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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000997_pilon:5726..9083+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041432 ID=XLOC_041432|Name=XLOC_041432|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3358bp|location=Sequence derived from alignment at sc0000997_pilon:5726..9083+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGAAGGAAAACAGAGTCAATTTCGCCGCGAAGAAGAGGAGATTGC
CAAAGGTGCCAGAGCCATGGAGGATCCTAAAAGATGTTCAATTTGTTTAC
AACCAAAAACTCCGAATTCTTCATCCAACAAGTGTGATCAATGTTTggat
aaaataaacaaagttcCAACAGGATTCGCTTTCAGGGCGGTGGAAGGCCA
GGGAGataaagaattcgaatgtcccATTTGTTTGTGTTTAATCAAAGGAG
CAACTGAGCTCCCTTGTGAACATTTGATGTGTGGGGGATGTTTGCTTCAC
TATGAGAAAGGACAAACTGAGAAAGCGGAAAAGtaagttcaaactttttt
tttatttagaaaaatcataatCTTTTCTAGATGTCAAGTTGACCCAgaat
tgatttttcaagttaaaaaagcttttatatttttctcagaTGCCATCAAA
ACTTTAGTAGAAGATGAAAATAGTgataatttgaaacttaaattgGGTTG
AGAGAAGACATAGAATTCAGTCTTAATTTACTTCTAGTTTTCATCCTTTA
AAATAAAGAgcagtgttttgatttttgaaatgaacagatacacgcttttt
tttataagaatatcttctataagaatatcagggtgaaaattggccaaatc
gtaagaataccctaagaatgcCATCGAGGGtgaatttcataagaatacag
tcattttgtatatttggttaacagaaaaatctgcttcctttgttagagat
gaAGCTTCgtggaagaaatgtaattttaacccaaatgcaAAACTCTCAat
ttgatcatttctcatgtttgtaaaaaagtcaagtctgaaaaagtaagaat
gcgttaagaatatttcaccctcaattttggcactttcttaagaatacttg
acccttaTCCAAAGtaaactattcttataaaaagaagcgTGTAATATTGG
ACAAATTTAAGAAGAAATTAATCTTTCTTTTCAGGGAAGAGCCGAAGAAA
AATCCAGAATTTCTTTGCAGTGTATGCATGACACCTTACAAAGTTCAAGA
CGTGAGTTATCTATTTCAGTATTTTTTATTGCGTGCAGAAGGACTGGTAT
AACTCATATAGATTTCGATACACTCCTGGGTGccttgatttgaaaaattg
caaatttagagatctttcaaattcaaaacgCTTCTACGAAAGGGTCGGCG
AGGTAGTTAGACTGTGTGatgataattttctttctttgtcgGTATTTGAA
GAAAAGTGACGATGTTTAGGTGTCAAACGTGTCATGTGTtgacaaaataa
taatttctgcAATTCTTCACATCTAAAGTTGATAAGAGTAAGAGTTGCTA
CCCAcctaaaaaagttctttattttcactttttcagaaaaagtcgGTAAA
GTCCACTGATCGTTTTATACAAAACACGATCAGGGTTCATTGCATGCAAA
AAGATTGTCCGTGGATTGGTTCCATCAAGGATTACGAGGTAAATTCACAA
Acacattcttttttattttactagccataactttcattaatgtgccaccg
cagcaaaacgaacacatagagttgaatttgcgttcaaaaggaatgatctt
agccctacagtaatttttgttaagagcgacctctcatctgagacaaaact
ctttcaaatgctaacaaatgtgtcaagggagtgatttacagtctacttag
agtgacatccgtgccttgtcttacacgttttttataagagcaatttcata
agaatacgaggttgaaatttggccaaaaccttagaacaaattaagaagaa
tctgagcctcagatttcagaaattactgagaagtacaggtTTCCATTCtc
attaatattgacatttaagcctgaaaaactcatataaaattaagagcagc
ccagcccgaatcatatgacttactggtttttcctttaaaaagcgtatatc
tgaagatactgctcttcatatgttattttactctaatgtacacgtttaac
AACATAACTGTTCGAGTACTTTGAGTAGAAGAGttatatttttaacctat
gaagagcgcttaataactacttgtggtataaaaagggaactTCCCAGAAA
AgagaatttccttagattcctTAACtttccagggataagaaaaagacaaa
ctgagatttcaaaatgagtaatcagatgaaaataactccgaaaagtcttt
ttgataatgataaaactatagagagaccgtaagataagaatgctaccgtt
aagcggaacttatatactgaaaaacgcgcgcaaaaacaaacgcaaaatta
tgagatgtttgcccaacttccttatgcgtaaAGCTATTAATGCCATCCTC
GGGAgctttaggctccctgcggtggcaataagAACCATTTTGtagaggct
cggctgttcttaaaCTCGAAAAACTGTTTATCTTCTCTGCCCTTTGTTCC
TTTTGCTATGACACAAACGAATTAAGactaagggctctgaccatagtgaa
tttttcataattaccatgtttaaaatgtgttttctgactgatgtaaccaa
caaaactatggcatgttatacattttctgttagacaaactattcctgaat
ctgaaaattcaaaaattgcattgaagaaatttgatgaagaagaaaatagt
ggtttttcatcaattcttcatctgtattttccttaaaaaaacagtcataa
cttttgacacatctttttagaaaaactttccgcaaaatttaaaataattc
aattctttgcggacagtttgaaaaaaattccaaacaaaaaggttaattac
ccattaaaacttagcactttttataaaagaaggtgatgcaacatattatt
aacgtctttttaaagttcataacgtcatttttgcaattaagttcttaatt
actcttgagGGGTTTGACTAAAAAGTAATTTATAAAGACAATTCTTTGtg
aaaagtgttaaagaatctaaaacataacttttatgttcagatactaaaat
caattttctgactatggtcagagcccttaaggccggtctccactttcgcg
cgacataagcgaaaactttttgacgtttttgtaagatcattggtcggttg
aaaaatgaagcaattccattggtagaAATTGACGttacggatgaaaaaag
tagaacttccttcattttttttttgatcgcgtcaaacttttttatgacgt
aatcttttcttcaggcaaaaaatgCTAGTaaaaaaaaCGGTCGCCCATTC
CGCGCGAAAGTCCGGCCTTTatatccttttttatttttttaggttCATGT
TAAGAAATGTGACTATAATGGCAAAATAAAATGCCCATATTTCGAGTTGG
GTTGTCTC Coding sequence (CDS) from alignment at sc0000997_pilon:5726..9083+ >XLOC_041432 ID=XLOC_041432|Name=XLOC_041432|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000997_pilon:5726..9083+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCGAAGGAAAACAGAGTCAATTTCGCCGCGAAGAAGAGGAGATTGC
CAAAGGTGCCAGAGCCATGGAGGATCCTAAAAGATGTTCAATTTGTTTAC
AACCAAAAACTCCGAATTCTTCATCCAACAAGTGTGATCAATGTTTggat
aaaataaacaaagttcCAACAGGATTCGCTTTCAGGGCGGTGGAAGGCCA
GGGAGataaagaattcgaatgtcccATTTGTTTGTGTTTAATCAAAGGAG
CAACTGAGCTCCCTTGTGAACATTTGATGTGTGGGGGATGTTTGCTTCAC
TATGAGAAAGGACAAACTGAGAAAGCGGAAAAATGAGCGAAGGAAAACAG
AGTCAATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCAT
GGAGGATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTCCGAATT
CTTCATCCAACAAGTGTGATCAATGTTTggataaaataaacaaagttcCA
ACAGGATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGataaagaattcga
atgtcccATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTG
AACATTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGACAAACT
GAGAAAGCGGAAAAGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAG
TGTATGCATGACACCTTACAAAGTTCAAGACGGAAGAGCCGAAGAAAAAT
CCAGAATTTCTTTGCAGTGTATGCATGACACCTTACAAAGTTCAAGACaa
aaagtcgGTAAAGTCCACTGATCGTTTTATACAAAACACGATCAGGGTTC
ATTGCATGCAAAAAGATTGTCCGTGGATTGGTTCCATCAAGGATTACGAG
aaaaagtcgGTAAAGTCCACTGATCGTTTTATACAAAACACGATCAGGGT
TCATTGCATGCAAAAAGATTGTCCGTGGATTGGTTCCATCAAGGATTACG
AGgttCATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCCCATAT
TTCGAGTTGGGTTGTCTCgttCATGTTAAGAAATGTGACTATAATGGCAA
AATAAAATGCCCATATTTCGAGTTGGGTTGTCTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000997_pilon | genome | sc0000997_pilon:5726..9083 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 526-564:3320 |
| Aaloc | 502-525:3293 |
| Aaloc | 400-501:1387 |
| Aaloc | 334-399:986 |
| Aaloc | 1-330:1 |
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