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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000090_pilon:1184025..1186750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041421 ID=XLOC_041421|Name=XLOC_041421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2726bp|location=Sequence derived from alignment at sc0000090_pilon:1184025..1186750- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATCAAGTGAATATTGCAGGTATCGCTAATCAAACGAATATGGC
AGGTATCATGCAGAAGGTTTTGTCTTTGAAACCATTACCAATCGATCCAA
CCAGATGTACTCCCAACAAATCGTTGTATCAGCAGATTCTCAATAACAGT
CAAGCCACGTCAGAAAGACAAGCAAAACAGTTCAACTTGGGGAATTCGCA
CTGTACAGCAAACCCTATGCATGCAGCCGACTTCGTTCTTGAAAGGGAGT
ATGGAGACAGTTCTCTCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATA
CCACCCACGTTTGTTTCGAATCAATACAAAAAGTCTTCTTTTGCTATCCT
TAATTATGACGTCAAAAAAGACATTGACAGACTTTTGGTTAATTTGAAAC
AACATTCACCAACGTATTGGCTGACCAAAGAATTGGAAACTTTTATGCAA
ACACAAAACAATGCTGATTCTATCGACAAGAAGGCGTTTGGGAAATGGAT
TCTTAACCTTCAAATCATGTATCTGGCAATTAGTGAACTGAAAACTGACC
AAGTGACCCTACCACAAACCACTTTGGATATAGGAGTTTTCGTTCAAGGA
TGTCTTGCCGTGCTCTTTCCTACATCACCTCTGGGAACACTTCTTCAACA
AAATCTCTTCACCAAAAACCTCAAAAAACTGATCAAGCAAATGATTGAAG
AAACACCAAGCAAAGATTCAAACCTTGGATGGCTATTCACTTTGGAACTG
TCAGAAGTTGGTGAAAAGCTGGAACACTGGTTATATGACCAGCTTCTACC
ATTGAAAGATGACAATCTCCAAAACACAGTCGTTCTTTCTTCACTCATTT
TTCTGACAAATGTGCAAAAAAAAATGCATAAAGAGACAGATTTTCTAATC
ATATCTTGGGAACGGAAGCTTATCATTTCAATCGAGCTGAAAAGAACAAT
CGCAGATGATAAAGTCTTCAAGCAGTTGGAATCAAACCATCGGGTTTTCG
AGGAAAGATTAGGGGACCAATTGATTTCAGGTTGGACGTATTTTCCGGTG
GTCGGCGTGGAGAACGACAACCTTTCAGTAAAAAGTCAGCATTATATCAC
AATCCAAACTGAAATAAAACAATGGCTGACCAGTGTCTTCAAAAGGTTCC
CGACAATTCCAGCAGTGTCCATACCGAATCCATTGGACGAAGCTAAGAAG
CTACTCAAAATCCTGGTCTTTGCCATTCACGTTTCGAAAAAAGATCAAAT
TGCACATATTACTAGCTCAACATGGGTCGAATACACCAGCAACGCTATCG
AAAATGTTTCAACTAGCCACAACATTTTATTCTACTCCAACCAACAGATG
GCAATCATGAACAACGATGAACCAAGCTACAGGAGAGTGGTCATTAGTGG
GCCTTTTGGTGTTGGAAAATCAATCTTACTTACACAGAAGGCCATACAAT
TAAACAAACGACCTGAATACAATGGAAAAGTTATGATTGTTGTTGATTCG
CATTCTTACAAAACTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTT
GGAGAATCAACATGGAATATTTGTTGAAGATTTGAGTTCGGTAGGTAATC
AATTTTCTTATAATTGTGAGTATGACAGTCATTATAAAAATGATCTTCCT
TCTTCAACTGCGATGTAAAATCTAAATTCTTGAGGATGGTTCCTTCTTTC
AAGTTTTCAAATCCTTTGTGTTTTTTCAAATTGAGTAAGAGAATTATTTT
CCGTTTTTTCATTTTATAGTCATCTCAAAAAGGTCATCATCTTGAAACAA
TCAAAGCACGGAAAATCAAAGCATTGTTCATCGATTAATTTGAAATTTCA
AAAAAATAAATAAAGGATGCTCGAAAATCGATTGGATATTTTTAAGTCTT
ATATAATCGGTGTTTATCATTCATTTCACAGGATCAGAACGTTCGCATTC
GTTTTGTTGAGATGATTAAAACACGGAAAATCAAAGCATTGTTCATCGAT
TAATTTGAAATTTCAAAAAAATAAATAAAGGATGCTCGAAAATCGATTGG
ATATTTTTAAGTCTTATATAATCGGTTTTTATCATTCATTTCACAGGATA
AGAACCATTACATTCGCATTGTTGAGATGATAAAAAGACGGAAAATCAAA
GCATTGTTCATCGATGAATTTAAAGTGTGGTCAGAAACCATGAAATCACA
AAACAAAAAATGGATAAAGGAGGAGGTGATGCCACTCGTTGACTACTTAT
GGATCGTCCCATCGACAGAAAGTTTGAGTAAAGGAAATTACCAAGAATTT
TCGACTGACTTTTTGTTCGTCAATCTTGAACAGAATTTTAGGAATTCTCA
ACAGATTGTTAAAGCAACCAAATCTGTAGCCGAGGAGAAATATTATGACT
ACAAACAAGGGATCGTCATGCCACTTGGTAATTTTCCGGATGGTTGCGAG
CCAATATTTGTTGACACGTTCGAAGAAGCAGTGATAGAAGCGAGAAAACG
AACAAATGAAGGAATCCTTCTGATAAATAGTTACAGAATCGATGCAAATT
CTTATTCTGAGGTTCTAGATCGGTTGAACGAGAATTATAAAGTATATCAC
GGTACAAAAAATGATTTTAAAGAGGGAGAAAGTCCGTATAAGTTTCTTCA
GGAAGGAAACATTTTGATCATTGAGGAATTTACATCTTTTGGATTTGACT
GGCCGACAGTTATTGTATTAGAACAA Coding sequence (CDS) from alignment at sc0000090_pilon:1184025..1186750- >XLOC_041421 ID=XLOC_041421|Name=XLOC_041421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4440bp|location=Sequence derived from alignment at sc0000090_pilon:1184025..1186750- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAATCAAGTGAATATTGCAGGTATCGCTAATCAAACGAATATGGC
AGGTATCATGCAGAAGGTTTTGTCTTTGAAACCATTACCAATCGATCCAA
CCAGATGTACTCCCAACAAATCGTTGTATCAGCAGATTCTCAATAACAGT
CAAGCCACGTCAGAAAGACAAGCAAAACAGTTCAACTTGGGGAATTCGCA
CTGTACAGCAAACCCTATGCATGCAGCCGACTTCGTTCTTGAAAGGGAGT
ATGGAGACAGTTCTCTCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATA
CCACCCACGTTTGTTTCGAATCAATACAAAAAGTCTTCTTTTGCTATCCT
TAATTATGACGTCAAAAAAGACATTGACAGACTTTTGGTTAATTTGAAAC
AACATTCACCAACGTATTGGCTGACCAAAGAATTGGAAACTTTTATGCAA
ACACAAAACAATGCTGATTCTATCGACAAGAAGGCGTTTGGGAAATGGAT
TCTTAACCTTCAAATCATGTATCTGGCAATTAGTGAACTGAAAACTGACC
AAGTGACCCTACCACAAACCACTTTGGATATAGGAGTTTTCGTTCAAGGA
TGTCTTGCCGTGCTCTTTCCTACATCACCTCTGGGAACACTTCTTCAACA
AAATCTCTTCACCAAAAACCTCAAAAAACTGATCAAGCAAATGATTGAAG
AAACACCAAGCAAAGATTCAAACCTTGGATGGCTATTCACTTTGGAACTG
TCAGAAGTTGGTGAAAAGCTGGAACACTGGTTATATGACCAGCTTCTACC
ATTGAAAGATGACAATCTCCAAAACACAGTCGTTCTTTCTTCACTCATTT
TTCTGACAAATGTGCAAAAAAAAATGCATAAAGAGACAGATTTTCTAATC
ATATCTTGGGAACGGAAGCTTATCATTTCAATCGAGCTGAAAAGAACAAT
CGCAGATGATAAAGTCTTCAAGCAGTTGGAATCAAACCATCGGGTTTTCG
AGGAAAGATTAGGGGACCAATTGATTTCAGGTTGGACGTATTTTCCGGTG
GTCGGCGTGGAGAACGACAACCTTTCAGTAAAAAGTCAGCATTATATCAC
AATCCAAACTGAAATAAAACAATGGCTGACCAGTGTCTTCAAAAGGTTCC
CGACAATTCCAGCAGTGTCCATACCGAATCCATTGGACGAAGCTAAGAAG
CTACTCAAAATCCTGGTCTTTGCCATTCACGTTTCGAAAAAAGATCAAAT
TGCACATATTACTAGCTCAACATGGGTCGAATACACCAGCAACGCTATCG
AAAATGTTTCAACTAGCCACAACATTTTATTCTACTCCAACCAACAGATG
GCAATCATGAACAACGATGAACCAAGCTACAGGAGAGTGGTCATTAGTGG
GCCTTTTGGTGTTGGAAAATCAATCTTACTTACACAGAAGGCCATACAAT
TAAACAAACGACCTGAATACAATGGAAAAGTTATGATTGTTGTTGATTCG
CATTCTTACAAAACTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTT
GGAGAATCAACATGGAATATTTGTTGAAGATTTGAGTTCGATGGCTAATC
AAGTGAATATTGCAGGTATCGCTAATCAAACGAATATGGCAGGTATCATG
CAGAAGGTTTTGTCTTTGAAACCATTACCAATCGATCCAACCAGATGTAC
TCCCAACAAATCGTTGTATCAGCAGATTCTCAATAACAGTCAAGCCACGT
CAGAAAGACAAGCAAAACAGTTCAACTTGGGGAATTCGCACTGTACAGCA
AACCCTATGCATGCAGCCGACTTCGTTCTTGAAAGGGAGTATGGAGACAG
TTCTCTCTTTGTTCAAGGTGAACGCACCAGTGTTTTCATACCACCCACGT
TTGTTTCGAATCAATACAAAAAGTCTTCTTTTGCTATCCTTAATTATGAC
GTCAAAAAAGACATTGACAGACTTTTGGTTAATTTGAAACAACATTCACC
AACGTATTGGCTGACCAAAGAATTGGAAACTTTTATGCAAACACAAAACA
ATGCTGATTCTATCGACAAGAAGGCGTTTGGGAAATGGATTCTTAACCTT
CAAATCATGTATCTGGCAATTAGTGAACTGAAAACTGACCAAGTGACCCT
ACCACAAACCACTTTGGATATAGGAGTTTTCGTTCAAGGATGTCTTGCCG
TGCTCTTTCCTACATCACCTCTGGGAACACTTCTTCAACAAAATCTCTTC
ACCAAAAACCTCAAAAAACTGATCAAGCAAATGATTGAAGAAACACCAAG
CAAAGATTCAAACCTTGGATGGCTATTCACTTTGGAACTGTCAGAAGTTG
GTGAAAAGCTGGAACACTGGTTATATGACCAGCTTCTACCATTGAAAGAT
GACAATCTCCAAAACACAGTCGTTCTTTCTTCACTCATTTTTCTGACAAA
TGTGCAAAAAAAAATGCATAAAGAGACAGATTTTCTAATCATATCTTGGG
AACGGAAGCTTATCATTTCAATCGAGCTGAAAAGAACAATCGCAGATGAT
AAAGTCTTCAAGCAGTTGGAATCAAACCATCGGGTTTTCGAGGAAAGATT
AGGGGACCAATTGATTTCAGGTTGGACGTATTTTCCGGTGGTCGGCGTGG
AGAACGACAACCTTTCAGTAAAAAGTCAGCATTATATCACAATCCAAACT
GAAATAAAACAATGGCTGACCAGTGTCTTCAAAAGGTTCCCGACAATTCC
AGCAGTGTCCATACCGAATCCATTGGACGAAGCTAAGAAGCTACTCAAAA
TCCTGGTCTTTGCCATTCACGTTTCGAAAAAAGATCAAATTGCACATATT
ACTAGCTCAACATGGGTCGAATACACCAGCAACGCTATCGAAAATGTTTC
AACTAGCCACAACATTTTATTCTACTCCAACCAACAGATGGCAATCATGA
ACAACGATGAACCAAGCTACAGGAGAGTGGTCATTAGTGGGCCTTTTGGT
GTTGGAAAATCAATCTTACTTACACAGAAGGCCATACAATTAAACAAACG
ACCTGAATACAATGGAAAAGTTATGATTGTTGTTGATTCGCATTCTTACA
AAACTAAACCCATGCAATTTCATCGTCTGAAGGTTGACTTGGAGAATCAA
CATGGAATATTTGTTGAAGATTTGAGTTCGGATAAGAACCATTACATTCG
CATTGTTGAGATGATAAAAAGACGGAAAATCAAAGCATTGTTCATCGATG
AATTTAAAGTGTGGTCAGAAACCATGAAATCACAAAACAAAAAATGGATA
AAGGAGGAGGTGATGCCACTCGTTGACTACTTATGGATCGTCCCATCGAC
AGAAAGTTTGAGTAAAGGAAATTACCAAGAATTTTCGACTGACTTTTTGT
TCGTCAATCTTGAACAGAATTTTAGGAATTCTCAACAGATTGTTAAAGCA
ACCAAATCTGTAGCCGAGGAGAAATATTATGACTACAAACAAGGGATCGT
CATGCCACTTGGTAATTTTCCGGATGGTTGCGAGCCAATATTTGTTGACA
CGTTCGAAGAAGCAGTGATAGAAGCGAGAAAACGAACAAATGAAGGAATC
CTTCTGATAAATAGTTACAGAATCGATGCAAATTCTTATTCTGAGGTTCT
AGATCGGTTGAACGAGAATTATAAAGTATATCACGGTACAAAAAATGATT
TTAAAGAGGGAGAAAGTCCGTATAAGTTTCTTCAGGAAGGAAACATTTTG
ATCATTGAGGAATTTACATCTTTTGGATTTGACTGGCCGACAGTTATTGT
ATTAGAACAAGATAAGAACCATTACATTCGCATTGTTGAGATGATAAAAA
GACGGAAAATCAAAGCATTGTTCATCGATGAATTTAAAGTGTGGTCAGAA
ACCATGAAATCACAAAACAAAAAATGGATAAAGGAGGAGGTGATGCCACT
CGTTGACTACTTATGGATCGTCCCATCGACAGAAAGTTTGAGTAAAGGAA
ATTACCAAGAATTTTCGACTGACTTTTTGTTCGTCAATCTTGAACAGAAT
TTTAGGAATTCTCAACAGATTGTTAAAGCAACCAAATCTGTAGCCGAGGA
GAAATATTATGACTACAAACAAGGGATCGTCATGCCACTTGGTAATTTTC
CGGATGGTTGCGAGCCAATATTTGTTGACACGTTCGAAGAAGCAGTGATA
GAAGCGAGAAAACGAACAAATGAAGGAATCCTTCTGATAAATAGTTACAG
AATCGATGCAAATTCTTATTCTGAGGTTCTAGATCGGTTGAACGAGAATT
ATAAAGTATATCACGGTACAAAAAATGATTTTAAAGAGGGAGAAAGTCCG
TATAAGTTTCTTCAGGAAGGAAACATTTTGATCATTGAGGAATTTACATC
TTTTGGATTTGACTGGCCGACAGTTATTGTATTAGAACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000090_pilon | genome | sc0000090_pilon:1184025..1186750 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2008-2208:202 |
| Aaloc | 1672-2004:535 |
| Aaloc | 1591-1671:631 |
| Aaloc | 1-1590:2727 |
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