XLOC_041358 (mRNA) -

Overview
NameXLOC_041358
Unique NameXLOC_041358
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000172_pilon:711350..712238-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041358 ID=XLOC_041358|Name=XLOC_041358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=889bp|location=Sequence derived from alignment at sc0000172_pilon:711350..712238- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCCAATATACAATGTTAAGAAATCAGAGGATGAGGTCGGTGAAAA ATATGACCGGTGTCTTACAAACACTATCACTCACTCGTTTACAGGAGCTG GTATTGGCGTGTTGGCGTCGTTAGTGTTATTTGGTCGTAAATCATGGCCA GTGACGTTCGGTGGTGCTTTTGGTCTTGGAATGGCATTTGGAAATTGTAG AAATGAATTTCGTAATATTTATCCCAAACAGAAACCCTTATCAGCTGTTA GTGAAGCTTTGACAAAGGATCTGGAGACTTCAGTTACGGTTGTTGCAGCT GAAACAACACCAGAGGTTTCTGAAGTTGTCACTGAAGCTGTGATATCTGT GGTTGAAGCTCCTGAATCACCTGTGACTACTGCACCAGTAGAAGAATCAT CTGAATAAACGGAACATGATAAAAAGTCACTTGAACTGGTGCGAAACTTT TGCAATGAATATTGTTATAACATTTAGACCCCCTAATGAAATACGCCTTA GAACACGAAAGATGATTAGACTTTAATGTGAAAATAACTCCATATCGAAA ACGACTACTTGCAACTTATTTGGAAATGGAGCTCCAGATTCTAATGTTCA TCTTGAAATGGTTTGTTAAATATAAAACAATAGACATTACTATTTCGAAC TTCTATTATTCGATAATTCGAAATAATTCAAGCTAATTCTCAAACTCAGT CTCCGTCAAAGGAAAACTGTCGAATAATGCTATCTATAGTTCAAATCTTT CGGTAATTCGAACAAATTAGACTTTCCGTTCGACATCGAATTAGTGTGAA TTAACTGTATGTACAAGCAATACGTACTCTTGGATCTTTCTTCTTTTTCA CAACCATCCCCCTCATCGATAACCAAGAGACTCTGGTTT

Coding sequence (CDS) from alignment at sc0000172_pilon:711350..712238-

>XLOC_041358 ID=XLOC_041358|Name=XLOC_041358|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=924bp|location=Sequence derived from alignment at sc0000172_pilon:711350..712238- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCCAATATACAATGTTAAGAAATCAGAGGATGAGGTCGGTGAAAA
ATATGACCGGTGTCTTACAAACACTATCACTCACTCGTTTACAGGAGCTG
GTATTGGCGTGTTGGCGTCGTTAGTGTTATTTGGTCGTAAATCATGGCCA
GTGACGTTCGGTGGTGCTTTTGGTCTTGGAATGGCATTTGGAAATTGTAG
AAATGAATTTCGTAATATTTATCCCAAACAGAAACCCTTATCAGCTGTTA
GTGAAGCTTTGACAAAGGATCTGGAGACTTCAGTTACGGTTGTTGCAGCT
GAAACAACACCAGAGGTTTCTGAAGTTGTCACTGAAGCTGTGATATCTGT
GGTTGAAGCTCCTGAATCACCTGTGACTACTGCACCAGTAGAAGAATCAT
ATGGCGCCAATATACAATGTTAAGAAATCAGAGGATGAGGTCGGTGAAAA
ATATGACCGGTGTCTTACAAACACTATCACTCACTCGTTTACAGGAGCTG
GTATTGGCGTGTTGGCGTCGTTAGTGTTATTTGGTCGTAAATCATGGCCA
GTGACGTTCGGTGGTGCTTTTGGTCTTGGAATGGCATTTGGAAATTGTAG
AAATGAATTTCGTAATATTTATCCCAAACAGAAACCCTTATCAGCTGTTA
GTGAAGCTTTGACAAAGGATCTGGAGACTTCAGTTACGGTTGTTGCAGCT
GAAACAACACCAGAGGTTTCTGAAGTTGTCACTGAAGCTGTGATATCTGT
GGTTGAAGCTCCTGAATCACCTGTGACTACTGCACCAGTAGAAGAATCAT
TCTTGGATCTTTCTTCTTTTTCACAACCATCCCCCTCATCGATAACCAAG
AGACTCTGGTTTTCTTGGATCTTTCTTCTTTTTCACAACCATCCCCCTCA
TCGATAACCAAGAGACTCTGGTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_041358XLOC_041358-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000172_pilongenomesc0000172_pilon:711350..712238 -
Properties
Property NameValue
Aaloc403-462:61
Aaloc1-399:890