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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:2149534..2151283- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041405 ID=XLOC_041405|Name=XLOC_041405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1750bp|location=Sequence derived from alignment at sc0000003_pilon:2149534..2151283- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTTACATGTTGCATTGATGCTGATTTTATCAACAGGTAAAAATTC
ATATGGAGGTTGGTTTGAAAAGAAACTATTGTTTCAATCTCTGACGACAT
AGATCCTAGGCTACACATTTTTTTATAAGAATGGTGTTTTTTTCATTTCA
TCATGGATATTCTTAATTTTTTTGCGAAAATCATCCTATAATATTCTTAC
GGTATTCTTAGGTTAAGATCGAAATTTAACCTGATTTTAACATGTAATAC
ACACCTGGAGAATATTGACCCTTAGGGTAGTATTATTGGCAATTTACAGG
TGAAAATGCTTTAAAAATGGCATTCTTAGGTTCAGTTGCTAAATTCCATG
ATGGTGTTATTCTAAGCATATTTTTAATCTTTTGGCCATTTTCATCACGG
ACACTCTTATAAAGTGTATTCTTATAAAAGAAAAGTGTGTATCTTAAATT
TCAAATGAGGGCACTACAACCTCTCTATCCAGGCTTATTGGTAGGGCCCC
CTCCCCACTGGAAAATTTGGTCAAAATTTCATCACCACTATTTGAAATCG
ATTTAAAATTTCTAAAAACATCCGCACTGGATTTTTGAGCTTTTGAAGAA
TAGATTTTCTATGCCCATTGTGATTTCGATAGAAATTTTTATCCCCAGGG
CTGTGGAATTTAGCTTGCTTACTTTAAAAAGATTACCTAATTTAGGTTGA
CATGATAAAGCTTATCCATCCAGCTGATGTTTTTGGTTCTAATTGTATCT
TTACAAATATAATAATTGTAGGTACGTTGAATTTCTTCCAGGCTGTTTTG
CTGAAAACTCGACTCTCAGCGATGATGTTGCTCAGACTCGTCAAAACAGC
ACATGGTATGGTGACTTCAACCAAACAAAGCCCATCGAAATCCAACATCT
GAATGGAACATCAGCAAACATCAGTATTGCCAGCAAAGCTTCATCTAAAG
AGCAAAACGTTACCATCAATTCTTTATCTAAAGATGAAACCAAGACAAAT
TCAACAAACGACATTATCAAAGCATTCTCAAATTTCACTTTGACAAATTC
AAGTTTAATCAACGAGACTGATAATGGTGTTGAAACCGTTGACAATTCTA
GTGGAGATAACGTCAATTTAAATGGTAATCCGTTGAATCAAACTGTAGCA
GAATATACAGGAGATAATAATTTAAACGAAACTATGGAAGGTGTAAAACA
AACTATATCAGGAGAAAAAGTAGAGAGCGAATCTCCGGAGAGCGAATCAG
CTATCTTCGGTAATCTAATGGACCAAACAGACGTTGTTAGTATAAAAAAT
ATCCACAAATTGTTTAAACCATTAACACGAAATCAAATTTCTTCCCCATA
TATCTATGCTTCTGAACCTAAACAAGGCTGGAAAGAGCTCCATAACCCAA
AGTCCTTTCGAAGCAAACCAACTTCTTTTTCAAATTCACAACAACAAGGA
GAGAAAAACATCATGATACAAGAATCGCAAAATAAGAAACCAAATTATAA
CAAAAAGAAACTAACCCATAAGCAAAGAAAGAATAAGAGTCACCAGATAT
CATATTTTCAACCCACAATGAAATGGCTACCCTTGTGTTGTCGAGATTCA
CTCGTGGCGCCCTTTTTCACATACAACCTACATATTATACCGCCACCTTG
TTGCAGGTTCAACCGACATTCGATTGTTCTTCCTCATTGCTGCAAATATT
TTGAGGACCCTGATGATATCGCCGCAAAAGGGGATCCAGAAAGTGATTAA
Coding sequence (CDS) from alignment at sc0000003_pilon:2149534..2151283- >XLOC_041405 ID=XLOC_041405|Name=XLOC_041405|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000003_pilon:2149534..2151283- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCTTACATGTTGCATTGATGCTGATTTTATCAACAGATGTTCTTAC
ATGTTGCATTGATGCTGATTTTATCAACAGGCTGTTTTGCTGAAAACTCG
ACTCTCAGCGATGATGTTGCTCAGACTCGTCAAAACAGCACATGGTATGG
TGACTTCAACCAAACAAAGCCCATCGAAATCCAACATCTGAATGGAACAT
CAGCAAACATCAGTATTGCCAGCAAAGCTTCATCTAAAGAGCAAAACGTT
ACCATCAATTCTTTATCTAAAGATGAAACCAAGACAAATTCAACAAACGA
CATTATCAAAGCATTCTCAAATTTCACTTTGACAAATTCAAGTTTAATCA
ACGAGACTGATAATGGTGTTGAAACCGTTGACAATTCTAGTGGAGATAAC
GTCAATTTAAATGGTAATCCGTTGAATCAAACTGTAGCAGAATATACAGG
AGATAATAATTTAAACGAAACTATGGAAGGTGTAAAACAAACTATATCAG
GAGAAAAAGTAGAGAGCGAATCTCCGGAGAGCGAATCAGCTATCTTCGGT
AATCTAATGGACCAAACAGACGTTGTTAGTATAAAAAATATCCACAAATT
GTTTAAACCATTAACACGAAATCAAATTTCTTCCCCATATATCTATGCTT
CTGAACCTAAACAAGGCTGGAAAGAGCTCCATAACCCAAAGTCCTTTCGA
AGCAAACCAACTTCTTTTTCAAATTCACAACAACAAGGAGAGAAAAACAT
CATGATACAAGAATCGCAAAATAAGAAACCAAATTATAACAAAAAGAAAC
TAACCCATAAGCAAAGAAAGAATAAGAGTCACCAGATATCATATTTTCAA
CCCACAATGAAATGGCTACCCTTGTGTTGTCGAGATTCACTCGTGGCGCC
CTTTTTCACATACAACCTACATATTATACCGCCACCTTGTTGCAGGTTCA
ACCGACATTCGATTGTTCTTCCTCATTGCTGCAAATATTTTGAGGACCCT
GATGATATCGCCGCAAAAGGGGATCCAGAAAGTGATTAAGCTGTTTTGCT
GAAAACTCGACTCTCAGCGATGATGTTGCTCAGACTCGTCAAAACAGCAC
ATGGTATGGTGACTTCAACCAAACAAAGCCCATCGAAATCCAACATCTGA
ATGGAACATCAGCAAACATCAGTATTGCCAGCAAAGCTTCATCTAAAGAG
CAAAACGTTACCATCAATTCTTTATCTAAAGATGAAACCAAGACAAATTC
AACAAACGACATTATCAAAGCATTCTCAAATTTCACTTTGACAAATTCAA
GTTTAATCAACGAGACTGATAATGGTGTTGAAACCGTTGACAATTCTAGT
GGAGATAACGTCAATTTAAATGGTAATCCGTTGAATCAAACTGTAGCAGA
ATATACAGGAGATAATAATTTAAACGAAACTATGGAAGGTGTAAAACAAA
CTATATCAGGAGAAAAAGTAGAGAGCGAATCTCCGGAGAGCGAATCAGCT
ATCTTCGGTAATCTAATGGACCAAACAGACGTTGTTAGTATAAAAAATAT
CCACAAATTGTTTAAACCATTAACACGAAATCAAATTTCTTCCCCATATA
TCTATGCTTCTGAACCTAAACAAGGCTGGAAAGAGCTCCATAACCCAAAG
TCCTTTCGAAGCAAACCAACTTCTTTTTCAAATTCACAACAACAAGGAGA
GAAAAACATCATGATACAAGAATCGCAAAATAAGAAACCAAATTATAACA
AAAAGAAACTAACCCATAAGCAAAGAAAGAATAAGAGTCACCAGATATCA
TATTTTCAACCCACAATGAAATGGCTACCCTTGTGTTGTCGAGATTCACT
CGTGGCGCCCTTTTTCACATACAACCTACATATTATACCGCCACCTTGTT
GCAGGTTCAACCGACATTCGATTGTTCTTCCTCATTGCTGCAAATATTTT
GAGGACCCTGATGATATCGCCGCAAAAGGGGATCCAGAAAGTGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:2149534..2151283 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 43-999:958 |
| Aaloc | 1-39:1751 |
|
