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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000266_pilon:330777..333026- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041385 ID=XLOC_041385|Name=XLOC_041385|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2250bp|location=Sequence derived from alignment at sc0000266_pilon:330777..333026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGTCAGAAGAATCACTGGCAAACAGTTCAAAACCACATTCCCAAC
ACGAACTATATTCACGGAGCTGGAACAAAAAGAGCTGAACCAACCACGAA
TCAAATGTCGTAATAGACCTTATCTGGCAGGCGCCAAATCCGACAAATTC
CCGGAATATATATCAATGAGTGTCAATAAATATTTCTCTGGTATCAAACT
AAAAGACCCTAAAAACACTCCACATATGAAAGATATAGCTTTGGAATTTC
GTAAACATATCGATGAGAACTTAAAAACTCACAGTGCTTTCCTACTAAAA
GGTTTACCAACAAACGGTGTTGATGAAATTCAAGATTTTATATCAGGAAT
GGAATATAAATCGTTTTATTATGATGCAGGGAATGCAGCAAGGAGTAGTG
TTGGTGAGTACCTGTACACAGCTTCGGATGAACCAAAAGATGTTTCAATC
GAACCTCATAATGAAATGGCATATTTGGAAACATTCCCGAGTAAGGTAAA
CCTTTTTAAAGTTGTTAAAGAATTTGTCGGATTATTTCAGCCATTGGGGG
GAGGGTAAAAATAAAGGACTATAAAACTATTAATTATTATATTTTTACGG
CTGTGGATTTAGATTTCATTATTTTCAAGTCAGGAATTTCAGTGGAGATG
GGGAAAAAAGCAGAACTTTTTGCAGTGAGGATTTTTTATTTGACTTTTTT
TCAGTGGAGACGAAAATTGGACTATTATTTTCCATCGGGGACGAAATTTT
GGGCAATTATTAAATTCGGAAAGGTCCCAGGTGCGGGCTGCGGGACAGGG
TGTAGTGATAATTCACTGTATTTATTCTGCGATAAAAAAATTTATTTTCA
GATAATGTTTTACTGTGCATCAGCAGCTGACTATGGAGGTGATTCACCAG
TTGTTTTTAATCGTGACATCAAAAAAAGTCTGGATACGAGTGACGTATAT
GAAAAAATGAATAAGAAGAAGATCAGATACATTCGTAATTTATCACATGA
GAAAAACTCACCATATTTAACATGGCAGGAGACATTCAAGACGAAAAGTG
AAGAGGTAATTTGATTATCCAGGGGCACTGACTTTGACGACCAACGGGGA
CTGCTGCCACTAAAGTTGAAAATTTTTCTAATTTTGACCCTGAAAATTGT
CCTAAATAAGCAAAAGTCGACCCTCTCAGATATACAGATATACATCTTGA
AAATTAGTGAATTCGAACCCTTTTAGGTATCTTCAGAGCCGGAAAAGGAA
ATCTGACCAGCGGTCCCATACCCAATTTTGCCAAAGTGTCTCCCACAGGT
GGAATTGTAAACAAACCTTTGATAGAGACACTAATGAGAGGATTTCATTA
ATTCACTATCCATAGAAAGCGGAGAAAGTCATGCAGCGTGAGAACATGGA
TTGGGAGTGGCAACACAACGGAGATCTTTCATTATGGAACACAGTGAGTG
CAACTACACAACACCCTGTAACGAAAGAAGAAATATGGTTTAATCAAGTC
ACGGCTGCACATTCATCTTACTATAAAGACATGTCAATTGTAAGTTATCT
TTCAAAACAATATTTCATCAGAAAGTTGTAGAGTCTGCTAAATCAAGCGC
CTCACGCGCCCACGCCATTTTTTCATGCGGCTTGAATTTTTTGACATACC
TTATATTCTTCACGCGCCTTTATTTTTCACGCGCCTTGATTATTTTCATG
CGCCCTTGAATTTTCACGCGCCCATATTTTCTACGCGCCTTAATTTTTTT
CACCCGCCCATATTTTCCAGGCGCTTTTAATTTTTTTTCACATGCGCCCT
AAAATTTTTACGCGCTCTAATTTTTCACGTGTCTTGATTCTTCACGTGCC
TTGATTTGTCACTTAAGAAATCCTTAAATTTAAGTTTCCCACAGTTTTAA
AAGAATTACTCGGGGGTCTCAATAAGAAGAGGGGTTCCGAAAATTTCTGA
AGAAAATTAATAAGCGGGGGAGACATTTATTCGCGACCTTAGAGTAATCC
TTTTCTTTTCCAGAATGTGAATAACCAACATTTACCGGCTAATCAATTTC
CATTACATACTTGTTACGGTGATGGTGAAGAAATAACCGACGAAGAGGTG
GATGAAATTCGTTCGGCCACGTGGTCAAATGCAATGTCGTTGAAATTACA
ACCTGGAGATGTTTTATTACTGGATAATTTATTGGCGTTACATTCAAGAA
TGAGCTATGAAGGAGGAGAAAGAAAAATATTGGTTAATTTAAGTTACTAA
Coding sequence (CDS) from alignment at sc0000266_pilon:330777..333026- >XLOC_041385 ID=XLOC_041385|Name=XLOC_041385|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000266_pilon:330777..333026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGGTCAGAAGAATCACTGGCAAACAGTTCAAAACCACATTCCCAAC
ACGAACTATATTCACGGAGCTGGAACAAAAAGAGCTGAACCAACCACGAA
TCAAATGTCGTAATAGACCTTATCTGGCAGGCGCCAAATCCGACAAATTC
CCGGAATATATATCAATGAGTGTCAATAAATATTTCTCTGGTATCAAACT
AAAAGACCCTAAAAACACTCCACATATGAAAGATATAGCTTTGGAATTTC
GTAAACATATCGATGAGAACTTAAAAACTCACAGTGCTTTCCTACTAAAA
GGTTTACCAACAAACGGTGTTGATGAAATTCAAGATTTTATATCAGGAAT
GGAATATAAATCGTTTTATTATGATGCAGGGAATGCAGCAAGGAGTAGTG
TTGGTGAGTACCTGTACACAGCTTCGGATGAACCAAAAGATGTTTCAATC
GAACCTCATAATGAAATGGCATATTTGGAAACATTCCCGAGTAAGATGCT
GGTCAGAAGAATCACTGGCAAACAGTTCAAAACCACATTCCCAACACGAA
CTATATTCACGGAGCTGGAACAAAAAGAGCTGAACCAACCACGAATCAAA
TGTCGTAATAGACCTTATCTGGCAGGCGCCAAATCCGACAAATTCCCGGA
ATATATATCAATGAGTGTCAATAAATATTTCTCTGGTATCAAACTAAAAG
ACCCTAAAAACACTCCACATATGAAAGATATAGCTTTGGAATTTCGTAAA
CATATCGATGAGAACTTAAAAACTCACAGTGCTTTCCTACTAAAAGGTTT
ACCAACAAACGGTGTTGATGAAATTCAAGATTTTATATCAGGAATGGAAT
ATAAATCGTTTTATTATGATGCAGGGAATGCAGCAAGGAGTAGTGTTGGT
GAGTACCTGTACACAGCTTCGGATGAACCAAAAGATGTTTCAATCGAACC
TCATAATGAAATGGCATATTTGGAAACATTCCCGAGTAAGATAATGTTTT
ACTGTGCATCAGCAGCTGACTATGGAGGTGATTCACCAGTTGTTTTTAAT
CGTGACATCAAAAAAAGTCTGGATACGAGTGACGTATATGAAAAAATGAA
TAAGAAGAAGATCAGATACATTCGTAATTTATCACATGAGAAAAACTCAC
CATATTTAACATGGCAGGAGACATTCAAGACGAAAAGTGAAGAGATAATG
TTTTACTGTGCATCAGCAGCTGACTATGGAGGTGATTCACCAGTTGTTTT
TAATCGTGACATCAAAAAAAGTCTGGATACGAGTGACGTATATGAAAAAA
TGAATAAGAAGAAGATCAGATACATTCGTAATTTATCACATGAGAAAAAC
TCACCATATTTAACATGGCAGGAGACATTCAAGACGAAAAGTGAAGAGAA
AGCGGAGAAAGTCATGCAGCGTGAGAACATGGATTGGGAGTGGCAACACA
ACGGAGATCTTTCATTATGGAACACAGTGAGTGCAACTACACAACACCCT
GTAACGAAAGAAGAAATATGGTTTAATCAAGTCACGGCTGCACATTCATC
TTACTATAAAGACATGTCAATTAAAGCGGAGAAAGTCATGCAGCGTGAGA
ACATGGATTGGGAGTGGCAACACAACGGAGATCTTTCATTATGGAACACA
GTGAGTGCAACTACACAACACCCTGTAACGAAAGAAGAAATATGGTTTAA
TCAAGTCACGGCTGCACATTCATCTTACTATAAAGACATGTCAATTAATG
TGAATAACCAACATTTACCGGCTAATCAATTTCCATTACATACTTGTTAC
GGTGATGGTGAAGAAATAACCGACGAAGAGGTGGATGAAATTCGTTCGGC
CACGTGGTCAAATGCAATGTCGTTGAAATTACAACCTGGAGATGTTTTAT
TACTGGATAATTTATTGGCGTTACATTCAAGAATGAGCTATGAAGGAGGA
GAAAGAAAAATATTGGTTAATTTAAGTTACTAAAATGTGAATAACCAACA
TTTACCGGCTAATCAATTTCCATTACATACTTGTTACGGTGATGGTGAAG
AAATAACCGACGAAGAGGTGGATGAAATTCGTTCGGCCACGTGGTCAAAT
GCAATGTCGTTGAAATTACAACCTGGAGATGTTTTATTACTGGATAATTT
ATTGGCGTTACATTCAAGAATGAGCTATGAAGGAGGAGAAAGAAAAATAT
TGGTTAATTTAAGTTACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266_pilon | genome | sc0000266_pilon:330777..333026 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 874-1110:238 |
| Aaloc | 700-873:886 |
| Aaloc | 496-699:1400 |
| Aaloc | 1-495:2251 |
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