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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000172_pilon:697111..699376+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041360 ID=XLOC_041360|Name=XLOC_041360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2266bp|location=Sequence derived from alignment at sc0000172_pilon:697111..699376+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAGACAGAAACGGCAAAGAAATGATATTGATGAGTTTCCTTACAG
AAGACCAAAACTGGACGACGATCAGGAGACATCCTGGGATGCTCAGTTGG
TGACGTCAGAATCCAAATCACCTGAAATGAATGAAAGAAATCAATCGGAA
CAAAATCTACAGTTTGGAGATATATTTTCAGCATGGCAACAGCAAAAATC
TGGTAAGAAATCTGTTGTACTTCTAAAATGATTTGTTTGAAACTCATTTG
ATGACGAGATCTCTGCTGtttttttCTTATCCAAATCCTTAAAGAATTCA
GTTGCCGATAAACATATCTACGCGTAATTTTCGGCTTTCATTTTATATGA
AAAGATCCGGTATCCAATACCAAgggataaaataaaatcttatcAATATC
ATTGATTTTGTTTCTCTAGAAAACAATGGCTCCAGCGTAAAAGAAGTTGA
TAGCGATAAAGCACCATACATAGTATTGGTTGGCAATGTAGGAAGTGGGA
AATCAACCATCGTTGAAAAACTAGCAGGTGTTGATGGTCGAAGCTCTTCA
TCAGCATCCAGTGCAACCAGATCTGCTGAATATTTCTTGACTCCTGATCA
AAGTCTTCTCATTGCTGACACTCCAGGAACCAATCCTCGAAAGGATAAAC
TGGAACATAATAATGAGATTGCAGCTGCATTGAGTTATCGAGAGGTTTCC
AAATTCATAGTAGTTGTGAAAGCAAGTCTACGTATGGACCAGACACTGGA
TGATATAAAGCAGTATTATGATCGATTTAATGCTCTCCCTGAAGATCTTG
TCGGTGTTTTGGTGACTCATATGGATCTCCACAAAGAATGGGATGAGGAA
GAAATATTGGAAGCTATTGACGAGGACTTCGAAATTACAGACGTCGTTTT
CTCAGATCGCCaaaaaaaGGGTTTCGACCTTTGCAAAGATGTTTTAAGAA
CATGCAGAAAAACTTTTGTAATAGATATGCAGAGTGACCTGTTTTCAAGA
CTTTTCAGGTTTAAGGATAGTAAtcgaaaaattctaaaagtcaCAAATGA
CTTCGTTAAACGATTTAAATCactcaaaaaaagttttgaggGTCAGAGAA
AGAACTTCGATGAAGCAGATCGGTGTCATCTTGATTGCGAGTTCTGGGCA
CTGTTCAAAACACATCTTACCGAAACAGCAAAACAGGACATGGTAAAtga
attgaatttcaattttgagaGGGAGACGAAAGATATGGAGGAAGGCTATC
TGATGAACATGGTCAATCAAACTAACGCCGCAATGAATGACATACAAATT
CGAATCGCTCGAAATCAAGATCCCTATGCATCCACCAAAAATTGCCCTCA
TTGCGGTAGGATTTGTGAAAATCCAAAAGCTCAAACATGTGGTAAACCAA
AGCGTATTGAGCTGTCAACAAATTCTCCATGTACAATGGCACATTTTACA
TTTAAAATCATTGACTACAGAAAAGTCGAAatacagaaaaaaagttttgg
tggTCAATTTCAGGATAACAAGACAGGATGTGGTCAAAAAATCAGCTGGA
ATGAAATGATGAAAGTTaatcatcaaaaaatcacaCAGATACAAAATCAG
GGTCCAGTAAAACAACCTGAATCTAATCAGCGTCCAGTGGAACAACCTAA
ATCTGACCATCACGCAGATACAAAAAGCAGACAAAAGACCAAGCCCAAAA
ATCAACAGCCATTAAGTACAAGTGACACACAACGCATCAATCATGGTAGA
TCTCTACCAAAGAAGAATCCTACAAAGCATACTCATACAGAACCACCCAG
ATATGTACACCAAAAAGAAGAGGCTCCGAATCAATCTTCACAACCCAACA
AAGGTGGAAGACAGAGATCAAACAACGACTTTAACCAAAACAATAAGTCG
GCGAAGTACCACCCATATGACTATTCAGAAGAGGCTCCGAATCAATCTTC
ACAACCCAACAAAGGTGGAAGACAGAAACCAAACAACGACTCAAACCAAA
ACAATAAGTCGGCGAAATACCACCCATATGACTATCCAGAAGAGActctg
aaccaatttacacAACCCAGCAAAGGTGAAAGAGGTATTTCAAACAACGA
CTCAAACCAAAACAATAAGTCGAGGAAATATCCACCAAAGGACTATCCAC
AAGAGACTCTGAATCAATCTTCACAACCCAGCAAAGGTGAAAGAGGCAGA
TCAAACAACGACTCAAACCAAAACAATAGATCGAAGAAGTACCCACCAAA
GGACAAACCAGAAGAT Coding sequence (CDS) from alignment at sc0000172_pilon:697111..699376+ >XLOC_041360 ID=XLOC_041360|Name=XLOC_041360|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4098bp|location=Sequence derived from alignment at sc0000172_pilon:697111..699376+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAGACAGAAACGGCAAAGAAATGATATTGATGAGTTTCCTTACAG
AAGACCAAAACTGGACGACGATCAGGAGACATCCTGGGATGCTCAGTTGG
TGACGTCAGAATCCAAATCACCTGAAATGAATGAAAGAAATCAATCGGAA
CAAAATCTACAGTTTGGAGATATATTTTCAGCATGGCAACAGCAAAAATC
TGATGGATAGACAGAAACGGCAAAGAAATGATATTGATGAGTTTCCTTAC
AGAAGACCAAAACTGGACGACGATCAGGAGACATCCTGGGATGCTCAGTT
GGTGACGTCAGAATCCAAATCACCTGAAATGAATGAAAGAAATCAATCGG
AACAAAATCTACAGTTTGGAGATATATTTTCAGCATGGCAACAGCAAAAA
TCTGAAAACAATGGCTCCAGCGTAAAAGAAGTTGATAGCGATAAAGCACC
ATACATAGTATTGGTTGGCAATGTAGGAAGTGGGAAATCAACCATCGTTG
AAAAACTAGCAGGTGTTGATGGTCGAAGCTCTTCATCAGCATCCAGTGCA
ACCAGATCTGCTGAATATTTCTTGACTCCTGATCAAAGTCTTCTCATTGC
TGACACTCCAGGAACCAATCCTCGAAAGGATAAACTGGAACATAATAATG
AGATTGCAGCTGCATTGAGTTATCGAGAGGTTTCCAAATTCATAGTAGTT
GTGAAAGCAAGTCTACGTATGGACCAGACACTGGATGATATAAAGCAGTA
TTATGATCGATTTAATGCTCTCCCTGAAGATCTTGTCGGTGTTTTGGTGA
CTCATATGGATCTCCACAAAGAATGGGATGAGGAAGAAATATTGGAAGCT
ATTGACGAGGACTTCGAAATTACAGACGTCGTTTTCTCAGATCGCCaaaa
aaaGGGTTTCGACCTTTGCAAAGATGTTTTAAGAACATGCAGAAAAACTT
TTGTAATAGATATGCAGAGTGACCTGTTTTCAAGACTTTTCAGGTTTAAG
GATAGTAAtcgaaaaattctaaaagtcaCAAATGACTTCGTTAAACGATT
TAAATCactcaaaaaaagttttgaggGTCAGAGAAAGAACTTCGATGAAG
CAGATCGGTGTCATCTTGATTGCGAGTTCTGGGCACTGTTCAAAACACAT
CTTACCGAAACAGCAAAACAGGACATGGTAAAtgaattgaatttcaattt
tgagaGGGAGACGAAAGATATGGAGGAAGGCTATCTGATGAACATGGTCA
ATCAAACTAACGCCGCAATGAATGACATACAAATTCGAATCGCTCGAAAT
CAAGATCCCTATGCATCCACCAAAAATTGCCCTCATTGCGGTAGGATTTG
TGAAAATCCAAAAGCTCAAACATGTGGTAAACCAAAGCGTATTGAGCTGT
CAACAAATTCTCCATGTACAATGGCACATTTTACATTTAAAATCATTGAC
TACAGAAAAGTCGAAatacagaaaaaaagttttggtggTCAATTTCAGGA
TAACAAGACAGGATGTGGTCAAAAAATCAGCTGGAATGAAATGATGAAAG
TTaatcatcaaaaaatcacaCAGATACAAAATCAGGGTCCAGTAAAACAA
CCTGAATCTAATCAGCGTCCAGTGGAACAACCTAAATCTGACCATCACGC
AGATACAAAAAGCAGACAAAAGACCAAGCCCAAAAATCAACAGCCATTAA
GTACAAGTGACACACAACGCATCAATCATGGTAGATCTCTACCAAAGAAG
AATCCTACAAAGCATACTCATACAGAACCACCCAGATATGTACACCAAAA
AGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGA
GATCAAACAACGACTTTAACCAAAACAATAAGTCGGCGAAGTACCACCCA
TATGACTATTCAGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGG
TGGAAGACAGAAACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGA
AATACCACCCATATGACTATCCAGAAGAGActctgaaccaatttacacAA
CCCAGCAAAGGTGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAA
TAAGTCGAGGAAATATCCACCAAAGGACTATCCACAAGAGACTCTGAATC
AATCTTCACAACCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCA
AACCAAAACAATAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGA
TAAAACAATGGCTCCAGCGTAAAAGAAGTTGATAGCGATAAAGCACCATA
CATAGTATTGGTTGGCAATGTAGGAAGTGGGAAATCAACCATCGTTGAAA
AACTAGCAGGTGTTGATGGTCGAAGCTCTTCATCAGCATCCAGTGCAACC
AGATCTGCTGAATATTTCTTGACTCCTGATCAAAGTCTTCTCATTGCTGA
CACTCCAGGAACCAATCCTCGAAAGGATAAACTGGAACATAATAATGAGA
TTGCAGCTGCATTGAGTTATCGAGAGGTTTCCAAATTCATAGTAGTTGTG
AAAGCAAGTCTACGTATGGACCAGACACTGGATGATATAAAGCAGTATTA
TGATCGATTTAATGCTCTCCCTGAAGATCTTGTCGGTGTTTTGGTGACTC
ATATGGATCTCCACAAAGAATGGGATGAGGAAGAAATATTGGAAGCTATT
GACGAGGACTTCGAAATTACAGACGTCGTTTTCTCAGATCGCCaaaaaaa
GGGTTTCGACCTTTGCAAAGATGTTTTAAGAACATGCAGAAAAACTTTTG
TAATAGATATGCAGAGTGACCTGTTTTCAAGACTTTTCAGGTTTAAGGAT
AGTAAtcgaaaaattctaaaagtcaCAAATGACTTCGTTAAACGATTTAA
ATCactcaaaaaaagttttgaggGTCAGAGAAAGAACTTCGATGAAGCAG
ATCGGTGTCATCTTGATTGCGAGTTCTGGGCACTGTTCAAAACACATCTT
ACCGAAACAGCAAAACAGGACATGGTAAAtgaattgaatttcaattttga
gaGGGAGACGAAAGATATGGAGGAAGGCTATCTGATGAACATGGTCAATC
AAACTAACGCCGCAATGAATGACATACAAATTCGAATCGCTCGAAATCAA
GATCCCTATGCATCCACCAAAAATTGCCCTCATTGCGGTAGGATTTGTGA
AAATCCAAAAGCTCAAACATGTGGTAAACCAAAGCGTATTGAGCTGTCAA
CAAATTCTCCATGTACAATGGCACATTTTACATTTAAAATCATTGACTAC
AGAAAAGTCGAAatacagaaaaaaagttttggtggTCAATTTCAGGATAA
CAAGACAGGATGTGGTCAAAAAATCAGCTGGAATGAAATGATGAAAGTTa
atcatcaaaaaatcacaCAGATACAAAATCAGGGTCCAGTAAAACAACCT
GAATCTAATCAGCGTCCAGTGGAACAACCTAAATCTGACCATCACGCAGA
TACAAAAAGCAGACAAAAGACCAAGCCCAAAAATCAACAGCCATTAAGTA
CAAGTGACACACAACGCATCAATCATGGTAGATCTCTACCAAAGAAGAAT
CCTACAAAGCATACTCATACAGAACCACCCAGATATGTACACCAAAAAGA
AGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAGAT
CAAACAACGACTTTAACCAAAACAATAAGTCGGCGAAGTACCACCCATAT
GACTATTCAGAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGG
AAGACAGAAACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAAAT
ACCACCCATATGACTATCCAGAAGAGActctgaaccaatttacacAACCC
AGCAAAGGTGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAATAA
GTCGAGGAAATATCCACCAAAGGACTATCCACAAGAGACTCTGAATCAAT
CTTCACAACCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCAAAC
CAAAACAATAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000172_pilon | genome | sc0000172_pilon:697111..699376 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 205-2049:422 |
| Aaloc | 1-201:1 |
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