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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000370_pilon:253525..256966+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041369 ID=XLOC_041369|Name=XLOC_041369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3442bp|location=Sequence derived from alignment at sc0000370_pilon:253525..256966+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACCTTAAAAGAAATGGGCGTGGAGGCGGTGTGTAGAGTATACGA
CCCTTTCAACATACATGGAATGTCTTTGACAATGCTACTTAAACATGCTG
ATGGATGGGATTACACCCGGTTTCTTCTCCTACTCTCACCCTTTGATCGA
GATTTATTCAAAGATTTCCTCAACAACACTGGCTCTCGTGAGCCTTACAG
AATATTTACACCGGATGTCGCCGCCCTTAATCGAAATTCATTTTACTTGG
AAAATAATATGATCCAAGATATTGGAAATGCGCCCAACGACAGTGAAGCA
AACTTGTAAGTTATTCAATTAACATAGAAATCAGATCATTAAACTATTTA
GGGTGTCCTAAAAAGAAGTAATGTGTCAGACCACTTCTCCTACCATTATG
TTacatatcatttttttttttcaaacttaagaAAGAACAACTTTATCTAA
TTGATTTAAATAATGATtttatacttttcttttgactaaAAGTTACAGTC
ATCTAAAAAGGTCCATAAATGGCGATAAATTGATAAAGATGATGTACCAT
TTTAAAGagtttataacttttgatacagtAGAGATATGAAAAATCGGAAT
ATATATTTGTAATTATCGAGGTTTAAAGTTTCAGAAAAGTACACAATGAC
ATAATTTTATCTTCACCTTTTCCCTCTTCATTTCTCATTTTCAAGCTTAC
ATCATTCTGCTTAAAGTGTTCTTTCTAACGAGGTATTAATTTAAACGATA
CGGACTGActgccaatttttttggaatggGCTTTATATTCGTTGTGATAT
TTCGCATGGTTTAAGAAATACTATCAAAGTAAAATACAATCTAAAACATA
ATCAAATTTGTTTTCTCTTTGTATTTTAGGTCTTTCCTTTCGGCTGAatg
gagaaacaatgaaaatatctCATTTCGATATGAAGCATTTCCACAGAAGT
GGAAAAGGAAGATCATTCGAGTAACTTCTTCGATTTTCCCTCCCTATAAC
AATGTTCTTAAAGAGAAGCCGACGAAATTCGGACAATGTATAAATGCAGG
GCACCTTTGTCGCGTCCCCATCAAAAGAGGGAATATAACTGAAGGATGGA
GAGAGTGTTGTTGTGGGGGTATTGCTGTTTCTTTATTCGATCTGATCACC
AAACAGTTGAACATTAAATACGACCTGTATTTAGTGGAGGACAATAAATT
TGGTGGTAAGAATGTAACCGGTGGATGGAATGGAATGATCGGTGAATTGA
TCAACAATAAAGCAGATATTGCCATCAATGGCTTCAATCCTACACGTGAA
CGATTGAAAGAAGTTTCCTTCACTTCTGCATACCAACACGATTATCTCTC
CTTCGTCAAACGGAAATTATCTTTCGAAGAAATAGACTTTGTGAATTGGG
AATTCGTTCGAACAATGGAATCAGACCTTGCTTTGTGGATTCTTTTCTCC
ACTGTATTCTCGGCAACGTTCATTGTATTCTCCGAAAACATTGGCTATCT
TTTGAGaagcaagaaatatttttccacgAGAGAGGTGATGACTTATATTT
TTGGACTGGCGTTTCAACGAGACATGGGTGGTCGAAATCCACTGCGTTGG
GGAGGCAGGGTTGTGGCGCTAAGCTATGCAGCTTCTATGACTGTTATCAT
GACAACTTATACTGCCCACCTCACTGCAAAGAACATTCAAATTGTGCCCA
AAAATACCTTCCTTGGATTGAAGGACCAAAGggtaaaaaattaatgatta
tTTGAATATGTTTTATCTACCCACATTTTTACGCCATAGAattattatca
gatagaatgaattcatgcttttttcctcaaaatgaagcgtgtctgtaagg
ggtcccttagttgcaatgggaattcaattgcacgtgtgcaatgataatgt
catttctttgttcttatcgtattttaattgcatattttctcatgcttgga
ttcttttgaattctcaaaaaaattatgcacataatttgattattttcaac
tggaaatTTCGGGCACTTCTGTCCCCTCAATGCAAATAAGaattacatat
ttgaaatctgctcattttatagattcaccagtgttgaaaactatttgaaa
acgcactcttaagaaaagaaatttgggtatcaagttttcacctaaattag
ttaCTCTTTCCGTATagactaaaattgattttttaattttaggagttaaa
atcgatggaatcactaaatttcagctcctaaaattccagattttaagcta
aaatagatttgtaaatatcaatcgttttccaaaactaaaaatttcgttac
tgagaaaaaataccgtgcaaacccttataaaaagatttctatccacgcat
cagaTtttgagaaactgtttttacgaccaataGTCACTTTAACAAAGGGA
ATCTGAATAGATGATGAAGTAGCCAAAGTGAGAtattattctatctgata
acAAACAGTTCACTGTTTACACTGTAACATTTTTGGAGAAACACGATGGC
AGGTTATGGTTGAAATGAAAGCCTTGTTTCCGTTTTCGAAATAAATTTTA
TCAATCAATTATCGTCGAcagtttcatatgaaaaattAGCTTAAAATATC
GCCCCCCTCCCCTTATAAATAACTCTATTGCTAAGATTAGCTTTCTGAAA
GATGGCTGTTTATTTTATTGAGAAGGAAAAATTGTGATAAATCATAGATT
TGTATTAATTTTACAGTTGTTAAAGCCGACGGACGATTTCAAGATTGCTC
TGATGAGTGCAACATCCTTTGAAGCTATGTTTCGAGATGGTTCAGAAGAT
TATAAACGTTTTTGGGCCTTCTCCAAGAAATATGCTGTCTCCTCGAACAG
TGAAGGAGTAGAAAAAGTGTACACTGGGTGAGATACCGTCATATttccaa
tatattatgacctctTCAAAGTTTAAATAGTTTCATTTGACAGGCTTTAC
ACCAAGGTGGAATATCTAGCATTAAGAGCTATGAGCTTGGGGACTTCTAC
AATTATTTATCTCTTTAGAGAATTGGATGCGTTTATCATTGAAGCTATCG
CAAGCAGAACGATCACCTCGCATAGCAAATATTGTGAAAATCTGGAAGTT
TTTGTAGAAAACAAAACTCAAATGGAAGTCAGCTTTCCTTATCGAAAAGA
TTTCCCTCTTGGTGAAGAAATATCTCGTCAAATTCTTAAAGTAAGAGAAG
ACTATAAGATCAAAGACATAATTGAAAGATGGGTTTATATTCCCCAATGC
ACGTCATCGATGAAGAATTTCACAAAGTTTGATGTCAATTATTTCGGTGG
AATTATTTTCATCTGTGCAATCCTCCTTTTGGTTTCGATCTTTCTCATCT
TGGCGGAAAATTTTCATACACATGTCAAGATGCGCAGAAGAACTCGTTGT
CGACAAAGAAGCTCTACAAGTATCACTAACATTTCATTTTAA Coding sequence (CDS) from alignment at sc0000370_pilon:253525..256966+ >XLOC_041369 ID=XLOC_041369|Name=XLOC_041369|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3486bp|location=Sequence derived from alignment at sc0000370_pilon:253525..256966+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAACCTTAAAAGAAATGGGCGTGGAGGCGGTGTGTAGAGTATACGA
CCCTTTCAACATACATGGAATGTCTTTGACAATGCTACTTAAACATGCTG
ATGGATGGGATTACACCCGGTTTCTTCTCCTACTCTCACCCTTTGATCGA
GATTTATTCAAAGATTTCCTCAACAACACTGGCTCTCGTGAGCCTTACAG
AATATTTACACCGGATGTCGCCGCCCTTAATCGAAATTCATTTTACTTGG
AAAATAATATGATCCAAGATATTGGAAATGCGCCCAACGACAGTGAAGCA
AACTTATGAGAACCTTAAAAGAAATGGGCGTGGAGGCGGTGTGTAGAGTA
TACGACCCTTTCAACATACATGGAATGTCTTTGACAATGCTACTTAAACA
TGCTGATGGATGGGATTACACCCGGTTTCTTCTCCTACTCTCACCCTTTG
ATCGAGATTTATTCAAAGATTTCCTCAACAACACTGGCTCTCGTGAGCCT
TACAGAATATTTACACCGGATGTCGCCGCCCTTAATCGAAATTCATTTTA
CTTGGAAAATAATATGATCCAAGATATTGGAAATGCGCCCAACGACAGTG
AAGCAAACTTGTCTTTCCTTTCGGCTGAatggagaaacaatgaaaatatc
tCATTTCGATATGAAGCATTTCCACAGAAGTGGAAAAGGAAGATCATTCG
AGTAACTTCTTCGATTTTCCCTCCCTATAACAATGTTCTTAAAGAGAAGC
CGACGAAATTCGGACAATGTATAAATGCAGGGCACCTTTGTCGCGTCCCC
ATCAAAAGAGGGAATATAACTGAAGGATGGAGAGAGTGTTGTTGTGGGGG
TATTGCTGTTTCTTTATTCGATCTGATCACCAAACAGTTGAACATTAAAT
ACGACCTGTATTTAGTGGAGGACAATAAATTTGGTGGTAAGAATGTAACC
GGTGGATGGAATGGAATGATCGGTGAATTGATCAACAATAAAGCAGATAT
TGCCATCAATGGCTTCAATCCTACACGTGAACGATTGAAAGAAGTTTCCT
TCACTTCTGCATACCAACACGATTATCTCTCCTTCGTCAAACGGAAATTA
TCTTTCGAAGAAATAGACTTTGTGAATTGGGAATTCGTTCGAACAATGGA
ATCAGACCTTGCTTTGTGGATTCTTTTCTCCACTGTATTCTCGGCAACGT
TCATTGTATTCTCCGAAAACATTGGCTATCTTTTGAGaagcaagaaatat
ttttccacgAGAGAGGTGATGACTTATATTTTTGGACTGGCGTTTCAACG
AGACATGGGTGGTCGAAATCCACTGCGTTGGGGAGGCAGGGTTGTGGCGC
TAAGCTATGCAGCTTCTATGACTGTTATCATGACAACTTATACTGCCCAC
CTCACTGCAAAGAACATTCAAATTGTGCCCAAAAATACCTTCCTTGGATT
GAAGGACCAAAGgGTCTTTCCTTTCGGCTGAatggagaaacaatgaaaat
atctCATTTCGATATGAAGCATTTCCACAGAAGTGGAAAAGGAAGATCAT
TCGAGTAACTTCTTCGATTTTCCCTCCCTATAACAATGTTCTTAAAGAGA
AGCCGACGAAATTCGGACAATGTATAAATGCAGGGCACCTTTGTCGCGTC
CCCATCAAAAGAGGGAATATAACTGAAGGATGGAGAGAGTGTTGTTGTGG
GGGTATTGCTGTTTCTTTATTCGATCTGATCACCAAACAGTTGAACATTA
AATACGACCTGTATTTAGTGGAGGACAATAAATTTGGTGGTAAGAATGTA
ACCGGTGGATGGAATGGAATGATCGGTGAATTGATCAACAATAAAGCAGA
TATTGCCATCAATGGCTTCAATCCTACACGTGAACGATTGAAAGAAGTTT
CCTTCACTTCTGCATACCAACACGATTATCTCTCCTTCGTCAAACGGAAA
TTATCTTTCGAAGAAATAGACTTTGTGAATTGGGAATTCGTTCGAACAAT
GGAATCAGACCTTGCTTTGTGGATTCTTTTCTCCACTGTATTCTCGGCAA
CGTTCATTGTATTCTCCGAAAACATTGGCTATCTTTTGAGaagcaagaaa
tatttttccacgAGAGAGGTGATGACTTATATTTTTGGACTGGCGTTTCA
ACGAGACATGGGTGGTCGAAATCCACTGCGTTGGGGAGGCAGGGTTGTGG
CGCTAAGCTATGCAGCTTCTATGACTGTTATCATGACAACTTATACTGCC
CACCTCACTGCAAAGAACATTCAAATTGTGCCCAAAAATACCTTCCTTGG
ATTGAAGGACCAAAGgTTGTTAAAGCCGACGGACGATTTCAAGATTGCTC
TGATGAGTGCAACATCCTTTGAAGCTATGTTTCGAGATGGTTCAGAAGAT
TATAAACGTTTTTGGGCCTTCTCCAAGAAATATGCTGTCTCCTCGAACAG
TGAAGGAGTAGAAAAAGTGTACACTGGTTGTTAAAGCCGACGGACGATTT
CAAGATTGCTCTGATGAGTGCAACATCCTTTGAAGCTATGTTTCGAGATG
GTTCAGAAGATTATAAACGTTTTTGGGCCTTCTCCAAGAAATATGCTGTC
TCCTCGAACAGTGAAGGAGTAGAAAAAGTGTACACTGGAGAATTGGATGC
GTTTATCATTGAAGCTATCGCAAGCAGAACGATCACCTCGCATAGCAAAT
ATTGTGAAAATCTGGAAGTTTTTGTAGAAAACAAAACTCAAATGGAAGTC
AGCTTTCCTTATCGAAAAGATTTCCCTCTTGGTGAAGAAATATCTCGTCA
AATTCTTAAAGTAAGAGAAGACTATAAGATCAAAGACATAATTGAAAGAT
GGGTTTATATTCCCCAATGCACGTCATCGATGAAGAATTTCACAAAGTTT
GATGTCAATTATTTCGGTGGAATTATTTTCATCTGTGCAATCCTCCTTTT
GGTTTCGATCTTTCTCATCTTGGCGGAAAATTTTCATACACATGTCAAGA
TGCGCAGAAGAACTCGTTGTCGACAAAGAAGCTCTACAAGTATCACTAAC
ATTTCATTTTAAAGAATTGGATGCGTTTATCATTGAAGCTATCGCAAGCA
GAACGATCACCTCGCATAGCAAATATTGTGAAAATCTGGAAGTTTTTGTA
GAAAACAAAACTCAAATGGAAGTCAGCTTTCCTTATCGAAAAGATTTCCC
TCTTGGTGAAGAAATATCTCGTCAAATTCTTAAAGTAAGAGAAGACTATA
AGATCAAAGACATAATTGAAAGATGGGTTTATATTCCCCAATGCACGTCA
TCGATGAAGAATTTCACAAAGTTTGATGTCAATTATTTCGGTGGAATTAT
TTTCATCTGTGCAATCCTCCTTTTGGTTTCGATCTTTCTCATCTTGGCGG
AAAATTTTCATACACATGTCAAGATGCGCAGAAGAACTCGTTGTCGACAA
AGAAGCTCTACAAGTATCACTAACATTTCATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000370_pilon | genome | sc0000370_pilon:253525..256966 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1321-1743:3020 |
| Aaloc | 1159-1317:2717 |
| Aaloc | 307-1158:881 |
| Aaloc | 1-303:1 |
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