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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000266_pilon:166046..168594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041384 ID=XLOC_041384|Name=XLOC_041384|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2549bp|location=Sequence derived from alignment at sc0000266_pilon:166046..168594- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTCGTTCGTATAGTATCGAAAAACCACGTCACGCCAGCCTTCTAGA
TCGCAACAACAATATACAACACCACGACAAATCATCCGATATCTCTCACA
ACACAAGCGATAATGAAAACGACAGAGTCGTACGTCAGTGGTTACAAGAA
ACCGTAACCGTCGTTAAACCTTTATCCGACAAAGACGACAGGAATGAAAC
GTTATGTCGGGTATGTGGCGATATATCGTCTGGTCGACACTACGGGCAAT
ACACTTGTGACGGATGTTCCGGATTTTTCATGCGGTCAGTCCGTAAGAAT
ATGACGTACCGTTGTAAAGGGAATAAAAGTTGTATCGTAGATAAGAAAAG
AAGGAATCAATGTCAAGCATGTCGATTCGAGAAATGTTTGGAAGTCAAAA
TGAATAGATACGGTAGGAGATTTTCCCATTCTACGGTTACTCCTTTTATA
AAGCTCCAACTCAAGGTGCATTGAAGAAGATGAAAAGTATTTGATACCTA
CATACTCAATCCTTAGAAGCTTAGCCTAAAGAAGGTTCTCAATACACATT
TCCAACCGTAGTCGCGCGGTCAGGCGCGTGCCACTCGATTATTTAATCAT
CCCGCTAAACTTCAGAAACTTTATCGAATCCTTTTTTGACGCCTTTTTCT
ATTGTCTATAGGTGCGAATAAAAGACTGGGACGGTTTTAGGGTGGTAAAA
CGGACAAAGAAAAGCCCACGCAGCAATCGGCGGCTACGGTTGAAAAGGTG
TATTACGTCTGCAATTTTGATGCGTTTGAAAAATACAGTTGACCCTTTCT
TATTCGATCTCCAAGGGACCAAGAACTTTTTCGGATTAGAGAAGATTCAA
ATTATGAACGAATTTAACAATACTTTAAAGCTGAGGGGACAATTTTTTCA
GCTCGAATTACAATAGAATTCGAAATATAGAGGTTCGAGACTACTAAATG
TACATCTTTTATTATTCGTTGAAAATTGAAAGTTATTTAATTATTTTGCA
ATGAACTTATAGCGGTGCAGCAAGAGCGACAGCCGAACAATCACTTCAGT
ATGCAGCATCATTCATTCCATGGGCTACCACCCTACCTCTATCCAAGGTC
AGTTGGTTACTACCCTCCACCACCCCCTCCTCCACGAAGTGGCCTGACCC
GGATAGGCGGGAGCTCACTTCCCACCATGCATGATATACGGGAACGACAT
CGAGAATTCAGGATCAATTACCAACACGCATCTACTTCTTCTTCCTTGAG
ACAATCACCTGGATGTGTCTCACCCCTACCTACCACTACCAAGATACAGA
CTCCTGTTAGTCCTCCACCAAGGCTCATAGAGGCCACGAAAATTAAAACA
GAGGATGCAGTACCAGTTCAAGCACCAGAAAAGCTAGAAGATATAGCGGC
TCGGTTATTATATCATACAATCAAATGGGCTCGGTCAGTACCTGCCTTCA
CAGAACTCTCCATTAGTGACCAAATCAGGCTGTTAGAAAACTCTTGGTCA
GATATTTTCGTTCTATTTGCATTCCAATGGAAACTGCTTATTGATTCTGG
TGAAATTACAAAATCTATTGAAGAGAGGCTTAAAGATGATGAAAATGGTC
AGATTCGAAATGAATTATCAGCAGAGTTGAAACACTTGCAAGAGATGGCT
GGCAAATTCCATTCATTTCATGTTTCAGAAGACGAATTCATTTACTTGAA
ATCTGTGGTATTGTTTAAACCAGGTAAAAAACAATGAAAGCTTTAATTTA
CAAAAAAAAGAACCACTGAATTTTTAATTGAGCCTCAATTGTTCTTACTT
TTTCGAGATATTCAAAATTAACCAAATTCAGTGTCGATATTTTCTTTCTA
GGTTTTGATCAAAATCGAACTGTATGATTGCAGTCTGCAGTTAGTAGTCT
GTTTCCTTGCATATCTGACGTTTTAGTAGTTTGTTTCTTTGCACCCTTTC
ATATCTGACGGTCAATAGTCAGGCAATGGGATTACAAGAAATTATATACT
GATAAACCCTTGCTATTCAAAAAAGGGATCGAGTTAACCAGAATGAAATC
ACGCTAAATGTAATTTCAGATAAAAATACAGTATTTGACATCGACCAACC
CTGTGAAACTGAAAGAAGAAAATCCTCTTGTGATCATAGTCCGTATAAAA
AAACTCTGGTCTGGAAGCGTATTGTTTTAACTTTTTTCCTCTTGGGATTG
GTTTAAGATTTAATCACATGATCAAAATTATACGGACTATGTTGTGTTGT
GAGGGCTCCTATGTGAATATATTTTAACTCCCTTCAATGAACACATGCTT
TCATTTTTAGAGGTACCAGGTCTGTTGGACCCACGACACATTGAGAGGTG
TCAAGACCGTGCTCAAATCATGCTCCGTGACCACGTGGTAGCCTGTACAC
CAGAACAACCTGCAAGATTTGGTAAACTACTTCTATTATTACCAGAGGTG
AAACGAATAACACCGAAGACCATTGAAGAAATATTATACCAACAGAATCT
AGGGACTTTCTCATTTGACACGCTCCTGGCTGATTTATTCAAACCCTAA Coding sequence (CDS) from alignment at sc0000266_pilon:166046..168594- >XLOC_041384 ID=XLOC_041384|Name=XLOC_041384|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2724bp|location=Sequence derived from alignment at sc0000266_pilon:166046..168594- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTCGTTCGTATAGTATCGAAAAACCACGTCACGCCAGCCTTCTAGA
TCGCAACAACAATATACAACACCACGACAAATCATCCGATATCTCTCACA
ACACAAGCGATAATGAAAACGACAGAGTCGTACGTCAGTGGTTACAAGAA
ACCGTAACCGTCGTTAAACCTTTATCCGACAAAGACGACAGGAATGAAAC
GTTATGTCGGGTATGTGGCGATATATCGTCTGGTCGACACTACGGGCAAT
ACACTTGTGACGGATGTTCCGGATTTTTCATGCGGTCAGTCCGTAAGAAT
ATGACGTACCGTTGTAAAGGGAATAAAAGTTGTATCGTAGATAAGAAAAG
AAGGAATCAATGTCAAGCATGTCGATTCGAGAAATGTTTGGAAGTCAAAA
TGAATAGATACGGAAACTCGTTCGTATAGTATCGAAAAACCACGTCACGC
CAGCCTTCTAGATCGCAACAACAATATACAACACCACGACAAATCATCCG
ATATCTCTCACAACACAAGCGATAATGAAAACGACAGAGTCGTACGTCAG
TGGTTACAAGAAACCGTAACCGTCGTTAAACCTTTATCCGACAAAGACGA
CAGGAATGAAACGTTATGTCGGGTATGTGGCGATATATCGTCTGGTCGAC
ACTACGGGCAATACACTTGTGACGGATGTTCCGGATTTTTCATGCGGTCA
GTCCGTAAGAATATGACGTACCGTTGTAAAGGGAATAAAAGTTGTATCGT
AGATAAGAAAAGAAGGAATCAATGTCAAGCATGTCGATTCGAGAAATGTT
TGGAAGTCAAAATGAATAGATACGCGGTGCAGCAAGAGCGACAGCCGAAC
AATCACTTCAGTATGCAGCATCATTCATTCCATGGGCTACCACCCTACCT
CTATCCAAGGTCAGTTGGTTACTACCCTCCACCACCCCCTCCTCCACGAA
GTGGCCTGACCCGGATAGGCGGGAGCTCACTTCCCACCATGCATGATATA
CGGGAACGACATCGAGAATTCAGGATCAATTACCAACACGCATCTACTTC
TTCTTCCTTGAGACAATCACCTGGATGTGTCTCACCCCTACCTACCACTA
CCAAGATACAGACTCCTGTTAGTCCTCCACCAAGGCTCATAGAGGCCACG
AAAATTAAAACAGAGGATGCAGTACCAGTTCAAGCACCAGAAAAGCTAGA
AGATATAGCGGCTCGGTTATTATATCATACAATCAAATGGGCTCGGTCAG
TACCTGCCTTCACAGAACTCTCCATTAGTGACCAAATCAGGCTGTTAGAA
AACTCTTGGTCAGATATTTTCGTTCTATTTGCATTCCAATGGAAACTGCT
TATTGATTCTGGTGAAATTACAAAATCTATTGAAGAGAGGCTTAAAGATG
ATGAAAATGGTCAGATTCGAAATGAATTATCAGCAGAGTTGAAACACTTG
CAAGAGATGGCTGGCAAATTCCATTCATTTCATGTTTCAGAAGACGAATT
CATTTACTTGAAATCTGTGGTATTGTTTAAACCAGCGGTGCAGCAAGAGC
GACAGCCGAACAATCACTTCAGTATGCAGCATCATTCATTCCATGGGCTA
CCACCCTACCTCTATCCAAGGTCAGTTGGTTACTACCCTCCACCACCCCC
TCCTCCACGAAGTGGCCTGACCCGGATAGGCGGGAGCTCACTTCCCACCA
TGCATGATATACGGGAACGACATCGAGAATTCAGGATCAATTACCAACAC
GCATCTACTTCTTCTTCCTTGAGACAATCACCTGGATGTGTCTCACCCCT
ACCTACCACTACCAAGATACAGACTCCTGTTAGTCCTCCACCAAGGCTCA
TAGAGGCCACGAAAATTAAAACAGAGGATGCAGTACCAGTTCAAGCACCA
GAAAAGCTAGAAGATATAGCGGCTCGGTTATTATATCATACAATCAAATG
GGCTCGGTCAGTACCTGCCTTCACAGAACTCTCCATTAGTGACCAAATCA
GGCTGTTAGAAAACTCTTGGTCAGATATTTTCGTTCTATTTGCATTCCAA
TGGAAACTGCTTATTGATTCTGGTGAAATTACAAAATCTATTGAAGAGAG
GCTTAAAGATGATGAAAATGGTCAGATTCGAAATGAATTATCAGCAGAGT
TGAAACACTTGCAAGAGATGGCTGGCAAATTCCATTCATTTCATGTTTCA
GAAGACGAATTCATTTACTTGAAATCTGTGGTATTGTTTAAACCAGAGGT
ACCAGGTCTGTTGGACCCACGACACATTGAGAGGTGTCAAGACCGTGCTC
AAATCATGCTCCGTGACCACGTGGTAGCCTGTACACCAGAACAACCTGCA
AGATTTGGTAAACTACTTCTATTATTACCAGAGGTGAAACGAATAACACC
GAAGACCATTGAAGAAATATTATACCAACAGAATCTAGGGACTTTCTCAT
TTGACACGCTCCTGGCTGATTTATTCAAACCCTAAAGGTACCAGGTCTGT
TGGACCCACGACACATTGAGAGGTGTCAAGACCGTGCTCAAATCATGCTC
CGTGACCACGTGGTAGCCTGTACACCAGAACAACCTGCAAGATTTGGTAA
ACTACTTCTATTATTACCAGAGGTGAAACGAATAACACCGAAGACCATTG
AAGAAATATTATACCAACAGAATCTAGGGACTTTCTCATTTGACACGCTC
CTGGCTGATTTATTCAAACCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266_pilon | genome | sc0000266_pilon:166046..168594 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1138-1374:238 |
| Aaloc | 427-1134:1536 |
| Aaloc | 13-423:2550 |
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