTTT
TAGAGTCATAGGTTGCTATATTTTAAGTAGTCTATTGTTTATTGTGTTTT
GTCAGAGGTGCGTCTCCTTTCTGTATAATAAAAAATAACTTTTACATACT
GGACTCAACTTGAAGTAACATAAATTCAATTCGCTTGTGTTTCCGGGTTT
CATATGTATCCAATATTTGTTTATCTAATCATTCAAATTTTATTCCACAT
AAATATTTATTTACTGTTCTCTTAAGTTCTCTACCGCTTACACGTTTTTT
ATATAAGAGCATCGAACATTTTTGAAGCCTTTGAATGTTCTTAACTTTTT
GAGATTTAAGCCTAAAAATGTTCTTAACATGTTCTTATTTTCACCATTTT
GCGGGTATTTTGTCTGTTTCCTAAGAAATCGGGTGTTTTGAAGTCCCCGA
AGCCTTGAAATGTTCTTTACTTGCTCTTAACATTTTGGCTATCGACGCCC
TATGTTCTATATATATAATTTGTTATTATAAAAAAAACTATTAAAATTCT
AACATAGATATTCATTACTTTTCATTTCATACAGGGTCAACAGATTCCAT
CATTATTGTTTCTGTTTTGTTTGCTGCTTGTTTCATCATCATTGTCATCT
TATCATTCTGTTTATGTTGCAGACAAAGTGATGGGTAAGATAACTTGTTT
CATCCAAAATGGTTATGATCGTTAGTAGAATCAAAGGAAAAATCAATGAA
ATATACTAACATCTATAAACCTTTATGTAGTTCTAACAATTACTACCTTA
TCGCCTCACTATATTTTATAACAGTAATAGTAATTTAGAATTAGGATTTA
GAAACAAAGCAAGTTATTTCCGTTGTAGAGAGCGCATACCAACAAAATGT
AAAAGAGCTGAATCAATTTCATAATTTTATTTGTAAAAGTGAAAAATATT
CACTACTGTCAGTTTCACACTGAACGATTGTCAAGTGTAAAACTAGAATT
AAGATTTAAAGTGACATAACAGTAGTAAAGTGTAAACATTGCACGAACCA
CGTGTCATTAAAGAGAACAATTAAAATCACGTGTCTAAAACAAACTTGTA
AAACAATTGAAACAATCAAAATCAGCCATATTTGGTTTGATTTTTTTTTA
ACATGTAACATTTGTTTTGATTTTGTATCCCGCTGCGTACGTGTTTACAA
ATTTCGTCAGTACTTTAATGCCCCTTTAATATGTTTTATAAAAAATGCAG
CCTCTTTATCTGATCTTCGACAATAAAAAGCCAAAACTTTTTCTTGAAAT
CTATAATAAAATATAAAATATGAATTATAAAATAAAAAATATTGGACTAA
AGGATCAGCTTACTAAAGACCATTACAGGACATGCATTTTGAACACATGT
GTCTGAACTTGATTTACCATTTCATTTCTTTAGATACAGCACAAGAAAAG
GAGTTTTCATTCGTGGCCAGAACTATGATAACTACTATTCAACAGATGCA
CCATCAATAAAAGAAAAGGGACACTCGCTTCCTGTTGCTCAGAATATGTA
TATGACATCTGATCCTTCCGAATTGAAAGATTCATCGACATTCACTGATA
AAGTACAAGTAAGTATTACTTCAAAGACTTACACGCTACTTTATGTAAGA
AAAATTTCTAGGCTGAACATTAACCAAATCATCATAAGAATACTTTAAGA
ATATCTTTTGGGTGAGGTGGAAAGTTAAAGGAAGCATGCTATAGGCAGCA
AATGACATGGAGTTTTTATAAGATACTTTAATAATTGGTCATTTGAAGTA
ATAAAAATGACGCGTTCTTTAGAAAAAGTAACAAAATTGTTTTATTACTG
GTTAACGACCAACCAAATCAAATAAGAGCTCCAACTCGTCCCATAGGCAG
TAGCGTAATTTTTTTCGGAGAGCAGATTTCTATGACACTGTAATTATATT
TTTTTATTGTGAATAGATAGTAAGAGTGTCATAAAATTCTGCTCTCCTAC
AAAGATTTTGCGCCCCTCTTGGCTATGCTACTGAATAGGACATACAAGGA
ACGTATCATTGGTCACATATCCAGCTTCAAAACTACGTATTCAATATAAT
TTCCTGCTATTGAGTTATCCAAAAAGATTGACTAAAGTAGCAATTAAAAA
GTCTCAAATACATACTATTAAGTCACATCGCGTGTTGGCTGCATGCGTCC
CCTCTGGTATATTCTGATATAGGGTATACTAATCGTGTATAAAATTCCCG
TCCGAGAGTTTCCCTTAAATTTCGGTAACCTATGTCAATTTTCACAAAAA
GGTTTAGAAATTCAATGATTGTATGAACATCTAGCCATTCATAATTTAAA
TCTTATGATATTTAAAGATTTCTCACACGAATCTTACTAACCAAGCTTCT
AAAACTCCAAAACACAAAGACAGGGGTAACTCTCGGACGGGAATTTTAAA
CACGATACTACATCAAATTGTGCTTGAATATTTTTGCTTTGATTTTATCT
AGATGTCAGAAATGTCAGATTTGGACAAGAAGAATTCGAACTTCGTGATG
TAA Coding sequence (CDS) from alignment at sc0000119_pilon:89284..92886- >XLOC_041437 ID=XLOC_041437|Name=XLOC_041437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000119_pilon:89284..92886- (Clytia hemisphaerica_ch_hm2_pilon)
TTCAGGATTGGAAGTTTGAAAGTCGATTATCAAGTCTATGGAACCGAGGA
AGTTAACAATGAAACATTGAACGATGCATTGACGAAAGCTTTCACCTCTG
AACCCAATGTTCAATCTTTCACTGCAACTGATTCATTTACTGGTCAAATT
GATCCAGCAAGTCAAACACTCCAAGTTCAGGATTGGAAGTTTGAAAGTCG
ATTATCAAGTCTATGGAACCGAGGAAGTTAACAATGAAACATTGAACGAT
GCATTGACGAAAGCTTTCACCTCTGAACCCAATGTTCAATCTTTCACTGC
AACTGATTCATTTACTGGTCAAATTGATCCAGCAAGTCAAACACTCCAAG
CTATTGATCATTGTTCGACAAACCCATGCCACGTCAATGCAACCTGTGAG
AACAATGCATTAAAAAACACCTTCACTTGCAGATGTAAGGACGACAGTAT
CGGAGATGGCTTTTCATGTTCCTACATCATTCATGTGAAAGTCAAGGAAC
AAGTCACAGACAATGAATCTATTGATCATTGTTCGACAAACCCATGCCAC
GTCAATGCAACCTGTGAGAACAATGCATTAAAAAACACCTTCACTTGCAG
ATGTAAGGACGACAGTATCGGAGATGGCTTTTCATGTTCCTACATCATTC
ATGTGAAAGTCAAGGAACAAGTCACAGACAATGAATGGTCAACAGATTCC
ATCATTATTGTTTCTGTTTTGTTTGCTGCTTGTTTCATCATCATTGTCAT
CTTATCATTCTGTTTATGTTGCAGACAAAGTGATGGGGTCAACAGATTCC
ATCATTATTGTTTCTGTTTTGTTTGCTGCTTGTTTCATCATCATTGTCAT
CTTATCATTCTGTTTATGTTGCAGACAAAGTGATGGATACAGCACAAGAA
AAGGAGTTTTCATTCGTGGCCAGAACTATGATAACTACTATTCAACAGAT
GCACCATCAATAAAAGAAAAGGGACACTCGCTTCCTGTTGCTCAGAATAT
GTATATGACATCTGATCCTTCCGAATTGAAAGATTCATCGACATTCACTG
ATAAAGTACAAATACAGCACAAGAAAAGGAGTTTTCATTCGTGGCCAGAA
CTATGATAACTACTATTCAACAGATGCACCATCAATAAAAGAAAAGGGAC
ACTCGCTTCCTGTTGCTCAGAATATGTATATGACATCTGATCCTTCCGAA
TTGAAAGATTCATCGACATTCACTGATAAAGTACAAATGTCAGAAATGTC
AGATTTGGACAAGAAGAATTCGAACTTCGTGATGTAAATGTCAGAAATGT
CAGATTTGGACAAGAAGAATTCGAACTTCGTGATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119_pilon | genome | sc0000119_pilon:89284..92886 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-669:52 |
| Aaloc | 445-618:1120 |
| Aaloc | 346-441:1968 |
| Aaloc | 178-342:2955 |
| Aaloc | 1-174:3604 |
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