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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000119_pilon:174187..177153- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041433 ID=XLOC_041433|Name=XLOC_041433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2967bp|location=Sequence derived from alignment at sc0000119_pilon:174187..177153- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAAAGCGTT
GAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATCAACCAA
CACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGACGTT
GTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCTTATTCC
AGGTTCGTTCCAATCATGGTCGATTGAGATAATAATCTATTGAGAATTAA
GCTTATGTCCTCGTTTTTCAAAATTTGGAGTTCGGACGCGAAAGTCGATT
TTGGGCCATTTCTTAAATTTAATCGGGCATTTAAATTTGGCTTGGGTTTA
TAGACTTCTAGGTTATATATTTTGAGCCTTATTGAACCATCTTTAAACGT
TTGGATCCTCAGATCTTCAAGTCTTAAGTCTCATGTTAAGGTTCGTTACC
ATGTTTTTTTCTTATAAGCAAGTGTACGCCCCTTGGTTAGGCTCGTGTAT
GCTTCAAAGTTCTTAAAGCATCCAGGCATAGCTTATGCTTATTATATGAT
TATGAATCATGCTTATGATTCACCTCGAGCCAATTTTGTAGAGGAATTTC
AGAAATTTTTTAAAAATTTGTTCAGATTTTGGGAGCAGTGGAATATAGTT
ACCCCCTTCGAAAAATGAAAAAACACCCCCTAGAAATTAAATTTTCCTTA
GATTACCCTCTGGAAATGTTTGTCCATCCCCCCACTCTTTAGATATAAAA
TGTTCGTCCATCCCCCCCACTCTTTAGATATAAAATGTTCGTCCCTCCCC
CCCCCCACTCTTTAGATATAAAATGTTTGTCCACCCCCCCCCCCCACTCT
TTCGATATAAAAATGCTCGTCCATCCCCCCACTCTTTAGATACAAAATGT
TTGTCCATCCCCCCCCCCACTCGTTAGATATAAAATGTTTGTCCATCCCC
CCCCACTCTTTAGATAAAAATGTTTGTCCATCCCCCCCACCTCTTTAGAT
AAAAATGTTTGTCCATCCCCCCCCCACTCTTTAGATATAAAATGTTTGTC
CATCCCCCCCCCACTCTTTAATATAAAATGTTTGTCCATTCCCCCCACTC
TTTAGATATAAAATGCTCGTCCATCCCCCCCACTCTTTAGATATAAAATG
TTCGTCCATCCCCCCACTCTTTAGATATAAAATGTTTGTCCATCCCCCCC
CCCTCTTTAGATGTAAAATGTTTGTCCATCCCCCCCCCACTCTTTAGATA
TAAAATGGAATGGCATATTAAAGCTCCGAAAACGCAACTCGATGATAAAG
TATCAAATTAACCGTTCACCACAATTTATGTGCGTCATTAATTTTAAATA
TTTTTTTCCTTTCCAGTGATCGAGATGTTACAAAACCGCGAAGAAAAGCT
CAAGAAACACGACATCGGAGCTCTTATCCTTTCCCCTACACGAGAACTCG
CTATCCAAATCAACAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTA
ACCAGTAACTTGATTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAA
ATTCAACGAAGAAGGAGGTCACATCATAGTCGCAACACCAGGGAAATTTG
CCAAAATGGTGAAAGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTG
AAAGCGTTGGAAATTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACA
AGCCAACTTTCGTGAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGC
AACGCCGCACTAGCCTCTTTTCTGCTACACAAACTACAGAAATCGAATCG
TTCATTCGTGCTGGGCTACGGAACCCAGTCCAAGTTGTTGTTCGTGAAAA
GCGTGCTCAGAATGTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCT
ATTTCGTTTGCGAAGCTGACTTCAAACTCCAACGACTTGTCGCACTACTT
CGACAACATCGTGACGAAAAATTCATCATATTTTTCAACACGTGCGCATG
CGTGGATTATTTCACAAAATTATTAGCCATACTTTTGAAGAACATTCCAA
TTTTATCTATCCACGGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAA
TTTCAAGATATAAAACATGGGATTTTGACCTGCACTGATGTCATGGCTCG
AGGTATTGACATACCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCT
CCAATGTAGAGGCGTTTGTTCATCGGTGTGGGCGGACCGCCCGTATGGGA
AATATAGGTAAAGCTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACAT
CGATTTTGTTAAAATCAATCAAAAAGTTCAAATCGATGAATATGAGGGAC
AGAATATCATTGATGACTCTTACAGCATGTCTCACAAGATTCGTAAAATT
GCTTCCAAAGACCGCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTC
GTTTATCCAAAGTTATATTAAGCATCAATGCAATATCGTCTTACAAATGA
AGGAGCTAGATATTTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTA
CCGAAAATGCCGGAGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGGT
GGATGTTGATACGACACTGATTAAGTATCAGGATAAGGTGAGAGAGAAAG
CCCGTCTCGAGAGGGTTGAAAAGGAGACGGAAGCTGCAAAGGAGAAGGCT
ATCGAGAAAGCGAAATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAG
CTGGTCTAGACAAAAAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGA
AACAGACTTTGAAAAGGAAATTGAAGGACGATGGCGATGACGATGTTGAT
GATGTTGATGATTTGATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAA
AGGGAAAATCACTGAAAAACAATATCAAGAGCGAACGAATGAAGAGGAAT
TGTTGTCTGATTCTTAG Coding sequence (CDS) from alignment at sc0000119_pilon:174187..177153- >XLOC_041433 ID=XLOC_041433|Name=XLOC_041433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3606bp|location=Sequence derived from alignment at sc0000119_pilon:174187..177153- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAAAGCGTT
GAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATCAACCAA
CACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGACGTT
GTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCTTATTCC
AGATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAAAGCG
TTGAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATCAACC
AACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGACG
TTGTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCTTATT
CCAGTGATCGAGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGA
CATCGGAGCTCTTATCCTTTCCCCTACACGAGAACTCGCTATCCAAATCA
ACAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTAACCAGTAACTTG
ATTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGA
AGGAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGA
AAGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAA
ATTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCG
TGAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTA
GCCTCTTTTCTGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCT
GGGCTACGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAGCGTGCTCAGAA
TGTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCG
AAGCTGACTTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGT
GACGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTT
CACAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCC
ACGGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATA
AAACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACAT
ACCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGG
CGTTTGTTCATCGGTGTGGGCGGACCGCCCGTATGGGAAATATAGGTAAA
GCTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAA
AATCAATCAAAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTG
ATGACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTTCCAAAGAC
CGCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAG
TTATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATA
TTTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCG
GAGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGGTGGATGTTGATAC
GACACTGATTAAGTATCAGGATAAGGTGAGAGAGAAAGCCCGTCTCGAGA
GGGTTGAAAAGGAGACGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCG
AAATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACA
AAAAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGA
AAAGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGAT
TTGATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCAC
TGAAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATT
CTTAGTGATCGAGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACG
ACATCGGAGCTCTTATCCTTTCCCCTACACGAGAACTCGCTATCCAAATC
AACAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTAACCAGTAACTT
GATTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAG
AAGGAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTG
AAAGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGA
AATTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTC
GTGAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACT
AGCCTCTTTTCTGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGC
TGGGCTACGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAGCGTGCTCAGA
ATGTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGC
GAAGCTGACTTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCG
TGACGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATT
TCACAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATC
CACGGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATAT
AAAACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACA
TACCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAG
GCGTTTGTTCATCGGTGTGGGCGGACCGCCCGTATGGGAAATATAGGTAA
AGCTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTA
AAATCAATCAAAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATT
GATGACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTTCCAAAGA
CCGCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAA
GTTATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGAT
ATTTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCC
GGAGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGGTGGATGTTGATA
CGACACTGATTAAGTATCAGGATAAGGTGAGAGAGAAAGCCCGTCTCGAG
AGGGTTGAAAAGGAGACGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGC
GAAATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGAC
AAAAAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTG
AAAAGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGA
TTTGATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCA
CTGAAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGAT
TCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119_pilon | genome | sc0000119_pilon:174187..177153 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 205-1803:1600 |
| Aaloc | 1-201:2968 |
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